RNA–Protein interactions for RNA: ENST00000260502.10

BCAR3-201, Transcript of BCAR3, NSP family adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCAR3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-201ENST00000260502 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
BCAR3-201ENST00000260502 FHOD3Q2V2M9 1422 aa23.2■■□□□ 1.31
BCAR3-201ENST00000260502 TOPBP1Q92547 1522 aa23.2■■□□□ 1.31
BCAR3-201ENST00000260502 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
BCAR3-201ENST00000260502 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
BCAR3-201ENST00000260502 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
BCAR3-201ENST00000260502 ARID3CA6NKF2 412 aa23.08■■□□□ 1.29
BCAR3-201ENST00000260502 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.28
BCAR3-201ENST00000260502 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
BCAR3-201ENST00000260502 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
BCAR3-201ENST00000260502 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
BCAR3-201ENST00000260502 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
BCAR3-201ENST00000260502 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
BCAR3-201ENST00000260502 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
BCAR3-201ENST00000260502 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
BCAR3-201ENST00000260502 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
BCAR3-201ENST00000260502 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
BCAR3-201ENST00000260502 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
BCAR3-201ENST00000260502 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
BCAR3-201ENST00000260502 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
BCAR3-201ENST00000260502 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
BCAR3-201ENST00000260502 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
BCAR3-201ENST00000260502 MYT1Q01538 1121 aa22.89■■□□□ 1.26
BCAR3-201ENST00000260502 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
BCAR3-201ENST00000260502 CASKIN1Q8WXD9 1431 aa22.84■■□□□ 1.25
BCAR3-201ENST00000260502 CHIC2Q9UKJ5 165 aa22.83■■□□□ 1.25
BCAR3-201ENST00000260502 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
BCAR3-201ENST00000260502 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
BCAR3-201ENST00000260502 FMN1Q68DA7 1419 aa22.81■■□□□ 1.24
BCAR3-201ENST00000260502 CUL7Q14999 1698 aa22.81■■□□□ 1.24
BCAR3-201ENST00000260502 FYCO1Q9BQS8 1478 aa22.8■■□□□ 1.24
BCAR3-201ENST00000260502 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
BCAR3-201ENST00000260502 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
BCAR3-201ENST00000260502 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
BCAR3-201ENST00000260502 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
BCAR3-201ENST00000260502 DDX10Q13206 875 aaKnown RBP22.74■■□□□ 1.23
BCAR3-201ENST00000260502 CFAP43Q8NDM7 1665 aa22.73■■□□□ 1.23
BCAR3-201ENST00000260502 KCNH8Q96L42 1107 aa22.73■■□□□ 1.23
BCAR3-201ENST00000260502 FBLN2P98095 1184 aa22.72■■□□□ 1.23
BCAR3-201ENST00000260502 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
BCAR3-201ENST00000260502 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
BCAR3-201ENST00000260502 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
BCAR3-201ENST00000260502 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
BCAR3-201ENST00000260502 PTPRKQ15262 1439 aa22.67■■□□□ 1.22
BCAR3-201ENST00000260502 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
BCAR3-201ENST00000260502 NCOA2Q15596 1464 aa22.64■■□□□ 1.22
BCAR3-201ENST00000260502 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
BCAR3-201ENST00000260502 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
BCAR3-201ENST00000260502 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
BCAR3-201ENST00000260502 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
BCAR3-201ENST00000260502 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
BCAR3-201ENST00000260502 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
BCAR3-201ENST00000260502 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
BCAR3-201ENST00000260502 LRRIQ1Q96JM4 1722 aa22.56■■□□□ 1.2
BCAR3-201ENST00000260502 SAMD9Q5K651 1589 aa22.56■■□□□ 1.2
BCAR3-201ENST00000260502 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
BCAR3-201ENST00000260502 FOXD1Q16676 465 aa22.54■■□□□ 1.2
BCAR3-201ENST00000260502 CDK13Q14004 1512 aaKnown RBP22.54■■□□□ 1.2
BCAR3-201ENST00000260502 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
BCAR3-201ENST00000260502 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
BCAR3-201ENST00000260502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
BCAR3-201ENST00000260502 ZNF644Q9H582 1327 aaPredicted RBP22.49■■□□□ 1.19
BCAR3-201ENST00000260502 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
BCAR3-201ENST00000260502 NAIPQ13075 1403 aa22.48■■□□□ 1.19
BCAR3-201ENST00000260502 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
BCAR3-201ENST00000260502 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
BCAR3-201ENST00000260502 ZNF777Q9ULD5 760 aaPredicted RBP22.47■■□□□ 1.19
BCAR3-201ENST00000260502 HFM1A2PYH4 1435 aa22.46■■□□□ 1.19
BCAR3-201ENST00000260502 SUPT6HQ7KZ85 1726 aaKnown RBP22.45■■□□□ 1.18
BCAR3-201ENST00000260502 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
BCAR3-201ENST00000260502 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
BCAR3-201ENST00000260502 UACAQ9BZF9 1416 aa22.42■■□□□ 1.18
BCAR3-201ENST00000260502 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
BCAR3-201ENST00000260502 PTPN23Q9H3S7 1636 aa22.41■■□□□ 1.18
BCAR3-201ENST00000260502 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
BCAR3-201ENST00000260502 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
BCAR3-201ENST00000260502 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
BCAR3-201ENST00000260502 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
BCAR3-201ENST00000260502 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
BCAR3-201ENST00000260502 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
BCAR3-201ENST00000260502 ANP32CO43423 234 aa22.34■■□□□ 1.17
BCAR3-201ENST00000260502 CDK11AQ9UQ88 783 aaPredicted RBP22.32■■□□□ 1.16
BCAR3-201ENST00000260502 BCANQ96GW7 911 aa22.31■■□□□ 1.16
BCAR3-201ENST00000260502 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
BCAR3-201ENST00000260502 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
BCAR3-201ENST00000260502 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
BCAR3-201ENST00000260502 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
BCAR3-201ENST00000260502 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
BCAR3-201ENST00000260502 WDR62O43379 1518 aa22.28■■□□□ 1.16
BCAR3-201ENST00000260502 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
BCAR3-201ENST00000260502 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.16
BCAR3-201ENST00000260502 DISP1Q96F81 1524 aa22.27■■□□□ 1.16
BCAR3-201ENST00000260502 KDM6BO15054 1643 aa22.27■■□□□ 1.16
BCAR3-201ENST00000260502 SLC4A1APQ9BWU0 796 aaKnown RBP22.27■■□□□ 1.16
BCAR3-201ENST00000260502 L3MBTL2Q969R5 705 aa22.27■■□□□ 1.16
BCAR3-201ENST00000260502 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
BCAR3-201ENST00000260502 HSPA5P11021 654 aaKnown RBP22.24■■□□□ 1.15
BCAR3-201ENST00000260502 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
BCAR3-201ENST00000260502 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
BCAR3-201ENST00000260502 NUP153P49790 1475 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms