RNA–Protein interactions for RNA: ENST00000229554.9

RSPH4A-201, Transcript of radial spoke head component 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPH4A, Length 2,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH4A-201ENST00000229554 FKBP8Q14318 412 aa11.38□□□□□ -0.59
RSPH4A-201ENST00000229554 CUX1P39880 1505 aa11.35□□□□□ -0.59
RSPH4A-201ENST00000229554 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
RSPH4A-201ENST00000229554 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
RSPH4A-201ENST00000229554 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.6
RSPH4A-201ENST00000229554 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
RSPH4A-201ENST00000229554 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
RSPH4A-201ENST00000229554 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.6
RSPH4A-201ENST00000229554 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
RSPH4A-201ENST00000229554 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
RSPH4A-201ENST00000229554 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
RSPH4A-201ENST00000229554 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
RSPH4A-201ENST00000229554 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
RSPH4A-201ENST00000229554 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
RSPH4A-201ENST00000229554 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
RSPH4A-201ENST00000229554 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
RSPH4A-201ENST00000229554 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
RSPH4A-201ENST00000229554 CUX2O14529 1486 aa11.21□□□□□ -0.61
RSPH4A-201ENST00000229554 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
RSPH4A-201ENST00000229554 ANP32EQ9BTT0 268 aa11.2□□□□□ -0.62
RSPH4A-201ENST00000229554 NEFLP07196 543 aa11.19□□□□□ -0.62
RSPH4A-201ENST00000229554 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
RSPH4A-201ENST00000229554 ANP32CO43423 234 aa11.18□□□□□ -0.62
RSPH4A-201ENST00000229554 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
RSPH4A-201ENST00000229554 IGF1RP08069 1367 aa11.17□□□□□ -0.62
RSPH4A-201ENST00000229554 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
RSPH4A-201ENST00000229554 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
RSPH4A-201ENST00000229554 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
RSPH4A-201ENST00000229554 CC2D2AQ9P2K1 1620 aa11.15□□□□□ -0.62
RSPH4A-201ENST00000229554 FHOD3Q2V2M9 1422 aa11.15□□□□□ -0.62
RSPH4A-201ENST00000229554 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
RSPH4A-201ENST00000229554 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.63
RSPH4A-201ENST00000229554 FGD5Q6ZNL6 1462 aa11.14□□□□□ -0.63
RSPH4A-201ENST00000229554 CUL7Q14999 1698 aa11.12□□□□□ -0.63
RSPH4A-201ENST00000229554 RRP7BPQ9NSQ0 103 aa11.12□□□□□ -0.63
RSPH4A-201ENST00000229554 TIAM1Q13009 1591 aa11.12□□□□□ -0.63
RSPH4A-201ENST00000229554 FOXD1Q16676 465 aa11.12□□□□□ -0.63
RSPH4A-201ENST00000229554 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
RSPH4A-201ENST00000229554 UBE2Q2Q8WVN8 375 aa11.11□□□□□ -0.63
RSPH4A-201ENST00000229554 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
RSPH4A-201ENST00000229554 FHAD1B1AJZ9 1412 aa11.11□□□□□ -0.63
RSPH4A-201ENST00000229554 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
RSPH4A-201ENST00000229554 ABCA10Q8WWZ4 1543 aa11.1□□□□□ -0.63
RSPH4A-201ENST00000229554 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
RSPH4A-201ENST00000229554 EFCAB5A4FU69 1503 aa11.1□□□□□ -0.63
RSPH4A-201ENST00000229554 CCDC184Q52MB2 194 aa11.09□□□□□ -0.63
RSPH4A-201ENST00000229554 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
RSPH4A-201ENST00000229554 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
RSPH4A-201ENST00000229554 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
RSPH4A-201ENST00000229554 FAM9BQ8IZU0 186 aa11.07□□□□□ -0.64
RSPH4A-201ENST00000229554 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
RSPH4A-201ENST00000229554 RAD54L2Q9Y4B4 1467 aa11.07□□□□□ -0.64
RSPH4A-201ENST00000229554 MSH5O43196 834 aa11.07□□□□□ -0.64
RSPH4A-201ENST00000229554 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
RSPH4A-201ENST00000229554 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
RSPH4A-201ENST00000229554 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
RSPH4A-201ENST00000229554 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
RSPH4A-201ENST00000229554 PCF11O94913 1555 aaKnown RBP11.03□□□□□ -0.64
RSPH4A-201ENST00000229554 PTPRKQ15262 1439 aa11.02□□□□□ -0.64
RSPH4A-201ENST00000229554 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.64
RSPH4A-201ENST00000229554 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
RSPH4A-201ENST00000229554 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
RSPH4A-201ENST00000229554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.65
RSPH4A-201ENST00000229554 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
RSPH4A-201ENST00000229554 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
RSPH4A-201ENST00000229554 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 KIF21AQ7Z4S6 1674 aa10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 TDRD9Q8NDG6 1382 aaKnown RBP10.99□□□□□ -0.65
RSPH4A-201ENST00000229554 CASKIN1Q8WXD9 1431 aa10.98□□□□□ -0.65
RSPH4A-201ENST00000229554 ABCA5Q8WWZ7 1642 aa10.98□□□□□ -0.65
RSPH4A-201ENST00000229554 CCDC18Q5T9S5 1454 aa10.97□□□□□ -0.65
RSPH4A-201ENST00000229554 THOC2Q8NI27 1593 aaKnown RBP10.97□□□□□ -0.65
RSPH4A-201ENST00000229554 FMN1Q68DA7 1419 aa10.96□□□□□ -0.65
RSPH4A-201ENST00000229554 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
RSPH4A-201ENST00000229554 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.66
RSPH4A-201ENST00000229554 NESP48681 1621 aa10.96□□□□□ -0.66
RSPH4A-201ENST00000229554 SAMD9Q5K651 1589 aa10.95□□□□□ -0.66
RSPH4A-201ENST00000229554 MRS2Q9HD23 443 aa10.95□□□□□ -0.66
RSPH4A-201ENST00000229554 FGD6Q6ZV73 1430 aa10.95□□□□□ -0.66
RSPH4A-201ENST00000229554 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
RSPH4A-201ENST00000229554 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
RSPH4A-201ENST00000229554 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
RSPH4A-201ENST00000229554 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
RSPH4A-201ENST00000229554 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
RSPH4A-201ENST00000229554 NBR1Q14596 966 aa10.91□□□□□ -0.66
RSPH4A-201ENST00000229554 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
RSPH4A-201ENST00000229554 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
RSPH4A-201ENST00000229554 PKNOX2Q96KN3 472 aa10.9□□□□□ -0.66
RSPH4A-201ENST00000229554 NAIPQ13075 1403 aa10.9□□□□□ -0.67
RSPH4A-201ENST00000229554 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.67
RSPH4A-201ENST00000229554 KLHL34Q8N239 644 aa10.9□□□□□ -0.67
RSPH4A-201ENST00000229554 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
RSPH4A-201ENST00000229554 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
RSPH4A-201ENST00000229554 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
RSPH4A-201ENST00000229554 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
RSPH4A-201ENST00000229554 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
RSPH4A-201ENST00000229554 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms