RNA–Protein interactions for RNA: ENST00000228682.6

GLI1-201, Transcript of GLI family zinc finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI1, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-201ENST00000228682 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.35
GLI1-201ENST00000228682 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
GLI1-201ENST00000228682 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
GLI1-201ENST00000228682 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
GLI1-201ENST00000228682 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
GLI1-201ENST00000228682 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
GLI1-201ENST00000228682 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
GLI1-201ENST00000228682 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
GLI1-201ENST00000228682 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
GLI1-201ENST00000228682 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
GLI1-201ENST00000228682 KIF21BO75037 1637 aa12.72□□□□□ -0.37
GLI1-201ENST00000228682 ADAMTS12P58397 1594 aa12.71□□□□□ -0.38
GLI1-201ENST00000228682 CUL7Q14999 1698 aa12.7□□□□□ -0.38
GLI1-201ENST00000228682 PRG4Q92954 1404 aaPredicted RBP12.68□□□□□ -0.38
GLI1-201ENST00000228682 ITGAEP38570 1179 aa12.67□□□□□ -0.38
GLI1-201ENST00000228682 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
GLI1-201ENST00000228682 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
GLI1-201ENST00000228682 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
GLI1-201ENST00000228682 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
GLI1-201ENST00000228682 ARHGAP35Q9NRY4 1499 aa12.63□□□□□ -0.39
GLI1-201ENST00000228682 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
GLI1-201ENST00000228682 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
GLI1-201ENST00000228682 PTPRGP23470 1445 aa12.62□□□□□ -0.39
GLI1-201ENST00000228682 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
GLI1-201ENST00000228682 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
GLI1-201ENST00000228682 CHD1O14646 1710 aa12.61□□□□□ -0.39
GLI1-201ENST00000228682 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
GLI1-201ENST00000228682 NUP160Q12769 1436 aa12.59□□□□□ -0.39
GLI1-201ENST00000228682 VPS8Q8N3P4 1428 aa12.57□□□□□ -0.4
GLI1-201ENST00000228682 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
GLI1-201ENST00000228682 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
GLI1-201ENST00000228682 MTUS2Q5JR59 1369 aa12.55□□□□□ -0.4
GLI1-201ENST00000228682 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
GLI1-201ENST00000228682 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
GLI1-201ENST00000228682 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
GLI1-201ENST00000228682 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
GLI1-201ENST00000228682 ERCC6L2Q5T890 1561 aa12.51□□□□□ -0.41
GLI1-201ENST00000228682 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
GLI1-201ENST00000228682 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
GLI1-201ENST00000228682 DISP1Q96F81 1524 aa12.49□□□□□ -0.41
GLI1-201ENST00000228682 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
GLI1-201ENST00000228682 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.41
GLI1-201ENST00000228682 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
GLI1-201ENST00000228682 UGGT2Q9NYU1 1516 aa12.45□□□□□ -0.42
GLI1-201ENST00000228682 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
GLI1-201ENST00000228682 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
GLI1-201ENST00000228682 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
GLI1-201ENST00000228682 CHIC2Q9UKJ5 165 aa12.42□□□□□ -0.42
GLI1-201ENST00000228682 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
GLI1-201ENST00000228682 PCF11O94913 1555 aaKnown RBP12.41□□□□□ -0.42
GLI1-201ENST00000228682 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
GLI1-201ENST00000228682 CFDP1Q9UEE9 299 aaPredicted RBP12.39□□□□□ -0.43
GLI1-201ENST00000228682 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
GLI1-201ENST00000228682 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
GLI1-201ENST00000228682 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
GLI1-201ENST00000228682 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
GLI1-201ENST00000228682 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
GLI1-201ENST00000228682 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
GLI1-201ENST00000228682 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
GLI1-201ENST00000228682 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
GLI1-201ENST00000228682 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
GLI1-201ENST00000228682 ATP10BO94823 1461 aa12.33□□□□□ -0.44
GLI1-201ENST00000228682 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
GLI1-201ENST00000228682 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
GLI1-201ENST00000228682 RAPGEF6Q8TEU7 1601 aa12.31□□□□□ -0.44
GLI1-201ENST00000228682 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
GLI1-201ENST00000228682 HECW1Q76N89 1606 aa12.3□□□□□ -0.44
GLI1-201ENST00000228682 RRP7BPQ9NSQ0 103 aa12.3□□□□□ -0.44
GLI1-201ENST00000228682 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
GLI1-201ENST00000228682 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
GLI1-201ENST00000228682 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.44
GLI1-201ENST00000228682 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.44
GLI1-201ENST00000228682 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.44
GLI1-201ENST00000228682 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
GLI1-201ENST00000228682 ASXL2Q76L83 1435 aa12.26□□□□□ -0.45
GLI1-201ENST00000228682 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
GLI1-201ENST00000228682 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
GLI1-201ENST00000228682 ABCC2Q92887 1545 aa12.25□□□□□ -0.45
GLI1-201ENST00000228682 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
GLI1-201ENST00000228682 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
GLI1-201ENST00000228682 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
GLI1-201ENST00000228682 EFCAB2Q5VUJ9 269 aa12.24□□□□□ -0.45
GLI1-201ENST00000228682 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
GLI1-201ENST00000228682 ABCA8O94911 1581 aa12.22□□□□□ -0.45
GLI1-201ENST00000228682 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
GLI1-201ENST00000228682 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
GLI1-201ENST00000228682 AFAP1Q8N556 730 aa12.21□□□□□ -0.45
GLI1-201ENST00000228682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
GLI1-201ENST00000228682 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
GLI1-201ENST00000228682 HRCP23327 699 aa12.19□□□□□ -0.46
GLI1-201ENST00000228682 ADCY10Q96PN6 1610 aa12.18□□□□□ -0.46
GLI1-201ENST00000228682 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
GLI1-201ENST00000228682 EHBP1L1Q8N3D4 1523 aa12.17□□□□□ -0.46
GLI1-201ENST00000228682 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
GLI1-201ENST00000228682 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
GLI1-201ENST00000228682 WDR7Q9Y4E6 1490 aa12.17□□□□□ -0.46
GLI1-201ENST00000228682 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
GLI1-201ENST00000228682 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
GLI1-201ENST00000228682 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
GLI1-201ENST00000228682 KIF14Q15058 1648 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms