RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
PCDHB4-201ENST00000194152 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
PCDHB4-201ENST00000194152 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
PCDHB4-201ENST00000194152 IGF1RP08069 1367 aa18.34■□□□□ 0.53
PCDHB4-201ENST00000194152 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
PCDHB4-201ENST00000194152 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
PCDHB4-201ENST00000194152 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
PCDHB4-201ENST00000194152 CUX1P39880 1505 aa18.28■□□□□ 0.52
PCDHB4-201ENST00000194152 SUPT16HQ9Y5B9 1047 aaKnown RBP18.28■□□□□ 0.52
PCDHB4-201ENST00000194152 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
PCDHB4-201ENST00000194152 FOXD1Q16676 465 aa18.27■□□□□ 0.52
PCDHB4-201ENST00000194152 NEFLP07196 543 aa18.27■□□□□ 0.51
PCDHB4-201ENST00000194152 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
PCDHB4-201ENST00000194152 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
PCDHB4-201ENST00000194152 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
PCDHB4-201ENST00000194152 CFTRP13569 1480 aa18.22■□□□□ 0.51
PCDHB4-201ENST00000194152 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
PCDHB4-201ENST00000194152 KIF21BO75037 1637 aa18.2■□□□□ 0.5
PCDHB4-201ENST00000194152 ERCC6Q03468 1493 aa18.19■□□□□ 0.5
PCDHB4-201ENST00000194152 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
PCDHB4-201ENST00000194152 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
PCDHB4-201ENST00000194152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHB4-201ENST00000194152 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
PCDHB4-201ENST00000194152 RAB3GAP2Q9H2M9 1393 aa18.14■□□□□ 0.5
PCDHB4-201ENST00000194152 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCDHB4-201ENST00000194152 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
PCDHB4-201ENST00000194152 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
PCDHB4-201ENST00000194152 FKBP8Q14318 412 aa18.1■□□□□ 0.49
PCDHB4-201ENST00000194152 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
PCDHB4-201ENST00000194152 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
PCDHB4-201ENST00000194152 PRXQ9BXM0 1461 aa18.08■□□□□ 0.48
PCDHB4-201ENST00000194152 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.48
PCDHB4-201ENST00000194152 ANP32CO43423 234 aa18.06■□□□□ 0.48
PCDHB4-201ENST00000194152 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
PCDHB4-201ENST00000194152 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
PCDHB4-201ENST00000194152 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
PCDHB4-201ENST00000194152 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
PCDHB4-201ENST00000194152 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
PCDHB4-201ENST00000194152 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
PCDHB4-201ENST00000194152 HMGXB3Q12766 1538 aa18.01■□□□□ 0.47
PCDHB4-201ENST00000194152 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
PCDHB4-201ENST00000194152 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
PCDHB4-201ENST00000194152 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
PCDHB4-201ENST00000194152 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
PCDHB4-201ENST00000194152 TOPBP1Q92547 1522 aa17.96■□□□□ 0.46
PCDHB4-201ENST00000194152 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
PCDHB4-201ENST00000194152 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
PCDHB4-201ENST00000194152 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
PCDHB4-201ENST00000194152 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHB4-201ENST00000194152 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
PCDHB4-201ENST00000194152 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
PCDHB4-201ENST00000194152 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
PCDHB4-201ENST00000194152 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
PCDHB4-201ENST00000194152 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCDHB4-201ENST00000194152 NBR1Q14596 966 aa17.84■□□□□ 0.45
PCDHB4-201ENST00000194152 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
PCDHB4-201ENST00000194152 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
PCDHB4-201ENST00000194152 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
PCDHB4-201ENST00000194152 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
PCDHB4-201ENST00000194152 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
PCDHB4-201ENST00000194152 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
PCDHB4-201ENST00000194152 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHB4-201ENST00000194152 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
PCDHB4-201ENST00000194152 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
PCDHB4-201ENST00000194152 PKD2Q13563 968 aa17.75■□□□□ 0.43
PCDHB4-201ENST00000194152 RTN4Q9NQC3 1192 aaKnown RBP17.75■□□□□ 0.43
PCDHB4-201ENST00000194152 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
PCDHB4-201ENST00000194152 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
PCDHB4-201ENST00000194152 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
PCDHB4-201ENST00000194152 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
PCDHB4-201ENST00000194152 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
PCDHB4-201ENST00000194152 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
PCDHB4-201ENST00000194152 DCAF11Q8TEB1 546 aa17.7■□□□□ 0.42
PCDHB4-201ENST00000194152 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
PCDHB4-201ENST00000194152 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
PCDHB4-201ENST00000194152 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
PCDHB4-201ENST00000194152 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
PCDHB4-201ENST00000194152 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
PCDHB4-201ENST00000194152 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
PCDHB4-201ENST00000194152 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.63■□□□□ 0.41
PCDHB4-201ENST00000194152 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
PCDHB4-201ENST00000194152 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
PCDHB4-201ENST00000194152 NPM1P06748 294 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDHB4-201ENST00000194152 NUP155O75694 1391 aa17.61■□□□□ 0.41
PCDHB4-201ENST00000194152 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
PCDHB4-201ENST00000194152 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
PCDHB4-201ENST00000194152 MSH5O43196 834 aa17.59■□□□□ 0.41
PCDHB4-201ENST00000194152 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
PCDHB4-201ENST00000194152 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
PCDHB4-201ENST00000194152 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms