RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 PtmaP26350 111 aa13.18□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Mrs2Q5NCE8 434 aa13.18□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Npm1Q61937 292 aaKnown RBP13.18□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Tnnt2P50752 301 aa13.17□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Erich6D3Z6S9 713 aa13.16□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Zbtb7cQ8VCZ7 619 aa13.15□□□□□ -0.3
Col6a5-203ENSMUST00000190193 AU015836B2RUM3 263 aa13.12□□□□□ -0.31
Col6a5-203ENSMUST00000190193 Gm13697A2AK42 830 aa13.11□□□□□ -0.31
Col6a5-203ENSMUST00000190193 Mbd3Q9Z2D8 285 aaKnown RBP13.1□□□□□ -0.31
Col6a5-203ENSMUST00000190193 BlmO88700 1416 aa13.1□□□□□ -0.31
Col6a5-203ENSMUST00000190193 Zbtb4Q5F293 982 aa13.1□□□□□ -0.31
Col6a5-203ENSMUST00000190193 Rad21Q61550 635 aaKnown RBP13.08□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Chic1Q8CBW7 227 aa13.08□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Atp1b4Q99ME6 356 aa13.07□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Map7O88735 730 aa13.07□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Ofd1Q80Z25 1017 aa13.06□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Vsig10D3YX43 558 aa13.04□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Clstn2Q9ER65 966 aa13.03□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Chmp4bQ9D8B3 224 aaKnown RBP13.03□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Plcb2A3KGF7 1181 aa13.02□□□□□ -0.32
Col6a5-203ENSMUST00000190193 Eea1Q8BL66 1411 aa13.02□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Fgd1P52734 960 aa13.01□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Mia2Q91ZV0 1396 aa13.01□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Cwc22Q8C5N3 908 aaKnown RBP13□□□□□ -0.33
Col6a5-203ENSMUST00000190193 4933402E13RikQ9D4D2 429 aa13□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Calcoco2A2A6M5 331 aa12.99□□□□□ -0.33
Col6a5-203ENSMUST00000190193 PtmsQ9D0J8 101 aaKnown RBP12.99□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Prdm10Q3UTQ7 1184 aa12.98□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Golga3P55937 1487 aa12.98□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Setd5Q5XJV7 1441 aa12.97□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Gm13695A2AK44 830 aa12.97□□□□□ -0.33
Col6a5-203ENSMUST00000190193 Tcerg1Q8CGF7 1100 aaKnown RBP12.95□□□□□ -0.34
Col6a5-203ENSMUST00000190193 NacadQ5SWP3 1504 aa12.95□□□□□ -0.34
Col6a5-203ENSMUST00000190193 Aebp2Q9Z248 504 aaKnown RBP12.94□□□□□ -0.34
Col6a5-203ENSMUST00000190193 Casc1Q6TDU8 730 aa12.93□□□□□ -0.34
Col6a5-203ENSMUST00000190193 MsnP26041 577 aaKnown RBP12.93□□□□□ -0.34
Col6a5-203ENSMUST00000190193 Ipo9Q91YE6 1041 aa12.93□□□□□ -0.34
Col6a5-203ENSMUST00000190193 Dnttip2Q8R2M2 758 aaKnown RBP12.92□□□□□ -0.34
Col6a5-203ENSMUST00000190193 KnstrnQ9D9Z1 312 aaKnown RBP12.91□□□□□ -0.34
Col6a5-203ENSMUST00000190193 Gm973E9Q295 1059 aa12.9□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Ccdc18Q640L5 1455 aa12.89□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Erich6bQ9D4S6 220 aa12.89□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Rrp12Q6P5B0 1295 aaKnown RBP12.89□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Dnai1Q8C0M8 701 aa12.88□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Rangap1P46061 589 aaKnown RBP12.87□□□□□ -0.35
Col6a5-203ENSMUST00000190193 PnnO35691 725 aaKnown RBP12.86□□□□□ -0.35
Col6a5-203ENSMUST00000190193 P3h3Q8CG70 732 aa12.85□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Arid4bA2CG63 1314 aaKnown RBP12.85□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Map7d2A2AG50 781 aa12.84□□□□□ -0.35
Col6a5-203ENSMUST00000190193 MccE9PWI3 1003 aa12.84□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Chic2Q9D9G3 165 aa12.84□□□□□ -0.35
Col6a5-203ENSMUST00000190193 Fhad1A6PWD2 1420 aa12.83□□□□□ -0.36
Col6a5-203ENSMUST00000190193 SetQ9EQU5 289 aaKnown RBP12.82□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Cald1E9QA15 768 aaKnown RBP12.82□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Mak16Q8BGS0 296 aaKnown RBP12.82□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Rgl3Q3UYI5 709 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Gtf3c3Q3TMP1 882 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Trim26Q99PN3 545 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Ddrgk1Q80WW9 315 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Rwdd1Q9CQK7 243 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 EspnQ9ET47 871 aa12.81□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Znf316Q6PGE4 1016 aa12.8□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Mapk8ip3Q9ESN9 1337 aa12.8□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Wwc2Q6NXJ0 1187 aa12.8□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Card11Q8CIS0 1159 aa12.8□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Supt16hQ920B9 1047 aa12.8□□□□□ -0.36
Col6a5-203ENSMUST00000190193 RdxP26043 583 aaKnown RBP12.79□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Znf326O88291 580 aa12.79□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Mtus2Q3UHD3 1353 aa12.77□□□□□ -0.36
Col6a5-203ENSMUST00000190193 Zfp777B9EKF4 885 aa12.77□□□□□ -0.36
Col6a5-203ENSMUST00000190193 SafbD3YXK2 937 aaKnown RBP12.76□□□□□ -0.37
Col6a5-203ENSMUST00000190193 NudcO35685 332 aaKnown RBP12.75□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Arhgap35Q91YM2 1499 aa12.75□□□□□ -0.37
Col6a5-203ENSMUST00000190193 IqubQ8CDK3 788 aa12.74□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Chmp5Q9D7S9 219 aa12.74□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Becn1O88597 448 aa12.74□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Pknox2Q8BG99 474 aa12.73□□□□□ -0.37
Col6a5-203ENSMUST00000190193 VgfQ0VGU4 617 aa12.73□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Spryd3E9Q9B3 442 aa12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Cttnbp2B9EJA2 1648 aa12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Rsf1E9PWW9 1441 aaKnown RBP12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Cc2d2aQ8CFW7 1633 aa12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 B4galnt3Q6L8S8 986 aa12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 HnrnpuQ8VEK3 800 aaKnown RBP12.72□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Ush1cQ9ES64 910 aa12.71□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Apbb1Q9QXJ1 710 aa12.71□□□□□ -0.37
Col6a5-203ENSMUST00000190193 Iqcf3Q9D498 203 aa12.7□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Ipo8Q7TMY7 1010 aa12.69□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Exosc9Q9JHI7 438 aaKnown RBP12.69□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Ercc6F8VPZ5 1481 aa12.68□□□□□ -0.38
Col6a5-203ENSMUST00000190193 CntlnA2AM05 1397 aa12.68□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Pde3bQ61409 1100 aa12.68□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Fyco1Q8VDC1 1437 aa12.68□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Kdm5dQ62240 1548 aa12.67□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Smarce1O54941 411 aaKnown RBP12.67□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Ifnlr1Q8CGK5 535 aa12.67□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Baz1bQ9Z277 1479 aa12.67□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Pes1Q9EQ61 584 aaKnown RBP12.67□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Fmn1Q05860 1466 aa12.66□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Dbr1Q923B1 550 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms