RNA–Protein interactions for RNA: ENST00000224756.12

CCSER2-201, Transcript of coiled-coil serine rich protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCSER2, Length 7,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-201ENST00000224756 CFAP54Q96N23 3096 aa5.48□□□□□ -1.53
CCSER2-201ENST00000224756 WRNQ14191 1432 aaPredicted RBP eCLIP5.47□□□□□ -1.53
CCSER2-201ENST00000224756 BAZ1BQ9UIG0 1483 aaKnown RBP5.47□□□□□ -1.53
CCSER2-201ENST00000224756 HNRNPUL2Q1KMD3 747 aaKnown RBP5.47□□□□□ -1.53
CCSER2-201ENST00000224756 SIN3AQ96ST3 1273 aa5.47□□□□□ -1.53
CCSER2-201ENST00000224756 DHX57Q6P158 1386 aaKnown RBP5.47□□□□□ -1.53
CCSER2-201ENST00000224756 PELP1Q8IZL8 1130 aaKnown RBP5.46□□□□□ -1.54
CCSER2-201ENST00000224756 SPENQ96T58 3664 aaKnown RBP5.46□□□□□ -1.54
CCSER2-201ENST00000224756 DNAH12Q6ZR08 3092 aa5.44□□□□□ -1.54
CCSER2-201ENST00000224756 WDR97A6NE52 1622 aa5.44□□□□□ -1.54
CCSER2-201ENST00000224756 TOP2BQ02880 1626 aa5.43□□□□□ -1.54
CCSER2-201ENST00000224756 SKAP1Q86WV1 359 aa5.43□□□□□ -1.54
CCSER2-201ENST00000224756 IGF1RP08069 1367 aa5.43□□□□□ -1.54
CCSER2-201ENST00000224756 P3H3Q8IVL6 736 aa5.43□□□□□ -1.54
CCSER2-201ENST00000224756 BIVM-ERCC5R4GMW8 1640 aa5.42□□□□□ -1.54
CCSER2-201ENST00000224756 CSRNP3Q8WYN3 585 aa5.41□□□□□ -1.54
CCSER2-201ENST00000224756 URB2Q14146 1524 aaKnown RBP5.41□□□□□ -1.54
CCSER2-201ENST00000224756 TNIKQ9UKE5 1360 aa5.4□□□□□ -1.54
CCSER2-201ENST00000224756 GTF3C3Q9Y5Q9 886 aa5.4□□□□□ -1.54
CCSER2-201ENST00000224756 FOXD1Q16676 465 aa5.4□□□□□ -1.54
CCSER2-201ENST00000224756 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.55
CCSER2-201ENST00000224756 ZNF608Q9ULD9 1512 aaPredicted RBP5.39□□□□□ -1.55
CCSER2-201ENST00000224756 YTHDC1Q96MU7 727 aaKnown RBP5.39□□□□□ -1.55
CCSER2-201ENST00000224756 APLP2Q06481 763 aa5.38□□□□□ -1.55
CCSER2-201ENST00000224756 PCF11O94913 1555 aaKnown RBP5.37□□□□□ -1.55
CCSER2-201ENST00000224756 ZNF644Q9H582 1327 aaPredicted RBP5.37□□□□□ -1.55
CCSER2-201ENST00000224756 MSH5O43196 834 aa5.37□□□□□ -1.55
CCSER2-201ENST00000224756 FHOD3Q2V2M9 1422 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 ARID3CA6NKF2 412 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 SNAPC4Q5SXM2 1469 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 ASPMQ8IZT6 3477 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 CFTRP13569 1480 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 CC2D2AQ9P2K1 1620 aa5.36□□□□□ -1.55
CCSER2-201ENST00000224756 ERCC6L2Q5T890 1561 aa5.35□□□□□ -1.55
CCSER2-201ENST00000224756 FGD5Q6ZNL6 1462 aa5.35□□□□□ -1.55
CCSER2-201ENST00000224756 CUX2O14529 1486 aa5.34□□□□□ -1.55
CCSER2-201ENST00000224756 HTTP42858 3142 aa5.34□□□□□ -1.56
CCSER2-201ENST00000224756 ACIN1Q9UKV3 1341 aaKnown RBP5.34□□□□□ -1.56
CCSER2-201ENST00000224756 VPS8Q8N3P4 1428 aa5.33□□□□□ -1.56
CCSER2-201ENST00000224756 TDRD9Q8NDG6 1382 aaKnown RBP5.33□□□□□ -1.56
CCSER2-201ENST00000224756 POLA1P09884 1462 aaPredicted RBP5.32□□□□□ -1.56
CCSER2-201ENST00000224756 PDS5BQ9NTI5 1447 aa5.32□□□□□ -1.56
CCSER2-201ENST00000224756 NCAPD3P42695 1498 aa5.31□□□□□ -1.56
CCSER2-201ENST00000224756 KIF21AQ7Z4S6 1674 aa5.31□□□□□ -1.56
CCSER2-201ENST00000224756 CDK13Q14004 1512 aaKnown RBP5.3□□□□□ -1.56
CCSER2-201ENST00000224756 ITGAEP38570 1179 aa5.3□□□□□ -1.56
CCSER2-201ENST00000224756 RRBP1Q9P2E9 1410 aaKnown RBP5.3□□□□□ -1.56
CCSER2-201ENST00000224756 NBPF8Q3BBV2 869 aa5.3□□□□□ -1.56
CCSER2-201ENST00000224756 BCORL1Q5H9F3 1711 aa5.3□□□□□ -1.56
CCSER2-201ENST00000224756 GOLGA3Q08378 1498 aa5.29□□□□□ -1.56
CCSER2-201ENST00000224756 RAB3GAP2Q9H2M9 1393 aa5.29□□□□□ -1.56
CCSER2-201ENST00000224756 DIEXFQ68CQ4 756 aaKnown RBP5.29□□□□□ -1.56
CCSER2-201ENST00000224756 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
CCSER2-201ENST00000224756 TARBP1Q13395 1621 aaKnown RBP5.28□□□□□ -1.56
CCSER2-201ENST00000224756 PPP1R15AO75807 674 aaPredicted RBP5.28□□□□□ -1.56
CCSER2-201ENST00000224756 SUPT6HQ7KZ85 1726 aaKnown RBP5.27□□□□□ -1.57
CCSER2-201ENST00000224756 SIGLEC1Q9BZZ2 1709 aa5.27□□□□□ -1.57
CCSER2-201ENST00000224756 UBTFP17480 764 aaKnown RBP5.26□□□□□ -1.57
CCSER2-201ENST00000224756 ARHGEF11O15085 1522 aa5.25□□□□□ -1.57
CCSER2-201ENST00000224756 TIAM1Q13009 1591 aa5.25□□□□□ -1.57
CCSER2-201ENST00000224756 CCER1Q8TC90 406 aaPredicted RBP5.25□□□□□ -1.57
CCSER2-201ENST00000224756 PRUNE2Q8WUY3 3088 aa5.25□□□□□ -1.57
CCSER2-201ENST00000224756 MYT1LQ9UL68 1186 aa5.25□□□□□ -1.57
CCSER2-201ENST00000224756 TOPBP1Q92547 1522 aa5.25□□□□□ -1.57
CCSER2-201ENST00000224756 IRX6P78412 446 aaPredicted RBP5.24□□□□□ -1.57
CCSER2-201ENST00000224756 TSHZ2Q9NRE2 1034 aa5.24□□□□□ -1.57
CCSER2-201ENST00000224756 SUPT16HQ9Y5B9 1047 aaKnown RBP5.24□□□□□ -1.57
CCSER2-201ENST00000224756 ABCA5Q8WWZ7 1642 aa5.24□□□□□ -1.57
CCSER2-201ENST00000224756 THOC2Q8NI27 1593 aaKnown RBP5.24□□□□□ -1.57
CCSER2-201ENST00000224756 LAMC3Q9Y6N6 1575 aa5.24□□□□□ -1.57
CCSER2-201ENST00000224756 DISP1Q96F81 1524 aa5.23□□□□□ -1.57
CCSER2-201ENST00000224756 LRRC9Q6ZRR7 1453 aa5.23□□□□□ -1.57
CCSER2-201ENST00000224756 KIF14Q15058 1648 aa5.23□□□□□ -1.57
CCSER2-201ENST00000224756 BPTFQ12830 3046 aa5.23□□□□□ -1.57
CCSER2-201ENST00000224756 ERICH6Q7L0X2 663 aa5.22□□□□□ -1.57
CCSER2-201ENST00000224756 CEP164Q9UPV0 1460 aa5.22□□□□□ -1.57
CCSER2-201ENST00000224756 ATP1B4Q9UN42 357 aaPredicted RBP5.21□□□□□ -1.57
CCSER2-201ENST00000224756 CFAP43Q8NDM7 1665 aa5.21□□□□□ -1.58
CCSER2-201ENST00000224756 HMGXB3Q12766 1538 aa5.21□□□□□ -1.58
CCSER2-201ENST00000224756 WASHC2AQ641Q2 1341 aa5.21□□□□□ -1.58
CCSER2-201ENST00000224756 GRIN2BQ13224 1484 aa5.21□□□□□ -1.58
CCSER2-201ENST00000224756 FANCD2Q9BXW9 1451 aa5.2□□□□□ -1.58
CCSER2-201ENST00000224756 SAMD9Q5K651 1589 aa5.2□□□□□ -1.58
CCSER2-201ENST00000224756 BCANQ96GW7 911 aa5.2□□□□□ -1.58
CCSER2-201ENST00000224756 NAIPQ13075 1403 aa5.2□□□□□ -1.58
CCSER2-201ENST00000224756 WDFY4Q6ZS81 3184 aa5.2□□□□□ -1.58
CCSER2-201ENST00000224756 ARHGEF12Q9NZN5 1544 aa5.19□□□□□ -1.58
CCSER2-201ENST00000224756 PLB1Q6P1J6 1458 aa5.19□□□□□ -1.58
CCSER2-201ENST00000224756 CADPSQ9ULU8 1353 aa5.19□□□□□ -1.58
CCSER2-201ENST00000224756 CEP170Q5SW79 1584 aa5.18□□□□□ -1.58
CCSER2-201ENST00000224756 PLA2R1Q13018 1463 aa5.18□□□□□ -1.58
CCSER2-201ENST00000224756 DMRT2Q9Y5R5 561 aa5.18□□□□□ -1.58
CCSER2-201ENST00000224756 ZNF316A6NFI3 1004 aaPredicted RBP5.17□□□□□ -1.58
CCSER2-201ENST00000224756 TRIM52Q96A61 297 aa5.17□□□□□ -1.58
CCSER2-201ENST00000224756 ERICH3Q5RHP9 1530 aa5.17□□□□□ -1.58
CCSER2-201ENST00000224756 CHIC2Q9UKJ5 165 aa5.17□□□□□ -1.58
CCSER2-201ENST00000224756 NUP153P49790 1475 aaKnown RBP5.17□□□□□ -1.58
CCSER2-201ENST00000224756 SPATA31E1Q6ZUB1 1445 aa5.17□□□□□ -1.58
CCSER2-201ENST00000224756 PTPN23Q9H3S7 1636 aa5.16□□□□□ -1.58
CCSER2-201ENST00000224756 PRG4Q92954 1404 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms