RNA–Protein interactions for RNA: ENST00000219596.5

MEFV-201, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MEFV, Length 3,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-201ENST00000219596 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
MEFV-201ENST00000219596 HNRNPUQ00839 825 aaKnown RBP eCLIP20.09■□□□□ 0.81
MEFV-201ENST00000219596 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
MEFV-201ENST00000219596 NESP48681 1621 aa20.03■□□□□ 0.8
MEFV-201ENST00000219596 CDK11AQ9UQ88 783 aaPredicted RBP20.03■□□□□ 0.8
MEFV-201ENST00000219596 MSH5O43196 834 aa20■□□□□ 0.79
MEFV-201ENST00000219596 NBR1Q14596 966 aa19.99■□□□□ 0.79
MEFV-201ENST00000219596 CUX2O14529 1486 aa19.98■□□□□ 0.79
MEFV-201ENST00000219596 FAM9BQ8IZU0 186 aa19.95■□□□□ 0.78
MEFV-201ENST00000219596 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.78
MEFV-201ENST00000219596 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
MEFV-201ENST00000219596 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
MEFV-201ENST00000219596 KIF21BO75037 1637 aa19.86■□□□□ 0.77
MEFV-201ENST00000219596 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
MEFV-201ENST00000219596 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
MEFV-201ENST00000219596 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
MEFV-201ENST00000219596 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
MEFV-201ENST00000219596 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
MEFV-201ENST00000219596 DEKP35659 375 aaKnown RBP19.78■□□□□ 0.76
MEFV-201ENST00000219596 ZNF326Q5BKZ1 582 aaKnown RBP19.78■□□□□ 0.76
MEFV-201ENST00000219596 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
MEFV-201ENST00000219596 FBLN2P98095 1184 aa19.77■□□□□ 0.76
MEFV-201ENST00000219596 NPM2Q86SE8 214 aaKnown RBP19.77■□□□□ 0.75
MEFV-201ENST00000219596 IGF1RP08069 1367 aa19.75■□□□□ 0.75
MEFV-201ENST00000219596 CUX1P39880 1505 aa19.74■□□□□ 0.75
MEFV-201ENST00000219596 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
MEFV-201ENST00000219596 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
MEFV-201ENST00000219596 CFTRP13569 1480 aa19.72■□□□□ 0.75
MEFV-201ENST00000219596 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
MEFV-201ENST00000219596 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
MEFV-201ENST00000219596 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
MEFV-201ENST00000219596 PRXQ9BXM0 1461 aa19.69■□□□□ 0.74
MEFV-201ENST00000219596 MTUS2Q5JR59 1369 aa19.69■□□□□ 0.74
MEFV-201ENST00000219596 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
MEFV-201ENST00000219596 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
MEFV-201ENST00000219596 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
MEFV-201ENST00000219596 FHOD3Q2V2M9 1422 aa19.67■□□□□ 0.74
MEFV-201ENST00000219596 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
MEFV-201ENST00000219596 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
MEFV-201ENST00000219596 LAMC3Q9Y6N6 1575 aa19.65■□□□□ 0.74
MEFV-201ENST00000219596 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
MEFV-201ENST00000219596 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
MEFV-201ENST00000219596 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
MEFV-201ENST00000219596 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
MEFV-201ENST00000219596 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
MEFV-201ENST00000219596 FOXD1Q16676 465 aa19.59■□□□□ 0.73
MEFV-201ENST00000219596 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
MEFV-201ENST00000219596 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
MEFV-201ENST00000219596 CCER2I3L3R5 266 aa19.58■□□□□ 0.73
MEFV-201ENST00000219596 RRBP1Q9P2E9 1410 aaKnown RBP19.58■□□□□ 0.72
MEFV-201ENST00000219596 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
MEFV-201ENST00000219596 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
MEFV-201ENST00000219596 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
MEFV-201ENST00000219596 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
MEFV-201ENST00000219596 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
MEFV-201ENST00000219596 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
MEFV-201ENST00000219596 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
MEFV-201ENST00000219596 PPP4R2Q9NY27 417 aa19.52■□□□□ 0.71
MEFV-201ENST00000219596 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.71
MEFV-201ENST00000219596 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
MEFV-201ENST00000219596 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
MEFV-201ENST00000219596 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
MEFV-201ENST00000219596 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
MEFV-201ENST00000219596 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
MEFV-201ENST00000219596 LAS1LQ9Y4W2 734 aaKnown RBP19.45■□□□□ 0.7
MEFV-201ENST00000219596 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
MEFV-201ENST00000219596 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
MEFV-201ENST00000219596 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
MEFV-201ENST00000219596 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
MEFV-201ENST00000219596 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
MEFV-201ENST00000219596 IL27Q8NEV9 243 aa19.39■□□□□ 0.7
MEFV-201ENST00000219596 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
MEFV-201ENST00000219596 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
MEFV-201ENST00000219596 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
MEFV-201ENST00000219596 EIF5BO60841 1220 aaKnown RBP19.33■□□□□ 0.69
MEFV-201ENST00000219596 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
MEFV-201ENST00000219596 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
MEFV-201ENST00000219596 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
MEFV-201ENST00000219596 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
MEFV-201ENST00000219596 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
MEFV-201ENST00000219596 MYT1LQ9UL68 1186 aa19.3■□□□□ 0.68
MEFV-201ENST00000219596 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
MEFV-201ENST00000219596 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
MEFV-201ENST00000219596 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
MEFV-201ENST00000219596 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
MEFV-201ENST00000219596 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
MEFV-201ENST00000219596 L3MBTL2Q969R5 705 aa19.27■□□□□ 0.68
MEFV-201ENST00000219596 PRDM2Q13029 1718 aa19.27■□□□□ 0.67
MEFV-201ENST00000219596 TIAM1Q13009 1591 aa19.24■□□□□ 0.67
MEFV-201ENST00000219596 NEFMP07197 916 aa19.24■□□□□ 0.67
MEFV-201ENST00000219596 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
MEFV-201ENST00000219596 WDR62O43379 1518 aa19.23■□□□□ 0.67
MEFV-201ENST00000219596 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
MEFV-201ENST00000219596 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
MEFV-201ENST00000219596 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
MEFV-201ENST00000219596 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
MEFV-201ENST00000219596 ARXQ96QS3 562 aa19.21■□□□□ 0.67
MEFV-201ENST00000219596 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
MEFV-201ENST00000219596 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
MEFV-201ENST00000219596 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms