RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 SOGA1O94964 1423 aa14.87□□□□□ -0.03
EXOSC9-201ENST00000243498 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
EXOSC9-201ENST00000243498 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
EXOSC9-201ENST00000243498 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
EXOSC9-201ENST00000243498 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
EXOSC9-201ENST00000243498 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
EXOSC9-201ENST00000243498 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
EXOSC9-201ENST00000243498 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
EXOSC9-201ENST00000243498 CUX2O14529 1486 aa14.8□□□□□ -0.04
EXOSC9-201ENST00000243498 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
EXOSC9-201ENST00000243498 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
EXOSC9-201ENST00000243498 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
EXOSC9-201ENST00000243498 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
EXOSC9-201ENST00000243498 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
EXOSC9-201ENST00000243498 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
EXOSC9-201ENST00000243498 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
EXOSC9-201ENST00000243498 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
EXOSC9-201ENST00000243498 KIF21BO75037 1637 aa14.7□□□□□ -0.06
EXOSC9-201ENST00000243498 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
EXOSC9-201ENST00000243498 TDRD9Q8NDG6 1382 aaKnown RBP14.68□□□□□ -0.06
EXOSC9-201ENST00000243498 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
EXOSC9-201ENST00000243498 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
EXOSC9-201ENST00000243498 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
EXOSC9-201ENST00000243498 IGF1RP08069 1367 aa14.67□□□□□ -0.06
EXOSC9-201ENST00000243498 CUL7Q14999 1698 aa14.66□□□□□ -0.06
EXOSC9-201ENST00000243498 POTEHQ6S545 545 aa14.64□□□□□ -0.07
EXOSC9-201ENST00000243498 PRXQ9BXM0 1461 aa14.64□□□□□ -0.07
EXOSC9-201ENST00000243498 CARMIL1Q5VZK9 1371 aa14.64□□□□□ -0.07
EXOSC9-201ENST00000243498 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
EXOSC9-201ENST00000243498 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
EXOSC9-201ENST00000243498 UBTFP17480 764 aaKnown RBP14.63□□□□□ -0.07
EXOSC9-201ENST00000243498 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■□□ 17.8
EXOSC9-201ENST00000243498 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
EXOSC9-201ENST00000243498 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
EXOSC9-201ENST00000243498 ZNF608Q9ULD9 1512 aaPredicted RBP14.59□□□□□ -0.07
EXOSC9-201ENST00000243498 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
EXOSC9-201ENST00000243498 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
EXOSC9-201ENST00000243498 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
EXOSC9-201ENST00000243498 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
EXOSC9-201ENST00000243498 ADAMTS12P58397 1594 aa14.51□□□□□ -0.09
EXOSC9-201ENST00000243498 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
EXOSC9-201ENST00000243498 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
EXOSC9-201ENST00000243498 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
EXOSC9-201ENST00000243498 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
EXOSC9-201ENST00000243498 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
EXOSC9-201ENST00000243498 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
EXOSC9-201ENST00000243498 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
EXOSC9-201ENST00000243498 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
EXOSC9-201ENST00000243498 CLIP1P30622 1438 aa14.4□□□□□ -0.1
EXOSC9-201ENST00000243498 FBLN2P98095 1184 aa14.4□□□□□ -0.1
EXOSC9-201ENST00000243498 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
EXOSC9-201ENST00000243498 KIAA0586Q9BVV6 1533 aa14.35□□□□□ -0.11
EXOSC9-201ENST00000243498 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
EXOSC9-201ENST00000243498 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
EXOSC9-201ENST00000243498 CHD1O14646 1710 aa14.34□□□□□ -0.11
EXOSC9-201ENST00000243498 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
EXOSC9-201ENST00000243498 NUP160Q12769 1436 aa14.32□□□□□ -0.12
EXOSC9-201ENST00000243498 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
EXOSC9-201ENST00000243498 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
EXOSC9-201ENST00000243498 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
EXOSC9-201ENST00000243498 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
EXOSC9-201ENST00000243498 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
EXOSC9-201ENST00000243498 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
EXOSC9-201ENST00000243498 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
EXOSC9-201ENST00000243498 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
EXOSC9-201ENST00000243498 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
EXOSC9-201ENST00000243498 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
EXOSC9-201ENST00000243498 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
EXOSC9-201ENST00000243498 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
EXOSC9-201ENST00000243498 FMN1Q68DA7 1419 aa14.22□□□□□ -0.13
EXOSC9-201ENST00000243498 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
EXOSC9-201ENST00000243498 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
EXOSC9-201ENST00000243498 KIAA0556O60303 1618 aa14.17□□□□□ -0.14
EXOSC9-201ENST00000243498 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
EXOSC9-201ENST00000243498 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
EXOSC9-201ENST00000243498 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
EXOSC9-201ENST00000243498 DISP1Q96F81 1524 aa14.14□□□□□ -0.15
EXOSC9-201ENST00000243498 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
EXOSC9-201ENST00000243498 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
EXOSC9-201ENST00000243498 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
EXOSC9-201ENST00000243498 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
EXOSC9-201ENST00000243498 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
EXOSC9-201ENST00000243498 MAP3K1Q13233 1512 aa14.09□□□□□ -0.15
EXOSC9-201ENST00000243498 PCF11O94913 1555 aaKnown RBP14.07□□□□□ -0.16
EXOSC9-201ENST00000243498 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
EXOSC9-201ENST00000243498 PTPRGP23470 1445 aa14.05□□□□□ -0.16
EXOSC9-201ENST00000243498 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
EXOSC9-201ENST00000243498 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
EXOSC9-201ENST00000243498 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
EXOSC9-201ENST00000243498 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
EXOSC9-201ENST00000243498 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
EXOSC9-201ENST00000243498 TIAM1Q13009 1591 aa14.02□□□□□ -0.16
EXOSC9-201ENST00000243498 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.16
EXOSC9-201ENST00000243498 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.17
EXOSC9-201ENST00000243498 CDK11AQ9UQ88 783 aaPredicted RBP14□□□□□ -0.17
EXOSC9-201ENST00000243498 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
EXOSC9-201ENST00000243498 ABCA8O94911 1581 aa13.98□□□□□ -0.17
EXOSC9-201ENST00000243498 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
EXOSC9-201ENST00000243498 EPRSP07814 1512 aaKnown RBP13.97□□□□□ -0.17
EXOSC9-201ENST00000243498 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms