RNA–Protein interactions for RNA: ENST00000238855.11

AFTPH-201, Transcript of aftiphilin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AFTPH, Length 4,113 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-201ENST00000238855 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
AFTPH-201ENST00000238855 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
AFTPH-201ENST00000238855 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
AFTPH-201ENST00000238855 CFTRP13569 1480 aa22.38■■□□□ 1.17
AFTPH-201ENST00000238855 CUX1P39880 1505 aa22.35■■□□□ 1.17
AFTPH-201ENST00000238855 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
AFTPH-201ENST00000238855 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
AFTPH-201ENST00000238855 IGF1RP08069 1367 aa22.34■■□□□ 1.17
AFTPH-201ENST00000238855 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
AFTPH-201ENST00000238855 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.17
AFTPH-201ENST00000238855 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
AFTPH-201ENST00000238855 NESP48681 1621 aa22.31■■□□□ 1.16
AFTPH-201ENST00000238855 RTN4Q9NQC3 1192 aaKnown RBP22.3■■□□□ 1.16
AFTPH-201ENST00000238855 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
AFTPH-201ENST00000238855 CHIC2Q9UKJ5 165 aa22.3■■□□□ 1.16
AFTPH-201ENST00000238855 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
AFTPH-201ENST00000238855 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
AFTPH-201ENST00000238855 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
AFTPH-201ENST00000238855 KIF21BO75037 1637 aa22.27■■□□□ 1.16
AFTPH-201ENST00000238855 MTUS2Q5JR59 1369 aa22.26■■□□□ 1.15
AFTPH-201ENST00000238855 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
AFTPH-201ENST00000238855 CCNB3Q8WWL7 1395 aa22.24■■□□□ 1.15
AFTPH-201ENST00000238855 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
AFTPH-201ENST00000238855 DEKP35659 375 aaKnown RBP22.22■■□□□ 1.15
AFTPH-201ENST00000238855 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
AFTPH-201ENST00000238855 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
AFTPH-201ENST00000238855 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
AFTPH-201ENST00000238855 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
AFTPH-201ENST00000238855 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
AFTPH-201ENST00000238855 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
AFTPH-201ENST00000238855 RRP7BPQ9NSQ0 103 aa22.13■■□□□ 1.13
AFTPH-201ENST00000238855 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
AFTPH-201ENST00000238855 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
AFTPH-201ENST00000238855 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
AFTPH-201ENST00000238855 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
AFTPH-201ENST00000238855 PRKCSHP14314 528 aaPredicted RBP22.07■■□□□ 1.12
AFTPH-201ENST00000238855 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
AFTPH-201ENST00000238855 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
AFTPH-201ENST00000238855 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
AFTPH-201ENST00000238855 SENP3-EIF4A1A0A087X0R7 540 aa22.04■■□□□ 1.12
AFTPH-201ENST00000238855 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
AFTPH-201ENST00000238855 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
AFTPH-201ENST00000238855 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
AFTPH-201ENST00000238855 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
AFTPH-201ENST00000238855 ZBTB4Q9P1Z0 1013 aaPredicted RBP22■■□□□ 1.11
AFTPH-201ENST00000238855 ZBTB47Q9UFB7 747 aaPredicted RBP22■■□□□ 1.11
AFTPH-201ENST00000238855 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
AFTPH-201ENST00000238855 DHX57Q6P158 1386 aaKnown RBP21.97■■□□□ 1.11
AFTPH-201ENST00000238855 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
AFTPH-201ENST00000238855 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
AFTPH-201ENST00000238855 TONSLQ96HA7 1378 aa21.95■■□□□ 1.11
AFTPH-201ENST00000238855 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
AFTPH-201ENST00000238855 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
AFTPH-201ENST00000238855 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
AFTPH-201ENST00000238855 ANO8Q9HCE9 1232 aaPredicted RBP21.9■■□□□ 1.1
AFTPH-201ENST00000238855 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
AFTPH-201ENST00000238855 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
AFTPH-201ENST00000238855 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.14e-9■■■■□ 23.1
AFTPH-201ENST00000238855 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
AFTPH-201ENST00000238855 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
AFTPH-201ENST00000238855 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
AFTPH-201ENST00000238855 FOXD1Q16676 465 aa21.8■■□□□ 1.08
AFTPH-201ENST00000238855 MSH5O43196 834 aa21.8■■□□□ 1.08
AFTPH-201ENST00000238855 LRRC9Q6ZRR7 1453 aa21.78■■□□□ 1.08
AFTPH-201ENST00000238855 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
AFTPH-201ENST00000238855 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
AFTPH-201ENST00000238855 PPP4R2Q9NY27 417 aa21.76■■□□□ 1.07
AFTPH-201ENST00000238855 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
AFTPH-201ENST00000238855 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
AFTPH-201ENST00000238855 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
AFTPH-201ENST00000238855 SLC4A1APQ9BWU0 796 aaKnown RBP21.73■■□□□ 1.07
AFTPH-201ENST00000238855 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
AFTPH-201ENST00000238855 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
AFTPH-201ENST00000238855 NEFMP07197 916 aa21.69■■□□□ 1.06
AFTPH-201ENST00000238855 ARXQ96QS3 562 aa21.69■■□□□ 1.06
AFTPH-201ENST00000238855 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
AFTPH-201ENST00000238855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.64■■□□□ 1.05
AFTPH-201ENST00000238855 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
AFTPH-201ENST00000238855 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
AFTPH-201ENST00000238855 TIAM1Q13009 1591 aa21.62■■□□□ 1.05
AFTPH-201ENST00000238855 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
AFTPH-201ENST00000238855 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
AFTPH-201ENST00000238855 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
AFTPH-201ENST00000238855 KDM2AQ9Y2K7 1162 aa21.61■■□□□ 1.05
AFTPH-201ENST00000238855 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
AFTPH-201ENST00000238855 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.05
AFTPH-201ENST00000238855 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.05
AFTPH-201ENST00000238855 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
AFTPH-201ENST00000238855 CCER2I3L3R5 266 aa21.57■■□□□ 1.04
AFTPH-201ENST00000238855 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
AFTPH-201ENST00000238855 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
AFTPH-201ENST00000238855 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
AFTPH-201ENST00000238855 MPHOSPH9Q99550 1183 aa21.53■■□□□ 1.04
AFTPH-201ENST00000238855 EIF4G2P78344 907 aaKnown RBP eCLIP21.51■■□□□ 1.03
AFTPH-201ENST00000238855 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
AFTPH-201ENST00000238855 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
AFTPH-201ENST00000238855 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
AFTPH-201ENST00000238855 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
AFTPH-201ENST00000238855 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
AFTPH-201ENST00000238855 CCDC18Q5T9S5 1454 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms