RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
VTN-201ENST00000226218 ITGAEP38570 1179 aa22.07■■□□□ 1.12
VTN-201ENST00000226218 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
VTN-201ENST00000226218 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
VTN-201ENST00000226218 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
VTN-201ENST00000226218 IGF1RP08069 1367 aa22.01■■□□□ 1.11
VTN-201ENST00000226218 FKBP8Q14318 412 aa22.01■■□□□ 1.11
VTN-201ENST00000226218 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
VTN-201ENST00000226218 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
VTN-201ENST00000226218 BCANQ96GW7 911 aa21.98■■□□□ 1.11
VTN-201ENST00000226218 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
VTN-201ENST00000226218 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
VTN-201ENST00000226218 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
VTN-201ENST00000226218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.1
VTN-201ENST00000226218 CARMIL1Q5VZK9 1371 aa21.9■■□□□ 1.1
VTN-201ENST00000226218 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
VTN-201ENST00000226218 NEFLP07196 543 aa21.84■■□□□ 1.09
VTN-201ENST00000226218 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.08
VTN-201ENST00000226218 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
VTN-201ENST00000226218 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
VTN-201ENST00000226218 ANP32CO43423 234 aa21.81■■□□□ 1.08
VTN-201ENST00000226218 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.08
VTN-201ENST00000226218 BCL11AQ9H165 835 aa21.79■■□□□ 1.08
VTN-201ENST00000226218 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
VTN-201ENST00000226218 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
VTN-201ENST00000226218 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
VTN-201ENST00000226218 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
VTN-201ENST00000226218 KDM5BQ9UGL1 1544 aa21.74■■□□□ 1.07
VTN-201ENST00000226218 CCDC18Q5T9S5 1454 aa21.73■■□□□ 1.07
VTN-201ENST00000226218 PTPN23Q9H3S7 1636 aa21.72■■□□□ 1.07
VTN-201ENST00000226218 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
VTN-201ENST00000226218 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
VTN-201ENST00000226218 CTTNBP2Q8WZ74 1663 aa21.71■■□□□ 1.07
VTN-201ENST00000226218 UACAQ9BZF9 1416 aa21.7■■□□□ 1.07
VTN-201ENST00000226218 HFM1A2PYH4 1435 aa21.7■■□□□ 1.06
VTN-201ENST00000226218 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
VTN-201ENST00000226218 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
VTN-201ENST00000226218 MSH5O43196 834 aa21.67■■□□□ 1.06
VTN-201ENST00000226218 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
VTN-201ENST00000226218 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
VTN-201ENST00000226218 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
VTN-201ENST00000226218 LRRIQ1Q96JM4 1722 aa21.64■■□□□ 1.06
VTN-201ENST00000226218 CUL7Q14999 1698 aa21.63■■□□□ 1.05
VTN-201ENST00000226218 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
VTN-201ENST00000226218 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
VTN-201ENST00000226218 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
VTN-201ENST00000226218 NAIPQ13075 1403 aa21.6■■□□□ 1.05
VTN-201ENST00000226218 FMN1Q68DA7 1419 aa21.58■■□□□ 1.04
VTN-201ENST00000226218 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
VTN-201ENST00000226218 SAMD9Q5K651 1589 aa21.56■■□□□ 1.04
VTN-201ENST00000226218 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
VTN-201ENST00000226218 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
VTN-201ENST00000226218 GCC2Q8IWJ2 1684 aa21.53■■□□□ 1.04
VTN-201ENST00000226218 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
VTN-201ENST00000226218 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
VTN-201ENST00000226218 ERICH6BQ5W0A0 696 aa21.52■■□□□ 1.04
VTN-201ENST00000226218 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
VTN-201ENST00000226218 MYOM3Q5VTT5 1437 aa21.52■■□□□ 1.04
VTN-201ENST00000226218 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
VTN-201ENST00000226218 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
VTN-201ENST00000226218 DENND4BO75064 1496 aaPredicted RBP21.5■■□□□ 1.03
VTN-201ENST00000226218 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
VTN-201ENST00000226218 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
VTN-201ENST00000226218 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
VTN-201ENST00000226218 WASHC2AQ641Q2 1341 aa21.5■■□□□ 1.03
VTN-201ENST00000226218 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
VTN-201ENST00000226218 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
VTN-201ENST00000226218 EHBP1L1Q8N3D4 1523 aa21.48■■□□□ 1.03
VTN-201ENST00000226218 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
VTN-201ENST00000226218 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
VTN-201ENST00000226218 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
VTN-201ENST00000226218 CNTLNQ9NXG0 1405 aa21.45■■□□□ 1.02
VTN-201ENST00000226218 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
VTN-201ENST00000226218 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
VTN-201ENST00000226218 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
VTN-201ENST00000226218 IRX6P78412 446 aaPredicted RBP21.42■■□□□ 1.02
VTN-201ENST00000226218 AKNAQ7Z591 1439 aa21.41■■□□□ 1.02
VTN-201ENST00000226218 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
VTN-201ENST00000226218 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
VTN-201ENST00000226218 MAGI3Q5TCQ9 1506 aa21.38■■□□□ 1.01
VTN-201ENST00000226218 KDM6BO15054 1643 aa21.38■■□□□ 1.01
VTN-201ENST00000226218 NCOA1Q15788 1441 aa21.37■■□□□ 1.01
VTN-201ENST00000226218 CCDC184Q52MB2 194 aa21.36■■□□□ 1.01
VTN-201ENST00000226218 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
VTN-201ENST00000226218 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.01
VTN-201ENST00000226218 CCDC7Q96M83 1385 aa21.31■■□□□ 1
VTN-201ENST00000226218 PRKRIP1Q9H875 184 aaPredicted RBP21.31■■□□□ 1
VTN-201ENST00000226218 ZBED9Q6R2W3 1325 aa21.31■■□□□ 1
VTN-201ENST00000226218 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
VTN-201ENST00000226218 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
VTN-201ENST00000226218 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
VTN-201ENST00000226218 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
VTN-201ENST00000226218 RRP7BPQ9NSQ0 103 aa21.25■□□□□ 0.99
VTN-201ENST00000226218 TEX14Q8IWB6 1497 aa21.24■□□□□ 0.99
VTN-201ENST00000226218 SPATA31E1Q6ZUB1 1445 aa21.24■□□□□ 0.99
VTN-201ENST00000226218 L3MBTL2Q969R5 705 aa21.23■□□□□ 0.99
VTN-201ENST00000226218 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
VTN-201ENST00000226218 RPRD2Q5VT52 1461 aaKnown RBP21.22■□□□□ 0.99
VTN-201ENST00000226218 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
VTN-201ENST00000226218 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms