RNA–Protein interactions for RNA: ENST00000248929.13

SGSM3-201, Transcript of small G protein signaling modulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGSM3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-201ENST00000248929 POLA1P09884 1462 aaPredicted RBP19.8■□□□□ 0.76
SGSM3-201ENST00000248929 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
SGSM3-201ENST00000248929 FAM50AQ14320 339 aaKnown RBP19.77■□□□□ 0.76
SGSM3-201ENST00000248929 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.75
SGSM3-201ENST00000248929 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
SGSM3-201ENST00000248929 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
SGSM3-201ENST00000248929 TIAM1Q13009 1591 aa19.73■□□□□ 0.75
SGSM3-201ENST00000248929 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
SGSM3-201ENST00000248929 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
SGSM3-201ENST00000248929 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
SGSM3-201ENST00000248929 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
SGSM3-201ENST00000248929 CLSPNQ9HAW4 1339 aa19.69■□□□□ 0.74
SGSM3-201ENST00000248929 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
SGSM3-201ENST00000248929 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
SGSM3-201ENST00000248929 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
SGSM3-201ENST00000248929 PCF11O94913 1555 aaKnown RBP19.66■□□□□ 0.74
SGSM3-201ENST00000248929 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
SGSM3-201ENST00000248929 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
SGSM3-201ENST00000248929 SETD5Q9C0A6 1442 aa19.56■□□□□ 0.72
SGSM3-201ENST00000248929 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
SGSM3-201ENST00000248929 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
SGSM3-201ENST00000248929 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
SGSM3-201ENST00000248929 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
SGSM3-201ENST00000248929 CUL7Q14999 1698 aa19.52■□□□□ 0.72
SGSM3-201ENST00000248929 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
SGSM3-201ENST00000248929 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
SGSM3-201ENST00000248929 MAPKBP1O60336 1514 aa19.5■□□□□ 0.71
SGSM3-201ENST00000248929 CFAP43Q8NDM7 1665 aa19.5■□□□□ 0.71
SGSM3-201ENST00000248929 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
SGSM3-201ENST00000248929 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
SGSM3-201ENST00000248929 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
SGSM3-201ENST00000248929 CTTNBP2Q8WZ74 1663 aa19.47■□□□□ 0.71
SGSM3-201ENST00000248929 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
SGSM3-201ENST00000248929 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
SGSM3-201ENST00000248929 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
SGSM3-201ENST00000248929 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
SGSM3-201ENST00000248929 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
SGSM3-201ENST00000248929 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.76e-7■■■■□ 20.4
SGSM3-201ENST00000248929 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
SGSM3-201ENST00000248929 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
SGSM3-201ENST00000248929 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.7
SGSM3-201ENST00000248929 PTPRKQ15262 1439 aa19.34■□□□□ 0.69
SGSM3-201ENST00000248929 ERCC6Q03468 1493 aa19.33■□□□□ 0.69
SGSM3-201ENST00000248929 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.68
SGSM3-201ENST00000248929 SAMD9Q5K651 1589 aa19.33■□□□□ 0.68
SGSM3-201ENST00000248929 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
SGSM3-201ENST00000248929 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
SGSM3-201ENST00000248929 NCOA2Q15596 1464 aa19.32■□□□□ 0.68
SGSM3-201ENST00000248929 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
SGSM3-201ENST00000248929 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
SGSM3-201ENST00000248929 LRRIQ1Q96JM4 1722 aa19.3■□□□□ 0.68
SGSM3-201ENST00000248929 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
SGSM3-201ENST00000248929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.27■□□□□ 0.68
SGSM3-201ENST00000248929 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
SGSM3-201ENST00000248929 CCDC18Q5T9S5 1454 aa19.27■□□□□ 0.67
SGSM3-201ENST00000248929 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
SGSM3-201ENST00000248929 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
SGSM3-201ENST00000248929 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
SGSM3-201ENST00000248929 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
SGSM3-201ENST00000248929 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
SGSM3-201ENST00000248929 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
SGSM3-201ENST00000248929 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
SGSM3-201ENST00000248929 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
SGSM3-201ENST00000248929 NAIPQ13075 1403 aa19.2■□□□□ 0.66
SGSM3-201ENST00000248929 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
SGSM3-201ENST00000248929 FBLN2P98095 1184 aa19.19■□□□□ 0.66
SGSM3-201ENST00000248929 EHBP1L1Q8N3D4 1523 aa19.19■□□□□ 0.66
SGSM3-201ENST00000248929 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
SGSM3-201ENST00000248929 SUPT6HQ7KZ85 1726 aaKnown RBP19.19■□□□□ 0.66
SGSM3-201ENST00000248929 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
SGSM3-201ENST00000248929 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
SGSM3-201ENST00000248929 UACAQ9BZF9 1416 aa19.16■□□□□ 0.66
SGSM3-201ENST00000248929 EPRSP07814 1512 aaKnown RBP19.16■□□□□ 0.66
SGSM3-201ENST00000248929 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
SGSM3-201ENST00000248929 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
SGSM3-201ENST00000248929 THOC2Q8NI27 1593 aaKnown RBP19.14■□□□□ 0.65
SGSM3-201ENST00000248929 FOXD1Q16676 465 aa19.11■□□□□ 0.65
SGSM3-201ENST00000248929 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
SGSM3-201ENST00000248929 ZNF644Q9H582 1327 aaPredicted RBP19.09■□□□□ 0.65
SGSM3-201ENST00000248929 IFT140Q96RY7 1462 aa19.08■□□□□ 0.65
SGSM3-201ENST00000248929 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
SGSM3-201ENST00000248929 WDR62O43379 1518 aa19.06■□□□□ 0.64
SGSM3-201ENST00000248929 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
SGSM3-201ENST00000248929 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
SGSM3-201ENST00000248929 KDM6BO15054 1643 aa19.03■□□□□ 0.64
SGSM3-201ENST00000248929 DISP1Q96F81 1524 aa19.02■□□□□ 0.64
SGSM3-201ENST00000248929 KIAA0586Q9BVV6 1533 aa19.01■□□□□ 0.63
SGSM3-201ENST00000248929 ANP32CO43423 234 aa19.01■□□□□ 0.63
SGSM3-201ENST00000248929 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
SGSM3-201ENST00000248929 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
SGSM3-201ENST00000248929 MPHOSPH9Q99550 1183 aa19.01■□□□□ 0.63
SGSM3-201ENST00000248929 GRIN2AQ12879 1464 aa19■□□□□ 0.63
SGSM3-201ENST00000248929 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
SGSM3-201ENST00000248929 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
SGSM3-201ENST00000248929 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
SGSM3-201ENST00000248929 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
SGSM3-201ENST00000248929 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
SGSM3-201ENST00000248929 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
SGSM3-201ENST00000248929 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
SGSM3-201ENST00000248929 CDK11AQ9UQ88 783 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms