RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
SLC27A1-201ENST00000252595 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
SLC27A1-201ENST00000252595 CFTRP13569 1480 aa23.77■■□□□ 1.4
SLC27A1-201ENST00000252595 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
SLC27A1-201ENST00000252595 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
SLC27A1-201ENST00000252595 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
SLC27A1-201ENST00000252595 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
SLC27A1-201ENST00000252595 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
SLC27A1-201ENST00000252595 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
SLC27A1-201ENST00000252595 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
SLC27A1-201ENST00000252595 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
SLC27A1-201ENST00000252595 FOXD1Q16676 465 aa23.62■■□□□ 1.37
SLC27A1-201ENST00000252595 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
SLC27A1-201ENST00000252595 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
SLC27A1-201ENST00000252595 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
SLC27A1-201ENST00000252595 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
SLC27A1-201ENST00000252595 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
SLC27A1-201ENST00000252595 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
SLC27A1-201ENST00000252595 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
SLC27A1-201ENST00000252595 ANP32CO43423 234 aa23.48■■□□□ 1.35
SLC27A1-201ENST00000252595 FHAD1B1AJZ9 1412 aa23.46■■□□□ 1.35
SLC27A1-201ENST00000252595 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
SLC27A1-201ENST00000252595 PELP1Q8IZL8 1130 aaKnown RBP23.43■■□□□ 1.34
SLC27A1-201ENST00000252595 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
SLC27A1-201ENST00000252595 NEFLP07196 543 aa23.41■■□□□ 1.34
SLC27A1-201ENST00000252595 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.34
SLC27A1-201ENST00000252595 CLSPNQ9HAW4 1339 aa23.36■■□□□ 1.33
SLC27A1-201ENST00000252595 IRX6P78412 446 aaPredicted RBP23.35■■□□□ 1.33
SLC27A1-201ENST00000252595 FKBP8Q14318 412 aa23.35■■□□□ 1.33
SLC27A1-201ENST00000252595 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
SLC27A1-201ENST00000252595 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
SLC27A1-201ENST00000252595 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
SLC27A1-201ENST00000252595 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
SLC27A1-201ENST00000252595 LRRC9Q6ZRR7 1453 aa23.33■■□□□ 1.33
SLC27A1-201ENST00000252595 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
SLC27A1-201ENST00000252595 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
SLC27A1-201ENST00000252595 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
SLC27A1-201ENST00000252595 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
SLC27A1-201ENST00000252595 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
SLC27A1-201ENST00000252595 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
SLC27A1-201ENST00000252595 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
SLC27A1-201ENST00000252595 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
SLC27A1-201ENST00000252595 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
SLC27A1-201ENST00000252595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.31
SLC27A1-201ENST00000252595 CFDP1Q9UEE9 299 aaPredicted RBP23.22■■□□□ 1.31
SLC27A1-201ENST00000252595 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
SLC27A1-201ENST00000252595 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
SLC27A1-201ENST00000252595 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
SLC27A1-201ENST00000252595 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
SLC27A1-201ENST00000252595 TIAM1Q13009 1591 aa23.15■■□□□ 1.3
SLC27A1-201ENST00000252595 PCF11O94913 1555 aaKnown RBP23.12■■□□□ 1.29
SLC27A1-201ENST00000252595 MPHOSPH9Q99550 1183 aa23.12■■□□□ 1.29
SLC27A1-201ENST00000252595 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
SLC27A1-201ENST00000252595 FGD6Q6ZV73 1430 aa23.12■■□□□ 1.29
SLC27A1-201ENST00000252595 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
SLC27A1-201ENST00000252595 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
SLC27A1-201ENST00000252595 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
SLC27A1-201ENST00000252595 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.298e-7■■■■■ 28.7
SLC27A1-201ENST00000252595 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
SLC27A1-201ENST00000252595 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
SLC27A1-201ENST00000252595 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
SLC27A1-201ENST00000252595 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
SLC27A1-201ENST00000252595 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
SLC27A1-201ENST00000252595 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
SLC27A1-201ENST00000252595 WDR97A6NE52 1622 aa23.03■■□□□ 1.28
SLC27A1-201ENST00000252595 NCOA2Q15596 1464 aa23.03■■□□□ 1.28
SLC27A1-201ENST00000252595 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
SLC27A1-201ENST00000252595 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
SLC27A1-201ENST00000252595 TSPY4P0CV99 314 aa23■■□□□ 1.27
SLC27A1-201ENST00000252595 TSPY10P0CW01 314 aa23■■□□□ 1.27
SLC27A1-201ENST00000252595 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
SLC27A1-201ENST00000252595 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
SLC27A1-201ENST00000252595 PKD2Q13563 968 aa22.96■■□□□ 1.27
SLC27A1-201ENST00000252595 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
SLC27A1-201ENST00000252595 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
SLC27A1-201ENST00000252595 MYOM3Q5VTT5 1437 aa22.94■■□□□ 1.26
SLC27A1-201ENST00000252595 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
SLC27A1-201ENST00000252595 MAPKBP1O60336 1514 aa22.9■■□□□ 1.26
SLC27A1-201ENST00000252595 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
SLC27A1-201ENST00000252595 DCAF11Q8TEB1 546 aa22.84■■□□□ 1.25
SLC27A1-201ENST00000252595 TIMELESSQ9UNS1 1208 aa22.84■■□□□ 1.25
SLC27A1-201ENST00000252595 NAIPQ13075 1403 aa22.83■■□□□ 1.24
SLC27A1-201ENST00000252595 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
SLC27A1-201ENST00000252595 NBPF8Q3BBV2 869 aa22.81■■□□□ 1.24
SLC27A1-201ENST00000252595 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
SLC27A1-201ENST00000252595 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
SLC27A1-201ENST00000252595 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
SLC27A1-201ENST00000252595 WASHC2AQ641Q2 1341 aa22.79■■□□□ 1.24
SLC27A1-201ENST00000252595 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
SLC27A1-201ENST00000252595 NUP155O75694 1391 aa22.77■■□□□ 1.23
SLC27A1-201ENST00000252595 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
SLC27A1-201ENST00000252595 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
SLC27A1-201ENST00000252595 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
SLC27A1-201ENST00000252595 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
SLC27A1-201ENST00000252595 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
SLC27A1-201ENST00000252595 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
SLC27A1-201ENST00000252595 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
SLC27A1-201ENST00000252595 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
SLC27A1-201ENST00000252595 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
SLC27A1-201ENST00000252595 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms