RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
NDC80-201ENST00000261597 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
NDC80-201ENST00000261597 CUL7Q14999 1698 aa10.74□□□□□ -0.69
NDC80-201ENST00000261597 AQRO60306 1485 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■■■■■ 35.7
NDC80-201ENST00000261597 ZNF608Q9ULD9 1512 aaPredicted RBP10.71□□□□□ -0.69
NDC80-201ENST00000261597 GRIN2BQ13224 1484 aa10.71□□□□□ -0.7
NDC80-201ENST00000261597 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
NDC80-201ENST00000261597 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
NDC80-201ENST00000261597 EIF4G3O43432 1585 aaKnown RBP10.67□□□□□ -0.7
NDC80-201ENST00000261597 FHAD1B1AJZ9 1412 aa10.67□□□□□ -0.7
NDC80-201ENST00000261597 CLIP1P30622 1438 aa10.65□□□□□ -0.7
NDC80-201ENST00000261597 ADAMTS12P58397 1594 aa10.64□□□□□ -0.71
NDC80-201ENST00000261597 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
NDC80-201ENST00000261597 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
NDC80-201ENST00000261597 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
NDC80-201ENST00000261597 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
NDC80-201ENST00000261597 CTTNBP2Q8WZ74 1663 aa10.59□□□□□ -0.71
NDC80-201ENST00000261597 RANGAP1P46060 587 aaPredicted RBP10.59□□□□□ -0.71
NDC80-201ENST00000261597 SYNJ2O15056 1496 aa10.59□□□□□ -0.71
NDC80-201ENST00000261597 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
NDC80-201ENST00000261597 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
NDC80-201ENST00000261597 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
NDC80-201ENST00000261597 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
NDC80-201ENST00000261597 ARAP1Q96P48 1450 aa10.54□□□□□ -0.72
NDC80-201ENST00000261597 FBLN2P98095 1184 aa10.53□□□□□ -0.72
NDC80-201ENST00000261597 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
NDC80-201ENST00000261597 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
NDC80-201ENST00000261597 IQGAP2Q13576 1575 aa10.52□□□□□ -0.73
NDC80-201ENST00000261597 NUP160Q12769 1436 aa10.5□□□□□ -0.73
NDC80-201ENST00000261597 CEP170Q5SW79 1584 aa10.49□□□□□ -0.73
NDC80-201ENST00000261597 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
NDC80-201ENST00000261597 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
NDC80-201ENST00000261597 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
NDC80-201ENST00000261597 APLP2Q06481 763 aa10.47□□□□□ -0.73
NDC80-201ENST00000261597 CHD1O14646 1710 aa10.46□□□□□ -0.74
NDC80-201ENST00000261597 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.74
NDC80-201ENST00000261597 FMN1Q68DA7 1419 aa10.45□□□□□ -0.74
NDC80-201ENST00000261597 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
NDC80-201ENST00000261597 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
NDC80-201ENST00000261597 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
NDC80-201ENST00000261597 DISP1Q96F81 1524 aa10.41□□□□□ -0.74
NDC80-201ENST00000261597 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
NDC80-201ENST00000261597 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
NDC80-201ENST00000261597 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
NDC80-201ENST00000261597 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
NDC80-201ENST00000261597 MAP3K1Q13233 1512 aa10.4□□□□□ -0.74
NDC80-201ENST00000261597 FYCO1Q9BQS8 1478 aa10.4□□□□□ -0.74
NDC80-201ENST00000261597 PCF11O94913 1555 aaKnown RBP10.38□□□□□ -0.75
NDC80-201ENST00000261597 PCGF6Q9BYE7 350 aa10.38□□□□□ -0.75
NDC80-201ENST00000261597 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
NDC80-201ENST00000261597 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
NDC80-201ENST00000261597 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
NDC80-201ENST00000261597 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
NDC80-201ENST00000261597 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
NDC80-201ENST00000261597 KANK4Q5T7N3 995 aaPredicted RBP10.35□□□□□ -0.75
NDC80-201ENST00000261597 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
NDC80-201ENST00000261597 CFAP43Q8NDM7 1665 aa10.33□□□□□ -0.76
NDC80-201ENST00000261597 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
NDC80-201ENST00000261597 HECW1Q76N89 1606 aa10.32□□□□□ -0.76
NDC80-201ENST00000261597 LRRC9Q6ZRR7 1453 aa10.32□□□□□ -0.76
NDC80-201ENST00000261597 CCDC18Q5T9S5 1454 aa10.31□□□□□ -0.76
NDC80-201ENST00000261597 RAPGEF6Q8TEU7 1601 aa10.3□□□□□ -0.76
NDC80-201ENST00000261597 PTPRGP23470 1445 aa10.3□□□□□ -0.76
NDC80-201ENST00000261597 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
NDC80-201ENST00000261597 EPRSP07814 1512 aaKnown RBP10.29□□□□□ -0.76
NDC80-201ENST00000261597 FKBP8Q14318 412 aa10.29□□□□□ -0.76
NDC80-201ENST00000261597 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
NDC80-201ENST00000261597 PLB1Q6P1J6 1458 aa10.27□□□□□ -0.77
NDC80-201ENST00000261597 ABCA8O94911 1581 aa10.27□□□□□ -0.77
NDC80-201ENST00000261597 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
NDC80-201ENST00000261597 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
NDC80-201ENST00000261597 CDK11AQ9UQ88 783 aaPredicted RBP10.25□□□□□ -0.77
NDC80-201ENST00000261597 CDK13Q14004 1512 aaKnown RBP10.24□□□□□ -0.77
NDC80-201ENST00000261597 EHBP1L1Q8N3D4 1523 aa10.24□□□□□ -0.77
NDC80-201ENST00000261597 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
NDC80-201ENST00000261597 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
NDC80-201ENST00000261597 RRBP1Q9P2E9 1410 aaKnown RBP10.23□□□□□ -0.77
NDC80-201ENST00000261597 ARID3CA6NKF2 412 aa10.22□□□□□ -0.77
NDC80-201ENST00000261597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
NDC80-201ENST00000261597 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
NDC80-201ENST00000261597 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
NDC80-201ENST00000261597 MAGI3Q5TCQ9 1506 aa10.21□□□□□ -0.77
NDC80-201ENST00000261597 ATP10BO94823 1461 aa10.21□□□□□ -0.77
NDC80-201ENST00000261597 PHLDB1Q86UU1 1377 aa10.21□□□□□ -0.78
NDC80-201ENST00000261597 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
NDC80-201ENST00000261597 UHRF1BP1LA0JNW5 1464 aa10.2□□□□□ -0.78
NDC80-201ENST00000261597 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
NDC80-201ENST00000261597 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
NDC80-201ENST00000261597 CCNB3Q8WWL7 1395 aa10.19□□□□□ -0.78
NDC80-201ENST00000261597 PLEKHD1A6NEE1 506 aa10.19□□□□□ -0.78
NDC80-201ENST00000261597 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
NDC80-201ENST00000261597 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
NDC80-201ENST00000261597 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
NDC80-201ENST00000261597 MYOM3Q5VTT5 1437 aa10.16□□□□□ -0.78
NDC80-201ENST00000261597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
NDC80-201ENST00000261597 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
NDC80-201ENST00000261597 FGD6Q6ZV73 1430 aa10.15□□□□□ -0.78
NDC80-201ENST00000261597 KDM5BQ9UGL1 1544 aa10.15□□□□□ -0.79
NDC80-201ENST00000261597 ADCY10Q96PN6 1610 aa10.14□□□□□ -0.79
NDC80-201ENST00000261597 MIA2Q96PC5 1412 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms