RNA–Protein interactions for RNA: ENST00000164139.3

PYGM-201, Transcript of glycogen phosphorylase, muscle associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGM, Length 3,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGM-201ENST00000164139 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
PYGM-201ENST00000164139 P3H3Q8IVL6 736 aa18.26■□□□□ 0.51
PYGM-201ENST00000164139 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
PYGM-201ENST00000164139 IGF1RP08069 1367 aa18.25■□□□□ 0.51
PYGM-201ENST00000164139 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
PYGM-201ENST00000164139 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
PYGM-201ENST00000164139 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
PYGM-201ENST00000164139 NEFLP07196 543 aa18.23■□□□□ 0.51
PYGM-201ENST00000164139 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
PYGM-201ENST00000164139 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
PYGM-201ENST00000164139 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
PYGM-201ENST00000164139 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.51
PYGM-201ENST00000164139 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
PYGM-201ENST00000164139 PHLDB1Q86UU1 1377 aa18.19■□□□□ 0.5
PYGM-201ENST00000164139 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
PYGM-201ENST00000164139 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
PYGM-201ENST00000164139 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.5
PYGM-201ENST00000164139 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
PYGM-201ENST00000164139 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
PYGM-201ENST00000164139 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
PYGM-201ENST00000164139 TRIM52Q96A61 297 aa18.12■□□□□ 0.49
PYGM-201ENST00000164139 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
PYGM-201ENST00000164139 NESP48681 1621 aa18.11■□□□□ 0.49
PYGM-201ENST00000164139 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
PYGM-201ENST00000164139 PRKCSHP14314 528 aaPredicted RBP18.1■□□□□ 0.49
PYGM-201ENST00000164139 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
PYGM-201ENST00000164139 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
PYGM-201ENST00000164139 MSH5O43196 834 aa18.05■□□□□ 0.48
PYGM-201ENST00000164139 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
PYGM-201ENST00000164139 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
PYGM-201ENST00000164139 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
PYGM-201ENST00000164139 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
PYGM-201ENST00000164139 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
PYGM-201ENST00000164139 ANP32CO43423 234 aa18.01■□□□□ 0.47
PYGM-201ENST00000164139 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
PYGM-201ENST00000164139 CFAP43Q8NDM7 1665 aa18■□□□□ 0.47
PYGM-201ENST00000164139 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
PYGM-201ENST00000164139 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
PYGM-201ENST00000164139 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
PYGM-201ENST00000164139 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
PYGM-201ENST00000164139 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
PYGM-201ENST00000164139 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
PYGM-201ENST00000164139 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
PYGM-201ENST00000164139 FYCO1Q9BQS8 1478 aa17.93■□□□□ 0.46
PYGM-201ENST00000164139 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
PYGM-201ENST00000164139 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
PYGM-201ENST00000164139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
PYGM-201ENST00000164139 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
PYGM-201ENST00000164139 NBR1Q14596 966 aa17.88■□□□□ 0.45
PYGM-201ENST00000164139 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
PYGM-201ENST00000164139 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
PYGM-201ENST00000164139 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
PYGM-201ENST00000164139 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
PYGM-201ENST00000164139 CUL7Q14999 1698 aa17.87■□□□□ 0.45
PYGM-201ENST00000164139 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
PYGM-201ENST00000164139 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
PYGM-201ENST00000164139 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
PYGM-201ENST00000164139 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.45
PYGM-201ENST00000164139 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
PYGM-201ENST00000164139 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
PYGM-201ENST00000164139 UACAQ9BZF9 1416 aa17.82■□□□□ 0.44
PYGM-201ENST00000164139 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
PYGM-201ENST00000164139 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
PYGM-201ENST00000164139 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
PYGM-201ENST00000164139 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
PYGM-201ENST00000164139 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
PYGM-201ENST00000164139 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
PYGM-201ENST00000164139 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.44
PYGM-201ENST00000164139 HNRNPUQ00839 825 aaKnown RBP eCLIP17.77■□□□□ 0.44
PYGM-201ENST00000164139 NAIPQ13075 1403 aa17.77■□□□□ 0.43
PYGM-201ENST00000164139 NCOA2Q15596 1464 aa17.75■□□□□ 0.43
PYGM-201ENST00000164139 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
PYGM-201ENST00000164139 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
PYGM-201ENST00000164139 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
PYGM-201ENST00000164139 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
PYGM-201ENST00000164139 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
PYGM-201ENST00000164139 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.42
PYGM-201ENST00000164139 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
PYGM-201ENST00000164139 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
PYGM-201ENST00000164139 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
PYGM-201ENST00000164139 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
PYGM-201ENST00000164139 GAPVD1Q14C86 1478 aa17.67■□□□□ 0.42
PYGM-201ENST00000164139 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
PYGM-201ENST00000164139 WDR62O43379 1518 aa17.66■□□□□ 0.42
PYGM-201ENST00000164139 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
PYGM-201ENST00000164139 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
PYGM-201ENST00000164139 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
PYGM-201ENST00000164139 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
PYGM-201ENST00000164139 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.41
PYGM-201ENST00000164139 B4GALNT3Q6L9W6 998 aa17.64■□□□□ 0.41
PYGM-201ENST00000164139 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
PYGM-201ENST00000164139 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
PYGM-201ENST00000164139 FOXD1Q16676 465 aa17.61■□□□□ 0.41
PYGM-201ENST00000164139 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
PYGM-201ENST00000164139 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
PYGM-201ENST00000164139 MPHOSPH9Q99550 1183 aa17.59■□□□□ 0.41
PYGM-201ENST00000164139 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
PYGM-201ENST00000164139 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
PYGM-201ENST00000164139 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
PYGM-201ENST00000164139 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms