RNA–Protein interactions for RNA: ENST00000234626.10

CDC7-201, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-201ENST00000234626 CARMIL1Q5VZK9 1371 aa10.17□□□□□ -0.78
CDC7-201ENST00000234626 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CDC7-201ENST00000234626 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
CDC7-201ENST00000234626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDC7-201ENST00000234626 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
CDC7-201ENST00000234626 LRRC9Q6ZRR7 1453 aa10.13□□□□□ -0.79
CDC7-201ENST00000234626 CASKIN1Q8WXD9 1431 aa10.13□□□□□ -0.79
CDC7-201ENST00000234626 UGGT2Q9NYU1 1516 aa10.11□□□□□ -0.79
CDC7-201ENST00000234626 GAPVD1Q14C86 1478 aa10.11□□□□□ -0.79
CDC7-201ENST00000234626 UBTFP17480 764 aaKnown RBP10.09□□□□□ -0.79
CDC7-201ENST00000234626 FHAD1B1AJZ9 1412 aa10.09□□□□□ -0.79
CDC7-201ENST00000234626 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
CDC7-201ENST00000234626 IFT140Q96RY7 1462 aa10.07□□□□□ -0.8
CDC7-201ENST00000234626 IQGAP2Q13576 1575 aa10.06□□□□□ -0.8
CDC7-201ENST00000234626 ADCY10Q96PN6 1610 aa10.06□□□□□ -0.8
CDC7-201ENST00000234626 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
CDC7-201ENST00000234626 CLSPNQ9HAW4 1339 aa10.05□□□□□ -0.8
CDC7-201ENST00000234626 SUPT6HQ7KZ85 1726 aaKnown RBP10.04□□□□□ -0.8
CDC7-201ENST00000234626 MAPKBP1O60336 1514 aa10.03□□□□□ -0.8
CDC7-201ENST00000234626 KIAA0556O60303 1618 aa10.03□□□□□ -0.8
CDC7-201ENST00000234626 HECW1Q76N89 1606 aa10.03□□□□□ -0.8
CDC7-201ENST00000234626 MAGI3Q5TCQ9 1506 aa10.03□□□□□ -0.8
CDC7-201ENST00000234626 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.8
CDC7-201ENST00000234626 EHBP1L1Q8N3D4 1523 aa10.02□□□□□ -0.81
CDC7-201ENST00000234626 DNAJC5BQ9UF47 199 aa10.01□□□□□ -0.81
CDC7-201ENST00000234626 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
CDC7-201ENST00000234626 FMN1Q68DA7 1419 aa10□□□□□ -0.81
CDC7-201ENST00000234626 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
CDC7-201ENST00000234626 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
CDC7-201ENST00000234626 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
CDC7-201ENST00000234626 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
CDC7-201ENST00000234626 CCNB3Q8WWL7 1395 aa9.98□□□□□ -0.81
CDC7-201ENST00000234626 CROCC2H7BZ55 1655 aa9.98□□□□□ -0.81
CDC7-201ENST00000234626 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
CDC7-201ENST00000234626 SHROOM2Q13796 1616 aa9.97□□□□□ -0.81
CDC7-201ENST00000234626 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
CDC7-201ENST00000234626 PHLDB1Q86UU1 1377 aa9.96□□□□□ -0.81
CDC7-201ENST00000234626 FHOD3Q2V2M9 1422 aa9.95□□□□□ -0.82
CDC7-201ENST00000234626 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
CDC7-201ENST00000234626 PTPN23Q9H3S7 1636 aa9.95□□□□□ -0.82
CDC7-201ENST00000234626 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
CDC7-201ENST00000234626 ZNF608Q9ULD9 1512 aaPredicted RBP9.94□□□□□ -0.82
CDC7-201ENST00000234626 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
CDC7-201ENST00000234626 NUP160Q12769 1436 aa9.93□□□□□ -0.82
CDC7-201ENST00000234626 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
CDC7-201ENST00000234626 KDM5BQ9UGL1 1544 aa9.92□□□□□ -0.82
CDC7-201ENST00000234626 ADGBQ8N7X0 1667 aa9.91□□□□□ -0.82
CDC7-201ENST00000234626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
CDC7-201ENST00000234626 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
CDC7-201ENST00000234626 EPRSP07814 1512 aaKnown RBP9.9□□□□□ -0.82
CDC7-201ENST00000234626 DNMT1P26358 1616 aaKnown RBP9.9□□□□□ -0.82
CDC7-201ENST00000234626 ABCA8O94911 1581 aa9.9□□□□□ -0.82
CDC7-201ENST00000234626 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
CDC7-201ENST00000234626 ITSN2Q9NZM3 1697 aa9.89□□□□□ -0.83
CDC7-201ENST00000234626 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
CDC7-201ENST00000234626 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
CDC7-201ENST00000234626 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
CDC7-201ENST00000234626 HFM1A2PYH4 1435 aa9.87□□□□□ -0.83
CDC7-201ENST00000234626 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
CDC7-201ENST00000234626 CDC42BPAQ5VT25 1732 aa9.87□□□□□ -0.83
CDC7-201ENST00000234626 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
CDC7-201ENST00000234626 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
CDC7-201ENST00000234626 CHD1O14646 1710 aa9.86□□□□□ -0.83
CDC7-201ENST00000234626 MIA2Q96PC5 1412 aa9.86□□□□□ -0.83
CDC7-201ENST00000234626 NUP153P49790 1475 aaKnown RBP9.86□□□□□ -0.83
CDC7-201ENST00000234626 SETD5Q9C0A6 1442 aa9.86□□□□□ -0.83
CDC7-201ENST00000234626 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
CDC7-201ENST00000234626 KDM6BO15054 1643 aa9.83□□□□□ -0.84
CDC7-201ENST00000234626 RAB3GAP2Q9H2M9 1393 aa9.83□□□□□ -0.84
CDC7-201ENST00000234626 NAIPQ13075 1403 aa9.81□□□□□ -0.84
CDC7-201ENST00000234626 CDK13Q14004 1512 aaKnown RBP9.8□□□□□ -0.84
CDC7-201ENST00000234626 ADGRL2O95490 1459 aa9.79□□□□□ -0.84
CDC7-201ENST00000234626 CLASP1Q7Z460 1538 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 KIF14Q15058 1648 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 CDC42BPBQ9Y5S2 1711 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 APLP2Q06481 763 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
CDC7-201ENST00000234626 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.84
CDC7-201ENST00000234626 ROCK1Q13464 1354 aa9.77□□□□□ -0.85
CDC7-201ENST00000234626 ARHGEF5Q12774 1597 aa9.77□□□□□ -0.85
CDC7-201ENST00000234626 PREX2Q70Z35 1606 aa9.77□□□□□ -0.85
CDC7-201ENST00000234626 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
CDC7-201ENST00000234626 ZNF316A6NFI3 1004 aaPredicted RBP9.75□□□□□ -0.85
CDC7-201ENST00000234626 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
CDC7-201ENST00000234626 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
CDC7-201ENST00000234626 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.85
CDC7-201ENST00000234626 TROQ12816 1431 aaPredicted RBP9.71□□□□□ -0.86
CDC7-201ENST00000234626 DAPK1P53355 1430 aa9.7□□□□□ -0.86
CDC7-201ENST00000234626 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
CDC7-201ENST00000234626 ERCC6Q03468 1493 aa9.69□□□□□ -0.86
CDC7-201ENST00000234626 ABCC5O15440 1437 aa9.69□□□□□ -0.86
CDC7-201ENST00000234626 MBD5Q9P267 1494 aa9.68□□□□□ -0.86
CDC7-201ENST00000234626 UNC13BO14795 1591 aa9.68□□□□□ -0.86
CDC7-201ENST00000234626 PLXNC1O60486 1568 aa9.68□□□□□ -0.86
CDC7-201ENST00000234626 UHRF1BP1LA0JNW5 1464 aa9.67□□□□□ -0.86
CDC7-201ENST00000234626 CAMSAP2Q08AD1 1489 aa9.67□□□□□ -0.86
CDC7-201ENST00000234626 MTUS2Q5JR59 1369 aa9.67□□□□□ -0.86
CDC7-201ENST00000234626 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
CDC7-201ENST00000234626 SAMD9LQ8IVG5 1584 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms