RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
SNAPC1-201ENST00000216294 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
SNAPC1-201ENST00000216294 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
SNAPC1-201ENST00000216294 ITGAEP38570 1179 aa23.39■■□□□ 1.33
SNAPC1-201ENST00000216294 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
SNAPC1-201ENST00000216294 CUL7Q14999 1698 aa23.3■■□□□ 1.32
SNAPC1-201ENST00000216294 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
SNAPC1-201ENST00000216294 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
SNAPC1-201ENST00000216294 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
SNAPC1-201ENST00000216294 DHX57Q6P158 1386 aaKnown RBP23.26■■□□□ 1.31
SNAPC1-201ENST00000216294 P3H3Q8IVL6 736 aa23.23■■□□□ 1.31
SNAPC1-201ENST00000216294 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNAPC1-201ENST00000216294 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
SNAPC1-201ENST00000216294 CTTNBP2Q8WZ74 1663 aa23.14■■□□□ 1.29
SNAPC1-201ENST00000216294 WDR62O43379 1518 aa23.12■■□□□ 1.29
SNAPC1-201ENST00000216294 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
SNAPC1-201ENST00000216294 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
SNAPC1-201ENST00000216294 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
SNAPC1-201ENST00000216294 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
SNAPC1-201ENST00000216294 EFCAB5A4FU69 1503 aa23.07■■□□□ 1.28
SNAPC1-201ENST00000216294 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
SNAPC1-201ENST00000216294 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
SNAPC1-201ENST00000216294 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
SNAPC1-201ENST00000216294 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
SNAPC1-201ENST00000216294 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
SNAPC1-201ENST00000216294 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
SNAPC1-201ENST00000216294 ADAMTS12P58397 1594 aa23■■□□□ 1.27
SNAPC1-201ENST00000216294 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
SNAPC1-201ENST00000216294 MAP3K1Q13233 1512 aa22.99■■□□□ 1.27
SNAPC1-201ENST00000216294 RRBP1Q9P2E9 1410 aaKnown RBP22.98■■□□□ 1.27
SNAPC1-201ENST00000216294 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
SNAPC1-201ENST00000216294 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
SNAPC1-201ENST00000216294 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
SNAPC1-201ENST00000216294 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
SNAPC1-201ENST00000216294 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
SNAPC1-201ENST00000216294 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
SNAPC1-201ENST00000216294 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
SNAPC1-201ENST00000216294 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
SNAPC1-201ENST00000216294 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
SNAPC1-201ENST00000216294 FAM50AQ14320 339 aaKnown RBP22.92■■□□□ 1.26
SNAPC1-201ENST00000216294 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
SNAPC1-201ENST00000216294 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
SNAPC1-201ENST00000216294 SUPT16HQ9Y5B9 1047 aaKnown RBP22.91■■□□□ 1.26
SNAPC1-201ENST00000216294 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
SNAPC1-201ENST00000216294 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.26
SNAPC1-201ENST00000216294 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
SNAPC1-201ENST00000216294 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
SNAPC1-201ENST00000216294 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
SNAPC1-201ENST00000216294 MAPKBP1O60336 1514 aa22.81■■□□□ 1.24
SNAPC1-201ENST00000216294 BCANQ96GW7 911 aa22.79■■□□□ 1.24
SNAPC1-201ENST00000216294 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
SNAPC1-201ENST00000216294 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
SNAPC1-201ENST00000216294 MTUS2Q5JR59 1369 aa22.72■■□□□ 1.23
SNAPC1-201ENST00000216294 MAGI1Q96QZ7 1491 aaPredicted RBP22.72■■□□□ 1.23
SNAPC1-201ENST00000216294 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
SNAPC1-201ENST00000216294 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
SNAPC1-201ENST00000216294 FBLN2P98095 1184 aa22.71■■□□□ 1.23
SNAPC1-201ENST00000216294 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.23
SNAPC1-201ENST00000216294 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
SNAPC1-201ENST00000216294 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
SNAPC1-201ENST00000216294 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
SNAPC1-201ENST00000216294 ARID3CA6NKF2 412 aa22.64■■□□□ 1.21
SNAPC1-201ENST00000216294 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
SNAPC1-201ENST00000216294 KIAA0556O60303 1618 aa22.62■■□□□ 1.21
SNAPC1-201ENST00000216294 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
SNAPC1-201ENST00000216294 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
SNAPC1-201ENST00000216294 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
SNAPC1-201ENST00000216294 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
SNAPC1-201ENST00000216294 CCDC18Q5T9S5 1454 aa22.6■■□□□ 1.21
SNAPC1-201ENST00000216294 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
SNAPC1-201ENST00000216294 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
SNAPC1-201ENST00000216294 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
SNAPC1-201ENST00000216294 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
SNAPC1-201ENST00000216294 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.21
SNAPC1-201ENST00000216294 FKBP8Q14318 412 aa22.56■■□□□ 1.2
SNAPC1-201ENST00000216294 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
SNAPC1-201ENST00000216294 NUP160Q12769 1436 aa22.54■■□□□ 1.2
SNAPC1-201ENST00000216294 MYOM3Q5VTT5 1437 aa22.52■■□□□ 1.2
SNAPC1-201ENST00000216294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.2
SNAPC1-201ENST00000216294 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
SNAPC1-201ENST00000216294 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
SNAPC1-201ENST00000216294 JPH4Q96JJ6 628 aa22.48■■□□□ 1.19
SNAPC1-201ENST00000216294 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
SNAPC1-201ENST00000216294 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
SNAPC1-201ENST00000216294 PTPRKQ15262 1439 aa22.44■■□□□ 1.18
SNAPC1-201ENST00000216294 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
SNAPC1-201ENST00000216294 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
SNAPC1-201ENST00000216294 PTPN23Q9H3S7 1636 aa22.41■■□□□ 1.18
SNAPC1-201ENST00000216294 MYT1Q01538 1121 aa22.4■■□□□ 1.18
SNAPC1-201ENST00000216294 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
SNAPC1-201ENST00000216294 ANP32CO43423 234 aa22.36■■□□□ 1.17
SNAPC1-201ENST00000216294 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
SNAPC1-201ENST00000216294 RRP7BPQ9NSQ0 103 aa22.35■■□□□ 1.17
SNAPC1-201ENST00000216294 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.17
SNAPC1-201ENST00000216294 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
SNAPC1-201ENST00000216294 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
SNAPC1-201ENST00000216294 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
SNAPC1-201ENST00000216294 CHD1O14646 1710 aa22.31■■□□□ 1.16
SNAPC1-201ENST00000216294 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
SNAPC1-201ENST00000216294 MIA2Q96PC5 1412 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms