RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
DENND1B-201ENST00000235453 CFTRP13569 1480 aa13.99□□□□□ -0.17
DENND1B-201ENST00000235453 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.17
DENND1B-201ENST00000235453 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
DENND1B-201ENST00000235453 IL27Q8NEV9 243 aa13.95□□□□□ -0.18
DENND1B-201ENST00000235453 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
DENND1B-201ENST00000235453 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
DENND1B-201ENST00000235453 KIF21BO75037 1637 aa13.94□□□□□ -0.18
DENND1B-201ENST00000235453 ITGAEP38570 1179 aa13.94□□□□□ -0.18
DENND1B-201ENST00000235453 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
DENND1B-201ENST00000235453 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
DENND1B-201ENST00000235453 WASHC2CQ9Y4E1 1318 aa13.92□□□□□ -0.18
DENND1B-201ENST00000235453 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
DENND1B-201ENST00000235453 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
DENND1B-201ENST00000235453 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
DENND1B-201ENST00000235453 USP35Q9P2H5 1018 aa13.89□□□□□ -0.19
DENND1B-201ENST00000235453 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
DENND1B-201ENST00000235453 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
DENND1B-201ENST00000235453 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
DENND1B-201ENST00000235453 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
DENND1B-201ENST00000235453 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
DENND1B-201ENST00000235453 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
DENND1B-201ENST00000235453 CLIP1P30622 1438 aa13.85□□□□□ -0.19
DENND1B-201ENST00000235453 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
DENND1B-201ENST00000235453 NESP48681 1621 aa13.84□□□□□ -0.19
DENND1B-201ENST00000235453 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.19
DENND1B-201ENST00000235453 NBR1Q14596 966 aa13.82□□□□□ -0.2
DENND1B-201ENST00000235453 CUX2O14529 1486 aa13.81□□□□□ -0.2
DENND1B-201ENST00000235453 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
DENND1B-201ENST00000235453 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
DENND1B-201ENST00000235453 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
DENND1B-201ENST00000235453 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
DENND1B-201ENST00000235453 IPO9Q96P70 1041 aaKnown RBP13.79□□□□□ -0.2
DENND1B-201ENST00000235453 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
DENND1B-201ENST00000235453 FANCD2Q9BXW9 1451 aa13.77□□□□□ -0.2
DENND1B-201ENST00000235453 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
DENND1B-201ENST00000235453 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
DENND1B-201ENST00000235453 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
DENND1B-201ENST00000235453 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
DENND1B-201ENST00000235453 ANP32AP39687 249 aaKnown RBP13.72□□□□□ -0.21
DENND1B-201ENST00000235453 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
DENND1B-201ENST00000235453 IGF1RP08069 1367 aa13.7□□□□□ -0.22
DENND1B-201ENST00000235453 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
DENND1B-201ENST00000235453 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
DENND1B-201ENST00000235453 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
DENND1B-201ENST00000235453 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
DENND1B-201ENST00000235453 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
DENND1B-201ENST00000235453 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
DENND1B-201ENST00000235453 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
DENND1B-201ENST00000235453 ANP32CO43423 234 aa13.65□□□□□ -0.22
DENND1B-201ENST00000235453 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
DENND1B-201ENST00000235453 PPM1GO15355 546 aaPredicted RBP13.65□□□□□ -0.22
DENND1B-201ENST00000235453 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
DENND1B-201ENST00000235453 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
DENND1B-201ENST00000235453 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
DENND1B-201ENST00000235453 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
DENND1B-201ENST00000235453 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
DENND1B-201ENST00000235453 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
DENND1B-201ENST00000235453 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
DENND1B-201ENST00000235453 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
DENND1B-201ENST00000235453 KANK4Q5T7N3 995 aaPredicted RBP13.61□□□□□ -0.23
DENND1B-201ENST00000235453 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
DENND1B-201ENST00000235453 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
DENND1B-201ENST00000235453 GSE1Q14687 1217 aa13.58□□□□□ -0.24
DENND1B-201ENST00000235453 MAPKBP1O60336 1514 aa13.58□□□□□ -0.24
DENND1B-201ENST00000235453 NEFMP07197 916 aa13.57□□□□□ -0.24
DENND1B-201ENST00000235453 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
DENND1B-201ENST00000235453 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
DENND1B-201ENST00000235453 RRP9O43818 475 aaKnown RBP13.55□□□□□ -0.24
DENND1B-201ENST00000235453 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
DENND1B-201ENST00000235453 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
DENND1B-201ENST00000235453 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
DENND1B-201ENST00000235453 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
DENND1B-201ENST00000235453 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
DENND1B-201ENST00000235453 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
DENND1B-201ENST00000235453 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
DENND1B-201ENST00000235453 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
DENND1B-201ENST00000235453 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
DENND1B-201ENST00000235453 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
DENND1B-201ENST00000235453 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
DENND1B-201ENST00000235453 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
DENND1B-201ENST00000235453 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
DENND1B-201ENST00000235453 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
DENND1B-201ENST00000235453 CUL7Q14999 1698 aa13.44□□□□□ -0.26
DENND1B-201ENST00000235453 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
DENND1B-201ENST00000235453 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
DENND1B-201ENST00000235453 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
DENND1B-201ENST00000235453 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
DENND1B-201ENST00000235453 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
DENND1B-201ENST00000235453 CTTNBP2Q8WZ74 1663 aa13.42□□□□□ -0.26
DENND1B-201ENST00000235453 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
DENND1B-201ENST00000235453 FGD1P98174 961 aa13.41□□□□□ -0.26
DENND1B-201ENST00000235453 AAMPQ13685 434 aa13.41□□□□□ -0.26
DENND1B-201ENST00000235453 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
DENND1B-201ENST00000235453 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
DENND1B-201ENST00000235453 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
DENND1B-201ENST00000235453 MS4A1P11836 297 aa13.39□□□□□ -0.27
DENND1B-201ENST00000235453 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
DENND1B-201ENST00000235453 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
DENND1B-201ENST00000235453 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms