RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 SETD5Q9C0A6 1442 aa22.87■■□□□ 1.25
SNCAIP-202ENST00000261368 IGF1RP08069 1367 aa22.84■■□□□ 1.25
SNCAIP-202ENST00000261368 TSHZ2Q9NRE2 1034 aa22.83■■□□□ 1.24
SNCAIP-202ENST00000261368 ARID3CA6NKF2 412 aa22.81■■□□□ 1.24
SNCAIP-202ENST00000261368 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
SNCAIP-202ENST00000261368 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
SNCAIP-202ENST00000261368 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
SNCAIP-202ENST00000261368 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
SNCAIP-202ENST00000261368 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
SNCAIP-202ENST00000261368 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
SNCAIP-202ENST00000261368 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
SNCAIP-202ENST00000261368 CFTRP13569 1480 aa22.73■■□□□ 1.23
SNCAIP-202ENST00000261368 MTUS2Q5JR59 1369 aa22.7■■□□□ 1.22
SNCAIP-202ENST00000261368 IRX6P78412 446 aaPredicted RBP22.7■■□□□ 1.22
SNCAIP-202ENST00000261368 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
SNCAIP-202ENST00000261368 PPP1R15AO75807 674 aaPredicted RBP22.68■■□□□ 1.22
SNCAIP-202ENST00000261368 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
SNCAIP-202ENST00000261368 HNRNPUQ00839 825 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNCAIP-202ENST00000261368 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
SNCAIP-202ENST00000261368 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
SNCAIP-202ENST00000261368 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
SNCAIP-202ENST00000261368 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
SNCAIP-202ENST00000261368 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
SNCAIP-202ENST00000261368 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
SNCAIP-202ENST00000261368 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
SNCAIP-202ENST00000261368 MAPKBP1O60336 1514 aa22.59■■□□□ 1.21
SNCAIP-202ENST00000261368 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SNCAIP-202ENST00000261368 ANP32EQ9BTT0 268 aa22.56■■□□□ 1.2
SNCAIP-202ENST00000261368 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
SNCAIP-202ENST00000261368 TIMELESSQ9UNS1 1208 aa22.53■■□□□ 1.2
SNCAIP-202ENST00000261368 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
SNCAIP-202ENST00000261368 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
SNCAIP-202ENST00000261368 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
SNCAIP-202ENST00000261368 RBM19Q9Y4C8 960 aaKnown RBP22.47■■□□□ 1.19
SNCAIP-202ENST00000261368 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
SNCAIP-202ENST00000261368 FOXD1Q16676 465 aa22.46■■□□□ 1.19
SNCAIP-202ENST00000261368 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
SNCAIP-202ENST00000261368 ZNF326Q5BKZ1 582 aaKnown RBP22.44■■□□□ 1.18
SNCAIP-202ENST00000261368 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
SNCAIP-202ENST00000261368 CCDC18Q5T9S5 1454 aa22.41■■□□□ 1.18
SNCAIP-202ENST00000261368 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
SNCAIP-202ENST00000261368 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
SNCAIP-202ENST00000261368 FGD6Q6ZV73 1430 aa22.4■■□□□ 1.18
SNCAIP-202ENST00000261368 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNCAIP-202ENST00000261368 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
SNCAIP-202ENST00000261368 MRS2Q9HD23 443 aa22.34■■□□□ 1.17
SNCAIP-202ENST00000261368 MAP3K1Q13233 1512 aa22.34■■□□□ 1.17
SNCAIP-202ENST00000261368 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
SNCAIP-202ENST00000261368 NESP48681 1621 aa22.33■■□□□ 1.17
SNCAIP-202ENST00000261368 FYCO1Q9BQS8 1478 aa22.3■■□□□ 1.16
SNCAIP-202ENST00000261368 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
SNCAIP-202ENST00000261368 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
SNCAIP-202ENST00000261368 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
SNCAIP-202ENST00000261368 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
SNCAIP-202ENST00000261368 PTPRKQ15262 1439 aa22.26■■□□□ 1.15
SNCAIP-202ENST00000261368 MPHOSPH9Q99550 1183 aa22.24■■□□□ 1.15
SNCAIP-202ENST00000261368 SLC4A1APQ9BWU0 796 aaKnown RBP22.23■■□□□ 1.15
SNCAIP-202ENST00000261368 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
SNCAIP-202ENST00000261368 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
SNCAIP-202ENST00000261368 TOPBP1Q92547 1522 aa22.22■■□□□ 1.15
SNCAIP-202ENST00000261368 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
SNCAIP-202ENST00000261368 B4GALNT3Q6L9W6 998 aa22.21■■□□□ 1.15
SNCAIP-202ENST00000261368 MYOM3Q5VTT5 1437 aa22.2■■□□□ 1.14
SNCAIP-202ENST00000261368 HFM1A2PYH4 1435 aa22.19■■□□□ 1.14
SNCAIP-202ENST00000261368 NAIPQ13075 1403 aa22.18■■□□□ 1.14
SNCAIP-202ENST00000261368 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
SNCAIP-202ENST00000261368 EFCAB5A4FU69 1503 aa22.16■■□□□ 1.14
SNCAIP-202ENST00000261368 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
SNCAIP-202ENST00000261368 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
SNCAIP-202ENST00000261368 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.14
SNCAIP-202ENST00000261368 FBLN2P98095 1184 aa22.14■■□□□ 1.14
SNCAIP-202ENST00000261368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.14■■□□□ 1.13
SNCAIP-202ENST00000261368 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
SNCAIP-202ENST00000261368 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
SNCAIP-202ENST00000261368 PPP4R2Q9NY27 417 aa22.09■■□□□ 1.13
SNCAIP-202ENST00000261368 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
SNCAIP-202ENST00000261368 C11orf95C9JLR9 678 aaPredicted RBP22.09■■□□□ 1.13
SNCAIP-202ENST00000261368 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
SNCAIP-202ENST00000261368 ZNF644Q9H582 1327 aaPredicted RBP22.08■■□□□ 1.12
SNCAIP-202ENST00000261368 PTPN23Q9H3S7 1636 aa22.07■■□□□ 1.12
SNCAIP-202ENST00000261368 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
SNCAIP-202ENST00000261368 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
SNCAIP-202ENST00000261368 NBPF8Q3BBV2 869 aa22.03■■□□□ 1.12
SNCAIP-202ENST00000261368 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
SNCAIP-202ENST00000261368 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.11
SNCAIP-202ENST00000261368 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
SNCAIP-202ENST00000261368 MSH5O43196 834 aa22.01■■□□□ 1.11
SNCAIP-202ENST00000261368 CFDP1Q9UEE9 299 aaPredicted RBP22■■□□□ 1.11
SNCAIP-202ENST00000261368 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
SNCAIP-202ENST00000261368 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
SNCAIP-202ENST00000261368 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
SNCAIP-202ENST00000261368 CNTLNQ9NXG0 1405 aa21.97■■□□□ 1.11
SNCAIP-202ENST00000261368 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
SNCAIP-202ENST00000261368 CUL7Q14999 1698 aa21.97■■□□□ 1.11
SNCAIP-202ENST00000261368 PDS5BQ9NTI5 1447 aa21.96■■□□□ 1.11
SNCAIP-202ENST00000261368 NBR1Q14596 966 aa21.96■■□□□ 1.11
SNCAIP-202ENST00000261368 SUPT6HQ7KZ85 1726 aaKnown RBP21.96■■□□□ 1.11
SNCAIP-202ENST00000261368 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
SNCAIP-202ENST00000261368 EHBP1L1Q8N3D4 1523 aa21.94■■□□□ 1.1
SNCAIP-202ENST00000261368 CDK13Q14004 1512 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms