RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
PEX1-201ENST00000248633 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
PEX1-201ENST00000248633 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
PEX1-201ENST00000248633 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
PEX1-201ENST00000248633 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
PEX1-201ENST00000248633 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
PEX1-201ENST00000248633 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
PEX1-201ENST00000248633 ANP32CO43423 234 aa18.79■□□□□ 0.6
PEX1-201ENST00000248633 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
PEX1-201ENST00000248633 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
PEX1-201ENST00000248633 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.6
PEX1-201ENST00000248633 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
PEX1-201ENST00000248633 KIF21BO75037 1637 aa18.76■□□□□ 0.59
PEX1-201ENST00000248633 GAPVD1Q14C86 1478 aa18.75■□□□□ 0.59
PEX1-201ENST00000248633 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
PEX1-201ENST00000248633 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
PEX1-201ENST00000248633 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
PEX1-201ENST00000248633 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
PEX1-201ENST00000248633 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
PEX1-201ENST00000248633 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
PEX1-201ENST00000248633 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
PEX1-201ENST00000248633 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
PEX1-201ENST00000248633 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
PEX1-201ENST00000248633 MRC2Q9UBG0 1479 aa18.68■□□□□ 0.58
PEX1-201ENST00000248633 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
PEX1-201ENST00000248633 FHOD3Q2V2M9 1422 aa18.67■□□□□ 0.58
PEX1-201ENST00000248633 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
PEX1-201ENST00000248633 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
PEX1-201ENST00000248633 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
PEX1-201ENST00000248633 HNRNPUQ00839 825 aaKnown RBP eCLIP18.6■□□□□ 0.57
PEX1-201ENST00000248633 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
PEX1-201ENST00000248633 CHIC2Q9UKJ5 165 aa18.59■□□□□ 0.57
PEX1-201ENST00000248633 FMN1Q68DA7 1419 aa18.58■□□□□ 0.56
PEX1-201ENST00000248633 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
PEX1-201ENST00000248633 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
PEX1-201ENST00000248633 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
PEX1-201ENST00000248633 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
PEX1-201ENST00000248633 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
PEX1-201ENST00000248633 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
PEX1-201ENST00000248633 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
PEX1-201ENST00000248633 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
PEX1-201ENST00000248633 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
PEX1-201ENST00000248633 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
PEX1-201ENST00000248633 JPH4Q96JJ6 628 aa18.48■□□□□ 0.55
PEX1-201ENST00000248633 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
PEX1-201ENST00000248633 NBR1Q14596 966 aa18.46■□□□□ 0.55
PEX1-201ENST00000248633 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
PEX1-201ENST00000248633 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
PEX1-201ENST00000248633 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
PEX1-201ENST00000248633 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
PEX1-201ENST00000248633 SENP3-EIF4A1A0A087X0R7 540 aa18.44■□□□□ 0.54
PEX1-201ENST00000248633 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
PEX1-201ENST00000248633 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
PEX1-201ENST00000248633 CFDP1Q9UEE9 299 aaPredicted RBP18.4■□□□□ 0.54
PEX1-201ENST00000248633 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
PEX1-201ENST00000248633 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
PEX1-201ENST00000248633 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
PEX1-201ENST00000248633 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
PEX1-201ENST00000248633 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
PEX1-201ENST00000248633 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
PEX1-201ENST00000248633 DAXXQ9UER7 740 aaPredicted RBP18.35■□□□□ 0.53
PEX1-201ENST00000248633 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
PEX1-201ENST00000248633 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
PEX1-201ENST00000248633 CUL7Q14999 1698 aa18.34■□□□□ 0.53
PEX1-201ENST00000248633 CASKIN1Q8WXD9 1431 aa18.29■□□□□ 0.52
PEX1-201ENST00000248633 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
PEX1-201ENST00000248633 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
PEX1-201ENST00000248633 ANP32AP39687 249 aaKnown RBP18.26■□□□□ 0.51
PEX1-201ENST00000248633 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
PEX1-201ENST00000248633 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
PEX1-201ENST00000248633 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
PEX1-201ENST00000248633 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
PEX1-201ENST00000248633 FYCO1Q9BQS8 1478 aa18.23■□□□□ 0.51
PEX1-201ENST00000248633 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
PEX1-201ENST00000248633 PTPRGP23470 1445 aa18.22■□□□□ 0.51
PEX1-201ENST00000248633 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
PEX1-201ENST00000248633 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
PEX1-201ENST00000248633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
PEX1-201ENST00000248633 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
PEX1-201ENST00000248633 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
PEX1-201ENST00000248633 B4GALNT3Q6L9W6 998 aa18.19■□□□□ 0.5
PEX1-201ENST00000248633 IQGAP2Q13576 1575 aa18.18■□□□□ 0.5
PEX1-201ENST00000248633 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
PEX1-201ENST00000248633 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
PEX1-201ENST00000248633 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
PEX1-201ENST00000248633 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
PEX1-201ENST00000248633 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
PEX1-201ENST00000248633 WDR62O43379 1518 aa18.14■□□□□ 0.49
PEX1-201ENST00000248633 PCF11O94913 1555 aaKnown RBP18.14■□□□□ 0.49
PEX1-201ENST00000248633 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
PEX1-201ENST00000248633 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
PEX1-201ENST00000248633 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
PEX1-201ENST00000248633 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
PEX1-201ENST00000248633 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
PEX1-201ENST00000248633 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
PEX1-201ENST00000248633 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
PEX1-201ENST00000248633 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
PEX1-201ENST00000248633 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
PEX1-201ENST00000248633 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
PEX1-201ENST00000248633 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms