RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 P3h3Q8CG70 732 aa22.97■■□□□ 1.27
Shroom3-211ENSMUST00000225438 Dcaf1Q80TR8 1506 aa22.97■■□□□ 1.27
Shroom3-211ENSMUST00000225438 Wdr43Q6ZQL4 677 aaKnown RBP22.93■■□□□ 1.26
Shroom3-211ENSMUST00000225438 Aplp2Q06335 707 aa22.91■■□□□ 1.26
Shroom3-211ENSMUST00000225438 DekQ7TNV0 380 aaKnown RBP22.89■■□□□ 1.25
Shroom3-211ENSMUST00000225438 Trim26Q99PN3 545 aa22.86■■□□□ 1.25
Shroom3-211ENSMUST00000225438 Rgl3Q3UYI5 709 aa22.83■■□□□ 1.24
Shroom3-211ENSMUST00000225438 Setd5Q5XJV7 1441 aa22.82■■□□□ 1.24
Shroom3-211ENSMUST00000225438 Vsig10D3YX43 558 aa22.79■■□□□ 1.24
Shroom3-211ENSMUST00000225438 IqubQ8CDK3 788 aa22.76■■□□□ 1.23
Shroom3-211ENSMUST00000225438 Rb1cc1Q9ESK9 1588 aa22.75■■□□□ 1.23
Shroom3-211ENSMUST00000225438 Irx6Q9ER75 438 aa22.73■■□□□ 1.23
Shroom3-211ENSMUST00000225438 Ythdc1E9Q5K9 736 aaKnown RBP22.72■■□□□ 1.23
Shroom3-211ENSMUST00000225438 Hsp90ab1P11499 724 aaKnown RBP22.7■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Trim30dE9PWL0 497 aa22.69■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Lmod3E9QA62 571 aa22.67■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Kdm2aP59997 1161 aa22.67■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Srpk2O54781 681 aaKnown RBP22.65■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Trim44Q9QXA7 346 aa22.65■■□□□ 1.22
Shroom3-211ENSMUST00000225438 CanxP35564 591 aaKnown RBP22.65■■□□□ 1.22
Shroom3-211ENSMUST00000225438 Znf326O88291 580 aa22.64■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Ofd1Q80Z25 1017 aa22.62■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Exosc9Q9JHI7 438 aaKnown RBP22.6■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Mroh3A0A1D5RM54 893 aa22.6■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Grwd1Q810D6 446 aaKnown RBP22.6■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Ccdc9Q8VC31 543 aaKnown RBP22.58■■□□□ 1.21
Shroom3-211ENSMUST00000225438 Kif15Q6P9L6 1387 aa22.57■■□□□ 1.2
Shroom3-211ENSMUST00000225438 Gm20521D3Z5F7 333 aa22.56■■□□□ 1.2
Shroom3-211ENSMUST00000225438 Rsf1E9PWW9 1441 aaKnown RBP22.56■■□□□ 1.2
Shroom3-211ENSMUST00000225438 Card11Q8CIS0 1159 aa22.55■■□□□ 1.2
Shroom3-211ENSMUST00000225438 Arhgap27A2AB59 869 aa22.54■■□□□ 1.2
Shroom3-211ENSMUST00000225438 Mapk8ip3Q9ESN9 1337 aa22.54■■□□□ 1.2
Shroom3-211ENSMUST00000225438 PtmaP26350 111 aa22.5■■□□□ 1.19
Shroom3-211ENSMUST00000225438 Arid4bA2CG63 1314 aaKnown RBP22.5■■□□□ 1.19
Shroom3-211ENSMUST00000225438 Cwc22Q8C5N3 908 aaKnown RBP22.49■■□□□ 1.19
Shroom3-211ENSMUST00000225438 Apbb1Q9QXJ1 710 aa22.48■■□□□ 1.19
Shroom3-211ENSMUST00000225438 Neurod2Q62414 383 aa22.45■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Eea1Q8BL66 1411 aa22.45■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Rrp7aQ9D1C9 280 aaKnown RBP22.45■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Ccdc18Q640L5 1455 aa22.44■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Chmp4bQ9D8B3 224 aaKnown RBP22.42■■□□□ 1.18
Shroom3-211ENSMUST00000225438 NgefQ8CHT1 710 aa22.41■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Iqcf3Q9D498 203 aa22.41■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Plcb2A3KGF7 1181 aa22.41■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Zfp777B9EKF4 885 aa22.4■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Stag3O70576 1240 aa22.4■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Mtus2Q3UHD3 1353 aa22.4■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Rtn4Q99P72 1162 aaKnown RBP22.39■■□□□ 1.18
Shroom3-211ENSMUST00000225438 Htatsf1Q8BGC0 757 aa22.39■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Gm6268A2A3U9 297 aa22.38■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Stk24Q99KH8 431 aa22.38■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Golga3P55937 1487 aa22.38■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Ercc6F8VPZ5 1481 aa22.36■■□□□ 1.17
Shroom3-211ENSMUST00000225438 MyclP10166 368 aa22.36■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Aebp2Q9Z248 504 aaKnown RBP22.36■■□□□ 1.17
Shroom3-211ENSMUST00000225438 NudcO35685 332 aaKnown RBP22.35■■□□□ 1.17
Shroom3-211ENSMUST00000225438 PnnO35691 725 aaKnown RBP22.34■■□□□ 1.17
Shroom3-211ENSMUST00000225438 Map7O88735 730 aa22.33■■□□□ 1.17
Shroom3-211ENSMUST00000225438 NacadQ5SWP3 1504 aa22.33■■□□□ 1.16
Shroom3-211ENSMUST00000225438 Pes1Q9EQ61 584 aaKnown RBP22.31■■□□□ 1.16
Shroom3-211ENSMUST00000225438 Ppm1gQ61074 542 aa22.3■■□□□ 1.16
Shroom3-211ENSMUST00000225438 1700019A02RikA0A087WPV9 146 aa22.29■■□□□ 1.16
Shroom3-211ENSMUST00000225438 Clstn1Q9EPL2 979 aa22.24■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Mia2Q91ZV0 1396 aa22.22■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Casc1Q6TDU8 730 aa22.21■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Dbr1Q923B1 550 aa22.21■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Armcx1Q9CX83 456 aa22.21■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Hsp90b1P08113 802 aaKnown RBP22.21■■□□□ 1.15
Shroom3-211ENSMUST00000225438 Cnga1P29974 684 aa22.2■■□□□ 1.14
Shroom3-211ENSMUST00000225438 Fam71e1A1L3C1 212 aa22.2■■□□□ 1.14
Shroom3-211ENSMUST00000225438 Ccdc27Q3V036 639 aa22.17■■□□□ 1.14
Shroom3-211ENSMUST00000225438 KnstrnQ9D9Z1 312 aaKnown RBP22.14■■□□□ 1.13
Shroom3-211ENSMUST00000225438 MccE9PWI3 1003 aa22.11■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Baz1aO88379 1555 aa22.11■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Sh3bp5Q9Z131 463 aa22.11■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Mbd3Q9Z2D8 285 aaKnown RBP22.11■■□□□ 1.13
Shroom3-211ENSMUST00000225438 B4galnt3Q6L8S8 986 aa22.1■■□□□ 1.13
Shroom3-211ENSMUST00000225438 HnrnpuQ8VEK3 800 aaKnown RBP22.09■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Rwdd1Q9CQK7 243 aa22.09■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Eif4g2Q62448 906 aaKnown RBP22.09■■□□□ 1.13
Shroom3-211ENSMUST00000225438 Adam1bQ8R534 806 aa22.07■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Rtf1A2AQ19 715 aaKnown RBP22.06■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Ppp1r18Q8BQ30 594 aa22.05■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Map4P27546 1125 aaKnown RBP22.05■■□□□ 1.12
Shroom3-211ENSMUST00000225438 1700123L14RikQ3V2K7 440 aa22.04■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Fhad1A6PWD2 1420 aa22.03■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Wwc2Q6NXJ0 1187 aa22.03■■□□□ 1.12
Shroom3-211ENSMUST00000225438 Hspa5P20029 655 aaKnown RBP22.01■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Spryd3E9Q9B3 442 aa22■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Kif27Q7M6Z4 1394 aa21.99■■□□□ 1.11
Shroom3-211ENSMUST00000225438 U2surpQ6NV83 1029 aaKnown RBP21.98■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Rundc1Q0VDN7 615 aa21.98■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Sart3Q9JLI8 962 aaKnown RBP21.98■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Rassf8Q8CJ96 419 aa21.98■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Gtf2e1Q9D0D5 440 aa21.97■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Pkd2O35245 966 aa21.96■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Anapc15P60007 132 aa21.96■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Speer4f1Q9D5Q6 258 aa21.95■■□□□ 1.11
Shroom3-211ENSMUST00000225438 Stk26Q99JT2 416 aa21.95■■□□□ 1.1
Shroom3-211ENSMUST00000225438 Ifit1bl1D3Z6F0 470 aa21.93■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms