RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
SNCAIP-201ENST00000261367 POLR3GLQ9BT43 218 aa11.1□□□□□ -0.63
SNCAIP-201ENST00000261367 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-201ENST00000261367 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-201ENST00000261367 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.09□□□□□ -0.63
SNCAIP-201ENST00000261367 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
SNCAIP-201ENST00000261367 BAZ1BQ9UIG0 1483 aaKnown RBP11.07□□□□□ -0.64
SNCAIP-201ENST00000261367 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
SNCAIP-201ENST00000261367 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
SNCAIP-201ENST00000261367 CDK11BP21127 795 aaKnown RBP11.07□□□□□ -0.64
SNCAIP-201ENST00000261367 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
SNCAIP-201ENST00000261367 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
SNCAIP-201ENST00000261367 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
SNCAIP-201ENST00000261367 CCER2I3L3R5 266 aa11.04□□□□□ -0.64
SNCAIP-201ENST00000261367 KIF21BO75037 1637 aa11.04□□□□□ -0.64
SNCAIP-201ENST00000261367 NCAPD3P42695 1498 aa11.03□□□□□ -0.64
SNCAIP-201ENST00000261367 TONSLQ96HA7 1378 aa11.02□□□□□ -0.64
SNCAIP-201ENST00000261367 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
SNCAIP-201ENST00000261367 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.65
SNCAIP-201ENST00000261367 DDX10Q13206 875 aaKnown RBP11.01□□□□□ -0.65
SNCAIP-201ENST00000261367 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
SNCAIP-201ENST00000261367 TNIKQ9UKE5 1360 aa11.01□□□□□ -0.65
SNCAIP-201ENST00000261367 GOLGA6L22H0YM25 854 aa11.01□□□□□ -0.65
SNCAIP-201ENST00000261367 FAM50AQ14320 339 aaKnown RBP11□□□□□ -0.65
SNCAIP-201ENST00000261367 PRDM2Q13029 1718 aa11□□□□□ -0.65
SNCAIP-201ENST00000261367 PTMSP20962 102 aa10.98□□□□□ -0.65
SNCAIP-201ENST00000261367 EEA1Q15075 1411 aa10.98□□□□□ -0.65
SNCAIP-201ENST00000261367 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
SNCAIP-201ENST00000261367 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
SNCAIP-201ENST00000261367 CUX1P39880 1505 aa10.97□□□□□ -0.65
SNCAIP-201ENST00000261367 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
SNCAIP-201ENST00000261367 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
SNCAIP-201ENST00000261367 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
SNCAIP-201ENST00000261367 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
SNCAIP-201ENST00000261367 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
SNCAIP-201ENST00000261367 IPO9Q96P70 1041 aaKnown RBP10.93□□□□□ -0.66
SNCAIP-201ENST00000261367 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
SNCAIP-201ENST00000261367 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
SNCAIP-201ENST00000261367 CFTRP13569 1480 aa10.92□□□□□ -0.66
SNCAIP-201ENST00000261367 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
SNCAIP-201ENST00000261367 PKNOX2Q96KN3 472 aa10.91□□□□□ -0.66
SNCAIP-201ENST00000261367 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
SNCAIP-201ENST00000261367 PRXQ9BXM0 1461 aa10.89□□□□□ -0.67
SNCAIP-201ENST00000261367 TCERG1O14776 1098 aaKnown RBP10.88□□□□□ -0.67
SNCAIP-201ENST00000261367 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
SNCAIP-201ENST00000261367 AEBP2Q6ZN18 517 aaPredicted RBP10.87□□□□□ -0.67
SNCAIP-201ENST00000261367 MSNP26038 577 aaKnown RBP10.87□□□□□ -0.67
SNCAIP-201ENST00000261367 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
SNCAIP-201ENST00000261367 LAS1LQ9Y4W2 734 aaKnown RBP10.86□□□□□ -0.67
SNCAIP-201ENST00000261367 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-201ENST00000261367 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
SNCAIP-201ENST00000261367 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-201ENST00000261367 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
SNCAIP-201ENST00000261367 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
SNCAIP-201ENST00000261367 CHAF1AQ13111 956 aaPredicted RBP10.83□□□□□ -0.68
SNCAIP-201ENST00000261367 CLIP1P30622 1438 aa10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 PTMAP06454 111 aaKnown RBP10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 UBE2Q2Q8WVN8 375 aa10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
SNCAIP-201ENST00000261367 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.68
SNCAIP-201ENST00000261367 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-201ENST00000261367 MTERF4Q7Z6M4 381 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-201ENST00000261367 GSE1Q14687 1217 aa10.8□□□□□ -0.68
SNCAIP-201ENST00000261367 PODXL2Q9NZ53 605 aa10.78□□□□□ -0.68
SNCAIP-201ENST00000261367 VPS8Q8N3P4 1428 aa10.78□□□□□ -0.68
SNCAIP-201ENST00000261367 GOLGA6L3A6NEY3 463 aa10.77□□□□□ -0.68
SNCAIP-201ENST00000261367 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
SNCAIP-201ENST00000261367 ARXQ96QS3 562 aa10.76□□□□□ -0.69
SNCAIP-201ENST00000261367 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
SNCAIP-201ENST00000261367 B4GALNT3Q6L9W6 998 aa10.73□□□□□ -0.69
SNCAIP-201ENST00000261367 GBP4Q96PP9 640 aa10.72□□□□□ -0.69
SNCAIP-201ENST00000261367 WDR97A6NE52 1622 aa10.72□□□□□ -0.69
SNCAIP-201ENST00000261367 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
SNCAIP-201ENST00000261367 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNCAIP-201ENST00000261367 TPM2P07951 284 aa10.71□□□□□ -0.69
SNCAIP-201ENST00000261367 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
SNCAIP-201ENST00000261367 MS4A1P11836 297 aa10.7□□□□□ -0.7
SNCAIP-201ENST00000261367 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
SNCAIP-201ENST00000261367 RRP9O43818 475 aaKnown RBP10.7□□□□□ -0.7
SNCAIP-201ENST00000261367 NRDCO43847 1150 aa10.69□□□□□ -0.7
SNCAIP-201ENST00000261367 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
SNCAIP-201ENST00000261367 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
SNCAIP-201ENST00000261367 TNNT3P45378 269 aaPredicted RBP10.69□□□□□ -0.7
SNCAIP-201ENST00000261367 IGF1RP08069 1367 aa10.69□□□□□ -0.7
SNCAIP-201ENST00000261367 NESP48681 1621 aa10.68□□□□□ -0.7
SNCAIP-201ENST00000261367 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
SNCAIP-201ENST00000261367 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
SNCAIP-201ENST00000261367 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
SNCAIP-201ENST00000261367 MYH16Q9H6N6 1097 aa10.67□□□□□ -0.7
SNCAIP-201ENST00000261367 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 KIF27Q86VH2 1401 aa10.66□□□□□ -0.7
SNCAIP-201ENST00000261367 SKOR2Q2VWA4 1001 aaPredicted RBP10.65□□□□□ -0.7
SNCAIP-201ENST00000261367 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms