RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
PXN-201ENST00000228307 ANP32CO43423 234 aa22.18■■□□□ 1.14
PXN-201ENST00000228307 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
PXN-201ENST00000228307 IGF1RP08069 1367 aa22.15■■□□□ 1.14
PXN-201ENST00000228307 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
PXN-201ENST00000228307 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
PXN-201ENST00000228307 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
PXN-201ENST00000228307 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
PXN-201ENST00000228307 TSHZ2Q9NRE2 1034 aa22.07■■□□□ 1.12
PXN-201ENST00000228307 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
PXN-201ENST00000228307 FHOD3Q2V2M9 1422 aa22.05■■□□□ 1.12
PXN-201ENST00000228307 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
PXN-201ENST00000228307 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
PXN-201ENST00000228307 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
PXN-201ENST00000228307 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
PXN-201ENST00000228307 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.11
PXN-201ENST00000228307 IRX6P78412 446 aaPredicted RBP22.01■■□□□ 1.11
PXN-201ENST00000228307 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
PXN-201ENST00000228307 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
PXN-201ENST00000228307 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
PXN-201ENST00000228307 KIF21BO75037 1637 aa21.96■■□□□ 1.11
PXN-201ENST00000228307 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
PXN-201ENST00000228307 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.1
PXN-201ENST00000228307 PRXQ9BXM0 1461 aa21.91■■□□□ 1.1
PXN-201ENST00000228307 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.13e-6■■■□□ 18.5
PXN-201ENST00000228307 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.09
PXN-201ENST00000228307 CCNB3Q8WWL7 1395 aa21.89■■□□□ 1.09
PXN-201ENST00000228307 POLA1P09884 1462 aaPredicted RBP21.86■■□□□ 1.09
PXN-201ENST00000228307 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
PXN-201ENST00000228307 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
PXN-201ENST00000228307 BCL11AQ9H165 835 aa21.84■■□□□ 1.09
PXN-201ENST00000228307 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
PXN-201ENST00000228307 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
PXN-201ENST00000228307 RBM19Q9Y4C8 960 aaKnown RBP21.81■■□□□ 1.08
PXN-201ENST00000228307 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
PXN-201ENST00000228307 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
PXN-201ENST00000228307 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
PXN-201ENST00000228307 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
PXN-201ENST00000228307 FOXD1Q16676 465 aa21.69■■□□□ 1.06
PXN-201ENST00000228307 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
PXN-201ENST00000228307 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
PXN-201ENST00000228307 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
PXN-201ENST00000228307 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
PXN-201ENST00000228307 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.06
PXN-201ENST00000228307 RTL5Q5HYW3 569 aaPredicted RBP21.64■■□□□ 1.05
PXN-201ENST00000228307 NBR1Q14596 966 aa21.64■■□□□ 1.05
PXN-201ENST00000228307 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
PXN-201ENST00000228307 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
PXN-201ENST00000228307 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.04
PXN-201ENST00000228307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.041e-6■■□□□ 11.9
PXN-201ENST00000228307 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
PXN-201ENST00000228307 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
PXN-201ENST00000228307 MRS2Q9HD23 443 aa21.55■■□□□ 1.04
PXN-201ENST00000228307 PLEKHD1A6NEE1 506 aa21.53■■□□□ 1.04
PXN-201ENST00000228307 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
PXN-201ENST00000228307 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
PXN-201ENST00000228307 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
PXN-201ENST00000228307 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
PXN-201ENST00000228307 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
PXN-201ENST00000228307 B4GALNT3Q6L9W6 998 aa21.49■■□□□ 1.03
PXN-201ENST00000228307 CCER2I3L3R5 266 aa21.49■■□□□ 1.03
PXN-201ENST00000228307 NPM2Q86SE8 214 aaKnown RBP21.49■■□□□ 1.03
PXN-201ENST00000228307 LRRC9Q6ZRR7 1453 aa21.47■■□□□ 1.03
PXN-201ENST00000228307 PPP1R15AO75807 674 aaPredicted RBP21.47■■□□□ 1.03
PXN-201ENST00000228307 KDM2AQ9Y2K7 1162 aa21.46■■□□□ 1.03
PXN-201ENST00000228307 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
PXN-201ENST00000228307 ANP32AP39687 249 aaKnown RBP21.44■■□□□ 1.02
PXN-201ENST00000228307 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
PXN-201ENST00000228307 EIF4G2P78344 907 aaKnown RBP eCLIP21.41■■□□□ 1.022e-7■■■■■ 49.6
PXN-201ENST00000228307 CCDC136Q96JN2 1154 aa21.41■■□□□ 1.02
PXN-201ENST00000228307 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
PXN-201ENST00000228307 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
PXN-201ENST00000228307 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
PXN-201ENST00000228307 SALL2Q9Y467 1007 aaPredicted RBP21.4■■□□□ 1.02
PXN-201ENST00000228307 PPP4R2Q9NY27 417 aa21.37■■□□□ 1.01
PXN-201ENST00000228307 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
PXN-201ENST00000228307 TIMELESSQ9UNS1 1208 aa21.35■■□□□ 1.01
PXN-201ENST00000228307 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
PXN-201ENST00000228307 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
PXN-201ENST00000228307 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
PXN-201ENST00000228307 PCF11O94913 1555 aaKnown RBP21.33■■□□□ 1
PXN-201ENST00000228307 HNRNPMP52272 730 aaKnown RBP eCLIP21.33■■□□□ 12e-6■■■■□ 25
PXN-201ENST00000228307 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
PXN-201ENST00000228307 RRBP1Q9P2E9 1410 aaKnown RBP21.32■■□□□ 1
PXN-201ENST00000228307 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
PXN-201ENST00000228307 TIAM1Q13009 1591 aa21.31■■□□□ 1
PXN-201ENST00000228307 ZBTB47Q9UFB7 747 aaPredicted RBP21.3■■□□□ 1
PXN-201ENST00000228307 HSPA5P11021 654 aaKnown RBP21.29■■□□□ 1
PXN-201ENST00000228307 FGD6Q6ZV73 1430 aa21.28■■□□□ 1
PXN-201ENST00000228307 DEKP35659 375 aaKnown RBP21.27■■□□□ 1
PXN-201ENST00000228307 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
PXN-201ENST00000228307 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
PXN-201ENST00000228307 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
PXN-201ENST00000228307 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
PXN-201ENST00000228307 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
PXN-201ENST00000228307 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
PXN-201ENST00000228307 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
PXN-201ENST00000228307 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
PXN-201ENST00000228307 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
PXN-201ENST00000228307 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms