RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
PTK7-202ENST00000230419 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
PTK7-202ENST00000230419 FOXD1Q16676 465 aa23.3■■□□□ 1.32
PTK7-202ENST00000230419 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
PTK7-202ENST00000230419 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
PTK7-202ENST00000230419 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
PTK7-202ENST00000230419 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
PTK7-202ENST00000230419 KCNH8Q96L42 1107 aa23.21■■□□□ 1.31
PTK7-202ENST00000230419 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
PTK7-202ENST00000230419 FHOD3Q2V2M9 1422 aa23.19■■□□□ 1.3
PTK7-202ENST00000230419 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
PTK7-202ENST00000230419 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
PTK7-202ENST00000230419 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.29
PTK7-202ENST00000230419 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
PTK7-202ENST00000230419 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
PTK7-202ENST00000230419 IGF1RP08069 1367 aa23.05■■□□□ 1.28
PTK7-202ENST00000230419 CFDP1Q9UEE9 299 aaPredicted RBP23.05■■□□□ 1.28
PTK7-202ENST00000230419 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
PTK7-202ENST00000230419 MYT1Q01538 1121 aa23.02■■□□□ 1.27
PTK7-202ENST00000230419 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
PTK7-202ENST00000230419 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
PTK7-202ENST00000230419 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
PTK7-202ENST00000230419 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
PTK7-202ENST00000230419 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
PTK7-202ENST00000230419 EIF4G2P78344 907 aaKnown RBP eCLIP22.97■■□□□ 1.27
PTK7-202ENST00000230419 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
PTK7-202ENST00000230419 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
PTK7-202ENST00000230419 NESP48681 1621 aa22.95■■□□□ 1.26
PTK7-202ENST00000230419 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
PTK7-202ENST00000230419 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
PTK7-202ENST00000230419 KIF21BO75037 1637 aa22.93■■□□□ 1.26
PTK7-202ENST00000230419 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
PTK7-202ENST00000230419 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
PTK7-202ENST00000230419 DAXXQ9UER7 740 aaPredicted RBP22.9■■□□□ 1.26
PTK7-202ENST00000230419 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
PTK7-202ENST00000230419 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
PTK7-202ENST00000230419 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
PTK7-202ENST00000230419 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
PTK7-202ENST00000230419 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
PTK7-202ENST00000230419 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
PTK7-202ENST00000230419 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
PTK7-202ENST00000230419 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
PTK7-202ENST00000230419 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
PTK7-202ENST00000230419 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
PTK7-202ENST00000230419 PPP1R15AO75807 674 aaPredicted RBP22.8■■□□□ 1.24
PTK7-202ENST00000230419 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
PTK7-202ENST00000230419 CUX1P39880 1505 aa22.78■■□□□ 1.24
PTK7-202ENST00000230419 ZNF644Q9H582 1327 aaPredicted RBP22.78■■□□□ 1.24
PTK7-202ENST00000230419 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
PTK7-202ENST00000230419 MPHOSPH9Q99550 1183 aa22.75■■□□□ 1.23
PTK7-202ENST00000230419 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
PTK7-202ENST00000230419 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
PTK7-202ENST00000230419 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
PTK7-202ENST00000230419 PKD2Q13563 968 aa22.71■■□□□ 1.23
PTK7-202ENST00000230419 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.232e-6■■■■■ 31
PTK7-202ENST00000230419 CFTRP13569 1480 aa22.7■■□□□ 1.22
PTK7-202ENST00000230419 DCAF11Q8TEB1 546 aa22.7■■□□□ 1.22
PTK7-202ENST00000230419 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
PTK7-202ENST00000230419 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
PTK7-202ENST00000230419 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.221e-6■■□□□ 14.4
PTK7-202ENST00000230419 CCDC136Q96JN2 1154 aa22.66■■□□□ 1.22
PTK7-202ENST00000230419 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
PTK7-202ENST00000230419 JPH4Q96JJ6 628 aa22.61■■□□□ 1.21
PTK7-202ENST00000230419 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
PTK7-202ENST00000230419 TOP2BQ02880 1626 aa22.58■■□□□ 1.21
PTK7-202ENST00000230419 NPM1P06748 294 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTK7-202ENST00000230419 CC2D1BQ5T0F9 858 aaKnown RBP22.57■■□□□ 1.2
PTK7-202ENST00000230419 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
PTK7-202ENST00000230419 B4GALNT3Q6L9W6 998 aa22.55■■□□□ 1.2
PTK7-202ENST00000230419 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
PTK7-202ENST00000230419 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
PTK7-202ENST00000230419 NBR1Q14596 966 aa22.5■■□□□ 1.19
PTK7-202ENST00000230419 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
PTK7-202ENST00000230419 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
PTK7-202ENST00000230419 NUP155O75694 1391 aa22.49■■□□□ 1.19
PTK7-202ENST00000230419 TNNT2P45379 298 aaPredicted RBP22.49■■□□□ 1.19
PTK7-202ENST00000230419 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
PTK7-202ENST00000230419 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
PTK7-202ENST00000230419 WDR43Q15061 677 aaKnown RBP eCLIP22.43■■□□□ 1.18
PTK7-202ENST00000230419 CCDC18Q5T9S5 1454 aa22.42■■□□□ 1.18
PTK7-202ENST00000230419 FGD6Q6ZV73 1430 aa22.42■■□□□ 1.18
PTK7-202ENST00000230419 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
PTK7-202ENST00000230419 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
PTK7-202ENST00000230419 CCER2I3L3R5 266 aa22.39■■□□□ 1.18
PTK7-202ENST00000230419 SLC24A1O60721 1099 aa22.38■■□□□ 1.17
PTK7-202ENST00000230419 RRBP1Q9P2E9 1410 aaKnown RBP22.38■■□□□ 1.17
PTK7-202ENST00000230419 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
PTK7-202ENST00000230419 SAFB2Q14151 953 aaKnown RBP eCLIP22.37■■□□□ 1.17
PTK7-202ENST00000230419 PLEKHG5O94827 1062 aa22.37■■□□□ 1.17
PTK7-202ENST00000230419 NUTM2DQ5VT03 806 aaPredicted RBP22.34■■□□□ 1.17
PTK7-202ENST00000230419 HMGXB3Q12766 1538 aa22.33■■□□□ 1.17
PTK7-202ENST00000230419 ST20-MTHFSA0A0A6YYL1 179 aa22.33■■□□□ 1.16
PTK7-202ENST00000230419 GGT6Q6P531 493 aa22.33■■□□□ 1.16
PTK7-202ENST00000230419 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
PTK7-202ENST00000230419 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
PTK7-202ENST00000230419 CARMIL2Q6F5E8 1435 aa22.28■■□□□ 1.16
PTK7-202ENST00000230419 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
PTK7-202ENST00000230419 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
PTK7-202ENST00000230419 MYOM3Q5VTT5 1437 aa22.27■■□□□ 1.16
PTK7-202ENST00000230419 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms