RNA–Protein interactions for RNA: ENST00000231137.5

PCDHB7-201, Transcript of protocadherin beta 7, humanhuman

APPRIS P1 BASIC

Gene PCDHB7, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7-201ENST00000231137 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
PCDHB7-201ENST00000231137 ARAP1Q96P48 1450 aa18.76■□□□□ 0.59
PCDHB7-201ENST00000231137 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
PCDHB7-201ENST00000231137 IFT140Q96RY7 1462 aa18.73■□□□□ 0.59
PCDHB7-201ENST00000231137 ZNF608Q9ULD9 1512 aaPredicted RBP18.73■□□□□ 0.59
PCDHB7-201ENST00000231137 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
PCDHB7-201ENST00000231137 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
PCDHB7-201ENST00000231137 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
PCDHB7-201ENST00000231137 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
PCDHB7-201ENST00000231137 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
PCDHB7-201ENST00000231137 CCNB3Q8WWL7 1395 aa18.69■□□□□ 0.58
PCDHB7-201ENST00000231137 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
PCDHB7-201ENST00000231137 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
PCDHB7-201ENST00000231137 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
PCDHB7-201ENST00000231137 TRIM52Q96A61 297 aa18.68■□□□□ 0.58
PCDHB7-201ENST00000231137 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
PCDHB7-201ENST00000231137 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
PCDHB7-201ENST00000231137 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
PCDHB7-201ENST00000231137 ERICH3Q5RHP9 1530 aa18.63■□□□□ 0.57
PCDHB7-201ENST00000231137 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
PCDHB7-201ENST00000231137 MIER1Q8N108 512 aa18.61■□□□□ 0.57
PCDHB7-201ENST00000231137 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
PCDHB7-201ENST00000231137 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
PCDHB7-201ENST00000231137 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
PCDHB7-201ENST00000231137 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
PCDHB7-201ENST00000231137 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.56
PCDHB7-201ENST00000231137 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
PCDHB7-201ENST00000231137 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
PCDHB7-201ENST00000231137 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
PCDHB7-201ENST00000231137 GTF3C3Q9Y5Q9 886 aa18.52■□□□□ 0.56
PCDHB7-201ENST00000231137 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.55
PCDHB7-201ENST00000231137 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.55
PCDHB7-201ENST00000231137 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
PCDHB7-201ENST00000231137 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
PCDHB7-201ENST00000231137 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
PCDHB7-201ENST00000231137 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
PCDHB7-201ENST00000231137 WDR62O43379 1518 aa18.48■□□□□ 0.55
PCDHB7-201ENST00000231137 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
PCDHB7-201ENST00000231137 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
PCDHB7-201ENST00000231137 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
PCDHB7-201ENST00000231137 DDX10Q13206 875 aaKnown RBP18.43■□□□□ 0.54
PCDHB7-201ENST00000231137 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
PCDHB7-201ENST00000231137 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
PCDHB7-201ENST00000231137 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
PCDHB7-201ENST00000231137 ZNF326Q5BKZ1 582 aaKnown RBP18.38■□□□□ 0.53
PCDHB7-201ENST00000231137 PTPRGP23470 1445 aa18.37■□□□□ 0.53
PCDHB7-201ENST00000231137 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
PCDHB7-201ENST00000231137 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
PCDHB7-201ENST00000231137 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
PCDHB7-201ENST00000231137 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
PCDHB7-201ENST00000231137 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PCDHB7-201ENST00000231137 CUL7Q14999 1698 aa18.34■□□□□ 0.53
PCDHB7-201ENST00000231137 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
PCDHB7-201ENST00000231137 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
PCDHB7-201ENST00000231137 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
PCDHB7-201ENST00000231137 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
PCDHB7-201ENST00000231137 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
PCDHB7-201ENST00000231137 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
PCDHB7-201ENST00000231137 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
PCDHB7-201ENST00000231137 FOXD1Q16676 465 aa18.31■□□□□ 0.52
PCDHB7-201ENST00000231137 THOC2Q8NI27 1593 aaKnown RBP18.29■□□□□ 0.52
PCDHB7-201ENST00000231137 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
PCDHB7-201ENST00000231137 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
PCDHB7-201ENST00000231137 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
PCDHB7-201ENST00000231137 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
PCDHB7-201ENST00000231137 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
PCDHB7-201ENST00000231137 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
PCDHB7-201ENST00000231137 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
PCDHB7-201ENST00000231137 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
PCDHB7-201ENST00000231137 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
PCDHB7-201ENST00000231137 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
PCDHB7-201ENST00000231137 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
PCDHB7-201ENST00000231137 ANP32CO43423 234 aa18.18■□□□□ 0.5
PCDHB7-201ENST00000231137 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
PCDHB7-201ENST00000231137 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
PCDHB7-201ENST00000231137 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
PCDHB7-201ENST00000231137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHB7-201ENST00000231137 NCOA2Q15596 1464 aa18.14■□□□□ 0.5
PCDHB7-201ENST00000231137 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
PCDHB7-201ENST00000231137 BCANQ96GW7 911 aa18.12■□□□□ 0.49
PCDHB7-201ENST00000231137 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
PCDHB7-201ENST00000231137 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
PCDHB7-201ENST00000231137 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
PCDHB7-201ENST00000231137 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
PCDHB7-201ENST00000231137 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
PCDHB7-201ENST00000231137 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.48
PCDHB7-201ENST00000231137 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
PCDHB7-201ENST00000231137 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
PCDHB7-201ENST00000231137 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
PCDHB7-201ENST00000231137 NUP160Q12769 1436 aa18.04■□□□□ 0.48
PCDHB7-201ENST00000231137 NEFLP07196 543 aa18.02■□□□□ 0.48
PCDHB7-201ENST00000231137 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.48
PCDHB7-201ENST00000231137 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.47
PCDHB7-201ENST00000231137 CEP170Q5SW79 1584 aa18■□□□□ 0.47
PCDHB7-201ENST00000231137 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
PCDHB7-201ENST00000231137 MAP3K1Q13233 1512 aa18■□□□□ 0.47
PCDHB7-201ENST00000231137 UACAQ9BZF9 1416 aa18■□□□□ 0.47
PCDHB7-201ENST00000231137 EIF4G2P78344 907 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHB7-201ENST00000231137 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
PCDHB7-201ENST00000231137 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms