RNA–Protein interactions for RNA: ENST00000250241.12

ILF3-201, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-201ENST00000250241 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
ILF3-201ENST00000250241 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
ILF3-201ENST00000250241 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
ILF3-201ENST00000250241 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
ILF3-201ENST00000250241 KANK4Q5T7N3 995 aaPredicted RBP19.22■□□□□ 0.67
ILF3-201ENST00000250241 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
ILF3-201ENST00000250241 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
ILF3-201ENST00000250241 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
ILF3-201ENST00000250241 ITGAEP38570 1179 aa19.14■□□□□ 0.65
ILF3-201ENST00000250241 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
ILF3-201ENST00000250241 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
ILF3-201ENST00000250241 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
ILF3-201ENST00000250241 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.634e-9■■■■□ 23.4
ILF3-201ENST00000250241 ERCC6Q03468 1493 aa18.98■□□□□ 0.63
ILF3-201ENST00000250241 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
ILF3-201ENST00000250241 BCANQ96GW7 911 aa18.96■□□□□ 0.63
ILF3-201ENST00000250241 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
ILF3-201ENST00000250241 ARID3CA6NKF2 412 aa18.94■□□□□ 0.62
ILF3-201ENST00000250241 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
ILF3-201ENST00000250241 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
ILF3-201ENST00000250241 FBLN2P98095 1184 aa18.91■□□□□ 0.62
ILF3-201ENST00000250241 CUL7Q14999 1698 aa18.91■□□□□ 0.62
ILF3-201ENST00000250241 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
ILF3-201ENST00000250241 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
ILF3-201ENST00000250241 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
ILF3-201ENST00000250241 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
ILF3-201ENST00000250241 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
ILF3-201ENST00000250241 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
ILF3-201ENST00000250241 CCNB3Q8WWL7 1395 aa18.84■□□□□ 0.61
ILF3-201ENST00000250241 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
ILF3-201ENST00000250241 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
ILF3-201ENST00000250241 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
ILF3-201ENST00000250241 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
ILF3-201ENST00000250241 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
ILF3-201ENST00000250241 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
ILF3-201ENST00000250241 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
ILF3-201ENST00000250241 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
ILF3-201ENST00000250241 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
ILF3-201ENST00000250241 RRBP1Q9P2E9 1410 aaKnown RBP18.75■□□□□ 0.59
ILF3-201ENST00000250241 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
ILF3-201ENST00000250241 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
ILF3-201ENST00000250241 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
ILF3-201ENST00000250241 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
ILF3-201ENST00000250241 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
ILF3-201ENST00000250241 WDR62O43379 1518 aa18.71■□□□□ 0.59
ILF3-201ENST00000250241 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.58
ILF3-201ENST00000250241 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
ILF3-201ENST00000250241 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
ILF3-201ENST00000250241 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
ILF3-201ENST00000250241 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
ILF3-201ENST00000250241 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
ILF3-201ENST00000250241 IQGAP2Q13576 1575 aa18.63■□□□□ 0.57
ILF3-201ENST00000250241 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
ILF3-201ENST00000250241 CFAP43Q8NDM7 1665 aa18.61■□□□□ 0.57
ILF3-201ENST00000250241 FKBP8Q14318 412 aa18.61■□□□□ 0.57
ILF3-201ENST00000250241 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
ILF3-201ENST00000250241 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
ILF3-201ENST00000250241 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
ILF3-201ENST00000250241 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
ILF3-201ENST00000250241 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
ILF3-201ENST00000250241 CDK13Q14004 1512 aaKnown RBP18.53■□□□□ 0.56
ILF3-201ENST00000250241 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.56
ILF3-201ENST00000250241 NCOA2Q15596 1464 aa18.52■□□□□ 0.56
ILF3-201ENST00000250241 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.55
ILF3-201ENST00000250241 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
ILF3-201ENST00000250241 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
ILF3-201ENST00000250241 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
ILF3-201ENST00000250241 JPH4Q96JJ6 628 aa18.5■□□□□ 0.55
ILF3-201ENST00000250241 RRP7BPQ9NSQ0 103 aa18.49■□□□□ 0.55
ILF3-201ENST00000250241 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
ILF3-201ENST00000250241 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
ILF3-201ENST00000250241 SYNJ2O15056 1496 aa18.46■□□□□ 0.55
ILF3-201ENST00000250241 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
ILF3-201ENST00000250241 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
ILF3-201ENST00000250241 TRIM52Q96A61 297 aa18.45■□□□□ 0.54
ILF3-201ENST00000250241 DISP1Q96F81 1524 aa18.44■□□□□ 0.54
ILF3-201ENST00000250241 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
ILF3-201ENST00000250241 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
ILF3-201ENST00000250241 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
ILF3-201ENST00000250241 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
ILF3-201ENST00000250241 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
ILF3-201ENST00000250241 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
ILF3-201ENST00000250241 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
ILF3-201ENST00000250241 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
ILF3-201ENST00000250241 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
ILF3-201ENST00000250241 CCDC18Q5T9S5 1454 aa18.41■□□□□ 0.54
ILF3-201ENST00000250241 SUPT6HQ7KZ85 1726 aaKnown RBP18.41■□□□□ 0.54
ILF3-201ENST00000250241 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
ILF3-201ENST00000250241 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
ILF3-201ENST00000250241 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
ILF3-201ENST00000250241 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
ILF3-201ENST00000250241 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
ILF3-201ENST00000250241 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
ILF3-201ENST00000250241 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
ILF3-201ENST00000250241 NEFLP07196 543 aa18.35■□□□□ 0.53
ILF3-201ENST00000250241 NUP153P49790 1475 aaKnown RBP18.34■□□□□ 0.53
ILF3-201ENST00000250241 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
ILF3-201ENST00000250241 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
ILF3-201ENST00000250241 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
ILF3-201ENST00000250241 UBE2Q2Q8WVN8 375 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms