RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
CAB39-201ENST00000258418 KIF21BO75037 1637 aa20.64■□□□□ 0.89
CAB39-201ENST00000258418 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
CAB39-201ENST00000258418 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
CAB39-201ENST00000258418 FOXD1Q16676 465 aa20.61■□□□□ 0.89
CAB39-201ENST00000258418 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
CAB39-201ENST00000258418 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
CAB39-201ENST00000258418 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
CAB39-201ENST00000258418 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
CAB39-201ENST00000258418 IGF1RP08069 1367 aa20.57■□□□□ 0.88
CAB39-201ENST00000258418 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
CAB39-201ENST00000258418 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
CAB39-201ENST00000258418 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
CAB39-201ENST00000258418 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
CAB39-201ENST00000258418 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
CAB39-201ENST00000258418 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
CAB39-201ENST00000258418 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
CAB39-201ENST00000258418 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
CAB39-201ENST00000258418 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
CAB39-201ENST00000258418 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
CAB39-201ENST00000258418 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
CAB39-201ENST00000258418 CUX1P39880 1505 aa20.45■□□□□ 0.86
CAB39-201ENST00000258418 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
CAB39-201ENST00000258418 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
CAB39-201ENST00000258418 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
CAB39-201ENST00000258418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
CAB39-201ENST00000258418 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
CAB39-201ENST00000258418 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
CAB39-201ENST00000258418 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
CAB39-201ENST00000258418 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
CAB39-201ENST00000258418 NESP48681 1621 aa20.4■□□□□ 0.86
CAB39-201ENST00000258418 MYT1Q01538 1121 aa20.4■□□□□ 0.86
CAB39-201ENST00000258418 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
CAB39-201ENST00000258418 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
CAB39-201ENST00000258418 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
CAB39-201ENST00000258418 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
CAB39-201ENST00000258418 CFTRP13569 1480 aa20.34■□□□□ 0.85
CAB39-201ENST00000258418 CFDP1Q9UEE9 299 aaPredicted RBP20.31■□□□□ 0.84
CAB39-201ENST00000258418 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
CAB39-201ENST00000258418 HSPA5P11021 654 aaKnown RBP20.27■□□□□ 0.84
CAB39-201ENST00000258418 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
CAB39-201ENST00000258418 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
CAB39-201ENST00000258418 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
CAB39-201ENST00000258418 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
CAB39-201ENST00000258418 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
CAB39-201ENST00000258418 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
CAB39-201ENST00000258418 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
CAB39-201ENST00000258418 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
CAB39-201ENST00000258418 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
CAB39-201ENST00000258418 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
CAB39-201ENST00000258418 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
CAB39-201ENST00000258418 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
CAB39-201ENST00000258418 TMC1Q8TDI8 760 aa20.14■□□□□ 0.81
CAB39-201ENST00000258418 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
CAB39-201ENST00000258418 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.813e-6■■■□□ 19
CAB39-201ENST00000258418 TSHZ2Q9NRE2 1034 aa20.12■□□□□ 0.81
CAB39-201ENST00000258418 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.81
CAB39-201ENST00000258418 HMGXB3Q12766 1538 aa20.08■□□□□ 0.8
CAB39-201ENST00000258418 PKD2Q13563 968 aa20.08■□□□□ 0.8
CAB39-201ENST00000258418 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
CAB39-201ENST00000258418 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
CAB39-201ENST00000258418 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
CAB39-201ENST00000258418 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
CAB39-201ENST00000258418 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
CAB39-201ENST00000258418 CCDC18Q5T9S5 1454 aa20.05■□□□□ 0.8
CAB39-201ENST00000258418 FGD6Q6ZV73 1430 aa20.05■□□□□ 0.8
CAB39-201ENST00000258418 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
CAB39-201ENST00000258418 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
CAB39-201ENST00000258418 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
CAB39-201ENST00000258418 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
CAB39-201ENST00000258418 TOPBP1Q92547 1522 aa20.01■□□□□ 0.79
CAB39-201ENST00000258418 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.799e-7■■■■□ 26.6
CAB39-201ENST00000258418 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
CAB39-201ENST00000258418 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
CAB39-201ENST00000258418 CCER2I3L3R5 266 aa19.98■□□□□ 0.79
CAB39-201ENST00000258418 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
CAB39-201ENST00000258418 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
CAB39-201ENST00000258418 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
CAB39-201ENST00000258418 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
CAB39-201ENST00000258418 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
CAB39-201ENST00000258418 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
CAB39-201ENST00000258418 CC2D1BQ5T0F9 858 aaKnown RBP19.91■□□□□ 0.78
CAB39-201ENST00000258418 ANP32EQ9BTT0 268 aa19.91■□□□□ 0.78
CAB39-201ENST00000258418 PCF11O94913 1555 aaKnown RBP19.9■□□□□ 0.78
CAB39-201ENST00000258418 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
CAB39-201ENST00000258418 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
CAB39-201ENST00000258418 NUP155O75694 1391 aa19.89■□□□□ 0.77
CAB39-201ENST00000258418 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
CAB39-201ENST00000258418 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
CAB39-201ENST00000258418 NBR1Q14596 966 aa19.87■□□□□ 0.77
CAB39-201ENST00000258418 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
CAB39-201ENST00000258418 UACAQ9BZF9 1416 aa19.83■□□□□ 0.77
CAB39-201ENST00000258418 FYCO1Q9BQS8 1478 aa19.82■□□□□ 0.76
CAB39-201ENST00000258418 PRKRIP1Q9H875 184 aaPredicted RBP19.81■□□□□ 0.76
CAB39-201ENST00000258418 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
CAB39-201ENST00000258418 C11orf95C9JLR9 678 aaPredicted RBP19.8■□□□□ 0.76
CAB39-201ENST00000258418 ST20-MTHFSA0A0A6YYL1 179 aa19.79■□□□□ 0.76
CAB39-201ENST00000258418 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
CAB39-201ENST00000258418 CDK13Q14004 1512 aaKnown RBP19.79■□□□□ 0.76
CAB39-201ENST00000258418 MAPKBP1O60336 1514 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms