RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 YTHDC1Q96MU7 727 aaKnown RBP25.88■■□□□ 1.73
PRPF19-201ENST00000227524 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
PRPF19-201ENST00000227524 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
PRPF19-201ENST00000227524 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
PRPF19-201ENST00000227524 CUL7Q14999 1698 aa25.81■■□□□ 1.72
PRPF19-201ENST00000227524 WDR62O43379 1518 aa25.8■■□□□ 1.72
PRPF19-201ENST00000227524 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
PRPF19-201ENST00000227524 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
PRPF19-201ENST00000227524 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
PRPF19-201ENST00000227524 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
PRPF19-201ENST00000227524 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
PRPF19-201ENST00000227524 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.7
PRPF19-201ENST00000227524 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
PRPF19-201ENST00000227524 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.698e-7■■■■□ 22.2
PRPF19-201ENST00000227524 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
PRPF19-201ENST00000227524 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
PRPF19-201ENST00000227524 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
PRPF19-201ENST00000227524 CTTNBP2Q8WZ74 1663 aa25.6■■□□□ 1.69
PRPF19-201ENST00000227524 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
PRPF19-201ENST00000227524 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
PRPF19-201ENST00000227524 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
PRPF19-201ENST00000227524 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
PRPF19-201ENST00000227524 MYT1Q01538 1121 aa25.48■■□□□ 1.67
PRPF19-201ENST00000227524 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
PRPF19-201ENST00000227524 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
PRPF19-201ENST00000227524 EFCAB5A4FU69 1503 aa25.45■■□□□ 1.66
PRPF19-201ENST00000227524 FHOD3Q2V2M9 1422 aa25.4■■□□□ 1.66
PRPF19-201ENST00000227524 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
PRPF19-201ENST00000227524 SAMD9Q5K651 1589 aa25.37■■□□□ 1.65
PRPF19-201ENST00000227524 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
PRPF19-201ENST00000227524 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
PRPF19-201ENST00000227524 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
PRPF19-201ENST00000227524 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
PRPF19-201ENST00000227524 MAPKBP1O60336 1514 aa25.29■■□□□ 1.64
PRPF19-201ENST00000227524 RAB3GAP2Q9H2M9 1393 aa25.27■■□□□ 1.64
PRPF19-201ENST00000227524 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
PRPF19-201ENST00000227524 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
PRPF19-201ENST00000227524 ITGAEP38570 1179 aa25.25■■□□□ 1.63
PRPF19-201ENST00000227524 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
PRPF19-201ENST00000227524 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
PRPF19-201ENST00000227524 FYCO1Q9BQS8 1478 aa25.23■■□□□ 1.63
PRPF19-201ENST00000227524 CFAP43Q8NDM7 1665 aa25.22■■□□□ 1.63
PRPF19-201ENST00000227524 FMN1Q68DA7 1419 aa25.21■■□□□ 1.63
PRPF19-201ENST00000227524 SUPT16HQ9Y5B9 1047 aaKnown RBP25.21■■□□□ 1.63
PRPF19-201ENST00000227524 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.63
PRPF19-201ENST00000227524 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
PRPF19-201ENST00000227524 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
PRPF19-201ENST00000227524 KIAA0586Q9BVV6 1533 aa25.16■■□□□ 1.62
PRPF19-201ENST00000227524 UGGT2Q9NYU1 1516 aa25.16■■□□□ 1.62
PRPF19-201ENST00000227524 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
PRPF19-201ENST00000227524 PHLDB1Q86UU1 1377 aa25.12■■□□□ 1.61
PRPF19-201ENST00000227524 CEP170Q5SW79 1584 aa25.12■■□□□ 1.61
PRPF19-201ENST00000227524 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
PRPF19-201ENST00000227524 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
PRPF19-201ENST00000227524 DISP1Q96F81 1524 aa25.06■■□□□ 1.6
PRPF19-201ENST00000227524 NUP160Q12769 1436 aa25.05■■□□□ 1.6
PRPF19-201ENST00000227524 KIAA0556O60303 1618 aa25.03■■□□□ 1.6
PRPF19-201ENST00000227524 FBLN2P98095 1184 aa25.01■■□□□ 1.59
PRPF19-201ENST00000227524 KCNH8Q96L42 1107 aa25■■□□□ 1.59
PRPF19-201ENST00000227524 FAM50AQ14320 339 aaKnown RBP24.99■■□□□ 1.59
PRPF19-201ENST00000227524 SIN3AQ96ST3 1273 aa24.96■■□□□ 1.59
PRPF19-201ENST00000227524 HECW1Q76N89 1606 aa24.93■■□□□ 1.58
PRPF19-201ENST00000227524 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
PRPF19-201ENST00000227524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.9■■□□□ 1.58
PRPF19-201ENST00000227524 MAGI3Q5TCQ9 1506 aa24.89■■□□□ 1.58
PRPF19-201ENST00000227524 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.58
PRPF19-201ENST00000227524 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
PRPF19-201ENST00000227524 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
PRPF19-201ENST00000227524 CHD1O14646 1710 aa24.87■■□□□ 1.57
PRPF19-201ENST00000227524 MTUS2Q5JR59 1369 aa24.87■■□□□ 1.57
PRPF19-201ENST00000227524 TSHZ2Q9NRE2 1034 aa24.87■■□□□ 1.57
PRPF19-201ENST00000227524 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
PRPF19-201ENST00000227524 JPH4Q96JJ6 628 aa24.86■■□□□ 1.57
PRPF19-201ENST00000227524 EHBP1L1Q8N3D4 1523 aa24.84■■□□□ 1.57
PRPF19-201ENST00000227524 CDK13Q14004 1512 aaKnown RBP24.84■■□□□ 1.57
PRPF19-201ENST00000227524 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
PRPF19-201ENST00000227524 NUP153P49790 1475 aaKnown RBP24.8■■□□□ 1.56
PRPF19-201ENST00000227524 NCOA2Q15596 1464 aa24.8■■□□□ 1.56
PRPF19-201ENST00000227524 SUPT6HQ7KZ85 1726 aaKnown RBP24.8■■□□□ 1.56
PRPF19-201ENST00000227524 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
PRPF19-201ENST00000227524 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
PRPF19-201ENST00000227524 CARMIL2Q6F5E8 1435 aa24.77■■□□□ 1.56
PRPF19-201ENST00000227524 PLB1Q6P1J6 1458 aa24.74■■□□□ 1.55
PRPF19-201ENST00000227524 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
PRPF19-201ENST00000227524 CCER2I3L3R5 266 aa24.73■■□□□ 1.55
PRPF19-201ENST00000227524 PTPN23Q9H3S7 1636 aa24.71■■□□□ 1.55
PRPF19-201ENST00000227524 MYOM3Q5VTT5 1437 aa24.71■■□□□ 1.55
PRPF19-201ENST00000227524 HIRIP3Q9BW71 556 aaPredicted RBP24.7■■□□□ 1.55
PRPF19-201ENST00000227524 FKBP8Q14318 412 aa24.69■■□□□ 1.54
PRPF19-201ENST00000227524 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
PRPF19-201ENST00000227524 TONSLQ96HA7 1378 aa24.68■■□□□ 1.54
PRPF19-201ENST00000227524 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
PRPF19-201ENST00000227524 BCANQ96GW7 911 aa24.67■■□□□ 1.54
PRPF19-201ENST00000227524 PRG4Q92954 1404 aaPredicted RBP24.67■■□□□ 1.54
PRPF19-201ENST00000227524 UACAQ9BZF9 1416 aa24.67■■□□□ 1.54
PRPF19-201ENST00000227524 ANP32CO43423 234 aa24.67■■□□□ 1.54
PRPF19-201ENST00000227524 PTPRKQ15262 1439 aa24.66■■□□□ 1.54
PRPF19-201ENST00000227524 ABCA8O94911 1581 aa24.65■■□□□ 1.54
PRPF19-201ENST00000227524 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
PRPF19-201ENST00000227524 NAIPQ13075 1403 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms