RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
SRP54-201ENST00000216774 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
SRP54-201ENST00000216774 SETD5Q9C0A6 1442 aa19.31■□□□□ 0.68
SRP54-201ENST00000216774 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
SRP54-201ENST00000216774 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
SRP54-201ENST00000216774 EFCAB5A4FU69 1503 aa19.29■□□□□ 0.68
SRP54-201ENST00000216774 ITGAEP38570 1179 aa19.29■□□□□ 0.68
SRP54-201ENST00000216774 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
SRP54-201ENST00000216774 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
SRP54-201ENST00000216774 CUL7Q14999 1698 aa19.26■□□□□ 0.67
SRP54-201ENST00000216774 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.677e-11■■■■□ 23.2
SRP54-201ENST00000216774 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
SRP54-201ENST00000216774 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
SRP54-201ENST00000216774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
SRP54-201ENST00000216774 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
SRP54-201ENST00000216774 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
SRP54-201ENST00000216774 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
SRP54-201ENST00000216774 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
SRP54-201ENST00000216774 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
SRP54-201ENST00000216774 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
SRP54-201ENST00000216774 FMN1Q68DA7 1419 aa19.15■□□□□ 0.66
SRP54-201ENST00000216774 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
SRP54-201ENST00000216774 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
SRP54-201ENST00000216774 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
SRP54-201ENST00000216774 LAMC3Q9Y6N6 1575 aa19.09■□□□□ 0.65
SRP54-201ENST00000216774 NESP48681 1621 aa19.09■□□□□ 0.65
SRP54-201ENST00000216774 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.65
SRP54-201ENST00000216774 FGD6Q6ZV73 1430 aa19.07■□□□□ 0.64
SRP54-201ENST00000216774 MYT1Q01538 1121 aa19.06■□□□□ 0.64
SRP54-201ENST00000216774 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
SRP54-201ENST00000216774 ABCA5Q8WWZ7 1642 aa19.06■□□□□ 0.64
SRP54-201ENST00000216774 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
SRP54-201ENST00000216774 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
SRP54-201ENST00000216774 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
SRP54-201ENST00000216774 SUPT16HQ9Y5B9 1047 aaKnown RBP19.03■□□□□ 0.64
SRP54-201ENST00000216774 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
SRP54-201ENST00000216774 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
SRP54-201ENST00000216774 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
SRP54-201ENST00000216774 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
SRP54-201ENST00000216774 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
SRP54-201ENST00000216774 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
SRP54-201ENST00000216774 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
SRP54-201ENST00000216774 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
SRP54-201ENST00000216774 LRRIQ1Q96JM4 1722 aa18.95■□□□□ 0.62
SRP54-201ENST00000216774 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
SRP54-201ENST00000216774 MYOM3Q5VTT5 1437 aa18.94■□□□□ 0.62
SRP54-201ENST00000216774 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
SRP54-201ENST00000216774 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
SRP54-201ENST00000216774 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
SRP54-201ENST00000216774 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
SRP54-201ENST00000216774 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
SRP54-201ENST00000216774 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
SRP54-201ENST00000216774 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
SRP54-201ENST00000216774 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
SRP54-201ENST00000216774 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
SRP54-201ENST00000216774 NAIPQ13075 1403 aa18.89■□□□□ 0.61
SRP54-201ENST00000216774 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
SRP54-201ENST00000216774 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
SRP54-201ENST00000216774 CCER2I3L3R5 266 aa18.87■□□□□ 0.61
SRP54-201ENST00000216774 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
SRP54-201ENST00000216774 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.6
SRP54-201ENST00000216774 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
SRP54-201ENST00000216774 ANP32CO43423 234 aa18.81■□□□□ 0.6
SRP54-201ENST00000216774 MAGI3Q5TCQ9 1506 aa18.8■□□□□ 0.6
SRP54-201ENST00000216774 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
SRP54-201ENST00000216774 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
SRP54-201ENST00000216774 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
SRP54-201ENST00000216774 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
SRP54-201ENST00000216774 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
SRP54-201ENST00000216774 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
SRP54-201ENST00000216774 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
SRP54-201ENST00000216774 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
SRP54-201ENST00000216774 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
SRP54-201ENST00000216774 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
SRP54-201ENST00000216774 WDR62O43379 1518 aa18.7■□□□□ 0.58
SRP54-201ENST00000216774 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
SRP54-201ENST00000216774 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
SRP54-201ENST00000216774 FKBP8Q14318 412 aa18.66■□□□□ 0.58
SRP54-201ENST00000216774 CDK13Q14004 1512 aaKnown RBP18.64■□□□□ 0.58
SRP54-201ENST00000216774 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
SRP54-201ENST00000216774 NEFLP07196 543 aa18.64■□□□□ 0.57
SRP54-201ENST00000216774 KDM6BO15054 1643 aa18.63■□□□□ 0.57
SRP54-201ENST00000216774 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
SRP54-201ENST00000216774 CHIC2Q9UKJ5 165 aa18.62■□□□□ 0.57
SRP54-201ENST00000216774 ROCK1Q13464 1354 aa18.61■□□□□ 0.57
SRP54-201ENST00000216774 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
SRP54-201ENST00000216774 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
SRP54-201ENST00000216774 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
SRP54-201ENST00000216774 WASHC2AQ641Q2 1341 aa18.57■□□□□ 0.56
SRP54-201ENST00000216774 BCANQ96GW7 911 aa18.57■□□□□ 0.56
SRP54-201ENST00000216774 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
SRP54-201ENST00000216774 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
SRP54-201ENST00000216774 DAPK1P53355 1430 aa18.56■□□□□ 0.56
SRP54-201ENST00000216774 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.568e-7■■■■■ 28.7
SRP54-201ENST00000216774 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
SRP54-201ENST00000216774 DNMT1P26358 1616 aaKnown RBP18.56■□□□□ 0.56
SRP54-201ENST00000216774 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
SRP54-201ENST00000216774 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
SRP54-201ENST00000216774 ABCC5O15440 1437 aa18.52■□□□□ 0.56
SRP54-201ENST00000216774 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms