RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 RTN4Q9NQC3 1192 aaKnown RBP14.61□□□□□ -0.07
FOXN1-201ENST00000226247 IRX6P78412 446 aaPredicted RBP14.6□□□□□ -0.07
FOXN1-201ENST00000226247 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
FOXN1-201ENST00000226247 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.07
FOXN1-201ENST00000226247 MSH5O43196 834 aa14.58□□□□□ -0.08
FOXN1-201ENST00000226247 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
FOXN1-201ENST00000226247 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
FOXN1-201ENST00000226247 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
FOXN1-201ENST00000226247 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
FOXN1-201ENST00000226247 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.54□□□□□ -0.08
FOXN1-201ENST00000226247 CCNB3Q8WWL7 1395 aa14.53□□□□□ -0.08
FOXN1-201ENST00000226247 CFTRP13569 1480 aa14.53□□□□□ -0.08
FOXN1-201ENST00000226247 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.08
FOXN1-201ENST00000226247 ANP32CO43423 234 aa14.52□□□□□ -0.08
FOXN1-201ENST00000226247 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
FOXN1-201ENST00000226247 RAB3GAP2Q9H2M9 1393 aa14.51□□□□□ -0.09
FOXN1-201ENST00000226247 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
FOXN1-201ENST00000226247 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
FOXN1-201ENST00000226247 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
FOXN1-201ENST00000226247 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
FOXN1-201ENST00000226247 PPP1R15AO75807 674 aaPredicted RBP14.45□□□□□ -0.1
FOXN1-201ENST00000226247 HNRNPUQ00839 825 aaKnown RBP eCLIP14.44□□□□□ -0.1
FOXN1-201ENST00000226247 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
FOXN1-201ENST00000226247 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
FOXN1-201ENST00000226247 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
FOXN1-201ENST00000226247 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
FOXN1-201ENST00000226247 CUX2O14529 1486 aa14.38□□□□□ -0.11
FOXN1-201ENST00000226247 CUX1P39880 1505 aa14.37□□□□□ -0.11
FOXN1-201ENST00000226247 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
FOXN1-201ENST00000226247 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
FOXN1-201ENST00000226247 CCER2I3L3R5 266 aa14.35□□□□□ -0.11
FOXN1-201ENST00000226247 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
FOXN1-201ENST00000226247 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
FOXN1-201ENST00000226247 MAPKBP1O60336 1514 aa14.34□□□□□ -0.11
FOXN1-201ENST00000226247 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
FOXN1-201ENST00000226247 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
FOXN1-201ENST00000226247 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
FOXN1-201ENST00000226247 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
FOXN1-201ENST00000226247 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
FOXN1-201ENST00000226247 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
FOXN1-201ENST00000226247 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
FOXN1-201ENST00000226247 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
FOXN1-201ENST00000226247 ARHGAP35Q9NRY4 1499 aa14.29□□□□□ -0.12
FOXN1-201ENST00000226247 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
FOXN1-201ENST00000226247 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
FOXN1-201ENST00000226247 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
FOXN1-201ENST00000226247 B4GALNT3Q6L9W6 998 aa14.28□□□□□ -0.12
FOXN1-201ENST00000226247 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
FOXN1-201ENST00000226247 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
FOXN1-201ENST00000226247 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
FOXN1-201ENST00000226247 POLA1P09884 1462 aaPredicted RBP14.27□□□□□ -0.12
FOXN1-201ENST00000226247 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
FOXN1-201ENST00000226247 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
FOXN1-201ENST00000226247 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
FOXN1-201ENST00000226247 FANCIQ9NVI1 1328 aa14.24□□□□□ -0.13
FOXN1-201ENST00000226247 BIVM-ERCC5R4GMW8 1640 aa14.24□□□□□ -0.13
FOXN1-201ENST00000226247 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
FOXN1-201ENST00000226247 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
FOXN1-201ENST00000226247 CCDC184Q52MB2 194 aa14.22□□□□□ -0.13
FOXN1-201ENST00000226247 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.14
FOXN1-201ENST00000226247 TIMELESSQ9UNS1 1208 aa14.21□□□□□ -0.14
FOXN1-201ENST00000226247 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
FOXN1-201ENST00000226247 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
FOXN1-201ENST00000226247 NPM2Q86SE8 214 aaKnown RBP14.17□□□□□ -0.14
FOXN1-201ENST00000226247 IGF1RP08069 1367 aa14.17□□□□□ -0.14
FOXN1-201ENST00000226247 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
FOXN1-201ENST00000226247 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
FOXN1-201ENST00000226247 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
FOXN1-201ENST00000226247 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
FOXN1-201ENST00000226247 MRS2Q9HD23 443 aa14.15□□□□□ -0.14
FOXN1-201ENST00000226247 DNMBPQ6XZF7 1577 aa14.15□□□□□ -0.14
FOXN1-201ENST00000226247 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
FOXN1-201ENST00000226247 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
FOXN1-201ENST00000226247 RRP7BPQ9NSQ0 103 aa14.12□□□□□ -0.15
FOXN1-201ENST00000226247 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
FOXN1-201ENST00000226247 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
FOXN1-201ENST00000226247 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
FOXN1-201ENST00000226247 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
FOXN1-201ENST00000226247 FOXD1Q16676 465 aa14.08□□□□□ -0.16
FOXN1-201ENST00000226247 FHOD3Q2V2M9 1422 aa14.08□□□□□ -0.16
FOXN1-201ENST00000226247 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.16
FOXN1-201ENST00000226247 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
FOXN1-201ENST00000226247 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
FOXN1-201ENST00000226247 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
FOXN1-201ENST00000226247 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
FOXN1-201ENST00000226247 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
FOXN1-201ENST00000226247 ANP32AP39687 249 aaKnown RBP14.03□□□□□ -0.16
FOXN1-201ENST00000226247 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
FOXN1-201ENST00000226247 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.16
FOXN1-201ENST00000226247 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
FOXN1-201ENST00000226247 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
FOXN1-201ENST00000226247 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
FOXN1-201ENST00000226247 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
FOXN1-201ENST00000226247 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
FOXN1-201ENST00000226247 PTPRKQ15262 1439 aa13.99□□□□□ -0.17
FOXN1-201ENST00000226247 IFT140Q96RY7 1462 aa13.98□□□□□ -0.17
FOXN1-201ENST00000226247 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
FOXN1-201ENST00000226247 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
FOXN1-201ENST00000226247 NEFMP07197 916 aa13.97□□□□□ -0.17
FOXN1-201ENST00000226247 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms