RNA–Protein interactions for RNA: ENSMUST00000188447.1

Gm28948-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28948, Length 2,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28948-201ENSMUST00000188447 Upf2A2AT37 1269 aaKnown RBP11.47□□□□□ -0.57
Gm28948-201ENSMUST00000188447 Ccdc27Q3V036 639 aa11.46□□□□□ -0.57
Gm28948-201ENSMUST00000188447 Kdm5bQ80Y84 1544 aa11.45□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Top2aQ01320 1528 aaKnown RBP11.44□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Clip1Q922J3 1391 aa11.44□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Washc2Q6PGL7 1334 aa11.43□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Wdr43Q6ZQL4 677 aaKnown RBP11.43□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Cc2d2aQ8CFW7 1633 aa11.42□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Cecr2E9Q2Z1 1453 aa11.41□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Ppp4r2Q0VGB7 417 aa11.41□□□□□ -0.58
Gm28948-201ENSMUST00000188447 NrdcQ8BHG1 1161 aa11.41□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Hs6st3Q9QYK4 470 aa11.41□□□□□ -0.58
Gm28948-201ENSMUST00000188447 Fmn1Q05860 1466 aa11.4□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Fgd1P52734 960 aa11.4□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Gtf3c3Q3TMP1 882 aa11.4□□□□□ -0.59
Gm28948-201ENSMUST00000188447 CftrP26361 1476 aa11.39□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Esf1Q3V1V3 845 aaKnown RBP11.39□□□□□ -0.59
Gm28948-201ENSMUST00000188447 TchhA0A0B4J1F9 1599 aa11.38□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Myt1lP97500 1187 aa11.38□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Akt1s1Q9D1F4 257 aa11.38□□□□□ -0.59
Gm28948-201ENSMUST00000188447 UacaQ8CGB3 1411 aa11.37□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Eif4g1Q6NZJ6 1600 aaKnown RBP11.37□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Plekhg3Q4VAC9 1341 aa11.37□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Cttnbp2B9EJA2 1648 aa11.37□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Irx3P81067 507 aa11.36□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Baz1bQ9Z277 1479 aa11.34□□□□□ -0.59
Gm28948-201ENSMUST00000188447 Gm13697A2AK42 830 aa11.33□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Eid3Q3V124 375 aa11.33□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Ttbk1Q6PCN3 1308 aa11.32□□□□□ -0.6
Gm28948-201ENSMUST00000188447 NclP09405 707 aaKnown RBP11.31□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Ccdc18Q640L5 1455 aa11.31□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Hsp90aa1P07901 733 aaKnown RBP11.31□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Smg6P61406 1418 aaKnown RBP11.29□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Pknox2Q8BG99 474 aa11.29□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Eea1Q8BL66 1411 aa11.29□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Camsap2Q8C1B1 1461 aa11.27□□□□□ -0.6
Gm28948-201ENSMUST00000188447 Ipo9Q91YE6 1041 aa11.27□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Npm2Q80W85 207 aa11.26□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Liat1Q810M6 228 aa11.26□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Pak3Q61036 559 aa11.25□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Ankrd36D3Z4K0 1415 aa11.25□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Thoc2B1AZI6 1594 aaKnown RBP11.23□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Arhgef5E9Q7D5 1581 aa11.23□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Plcd4Q8K3R3 807 aa11.23□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Egfem1Q8C088 590 aa11.22□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Pds5bQ4VA53 1446 aaKnown RBP11.22□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Il27Q8K3I6 234 aa11.21□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Arap1Q4LDD4 1452 aa11.21□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Ncoa2Q61026 1462 aa11.21□□□□□ -0.61
Gm28948-201ENSMUST00000188447 Ipo4Q8VI75 1082 aa11.21□□□□□ -0.62
Gm28948-201ENSMUST00000188447 Ccer2J3QPU5 274 aa11.2□□□□□ -0.62
Gm28948-201ENSMUST00000188447 Tiam1Q60610 1591 aa11.17□□□□□ -0.62
Gm28948-201ENSMUST00000188447 Smarca4Q3TKT4 1613 aaKnown RBP11.15□□□□□ -0.62
Gm28948-201ENSMUST00000188447 Eif5bQ05D44 1216 aaKnown RBP11.14□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Tcerg1Q8CGF7 1100 aaKnown RBP11.14□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Slc24a1Q91WD8 1130 aa11.14□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Slc34a2Q9DBP0 697 aa11.14□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Arhgap35Q91YM2 1499 aa11.14□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Bach1P97302 739 aa11.13□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Fyco1Q8VDC1 1437 aa11.13□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Fhad1A6PWD2 1420 aa11.11□□□□□ -0.63
Gm28948-201ENSMUST00000188447 4933416C03RikQ3V063 378 aa11.11□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Iqcf3Q9D498 203 aa11.1□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Mia2Q91ZV0 1396 aa11.1□□□□□ -0.63
Gm28948-201ENSMUST00000188447 Setd5Q5XJV7 1441 aa11.1□□□□□ -0.63
Gm28948-201ENSMUST00000188447 NrkQ9R0G8 1455 aa11.08□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Map3k1P53349 1493 aa11.07□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Pprc1Q6NZN1 1644 aa11.07□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Vps8Q0P5W1 1427 aa11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Erich3F6QRE9 1637 aa11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Atad2bE9Q166 1460 aaKnown RBP11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Gm13695A2AK44 830 aa11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Hspa5P20029 655 aaKnown RBP11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Mrs2Q5NCE8 434 aa11.06□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Naip1Q9QWK5 1403 aa11.05□□□□□ -0.64
Gm28948-201ENSMUST00000188447 DaxxO35613 739 aa11.04□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Fam50aQ9WV03 339 aaKnown RBP11.03□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Naip5Q9R016 1403 aa11.03□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Crocc2F6XLV1 1638 aa11.03□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Dhx29Q6PGC1 1365 aaKnown RBP11.03□□□□□ -0.64
Gm28948-201ENSMUST00000188447 BlmO88700 1416 aa11.03□□□□□ -0.64
Gm28948-201ENSMUST00000188447 Cul7Q8VE73 1689 aa11.02□□□□□ -0.65
Gm28948-201ENSMUST00000188447 NeflP08551 543 aa11.02□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Sin3aQ60520 1274 aaKnown RBP11.02□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Pdcl3Q8BVF2 240 aa11.02□□□□□ -0.65
Gm28948-201ENSMUST00000188447 TnnQ80Z71 1560 aa11.01□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Slc4a2P13808 1237 aaKnown RBP11.01□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Mink1Q9JM52 1308 aa11.01□□□□□ -0.65
Gm28948-201ENSMUST00000188447 EprsQ8CGC7 1512 aaKnown RBP10.99□□□□□ -0.65
Gm28948-201ENSMUST00000188447 P3h3Q8CG70 732 aa10.99□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Slc4a3P16283 1227 aa10.99□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Efcab5A0JP43 1406 aa10.98□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Ncoa1P70365 1447 aa10.97□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Slx4Q6P1D7 1565 aa10.97□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Ercc6F8VPZ5 1481 aa10.97□□□□□ -0.65
Gm28948-201ENSMUST00000188447 PnisrA2AJT4 805 aaKnown RBP10.96□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Gtf2a1Q99PM3 378 aa10.96□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Kcnn1Q9EQR3 537 aa10.96□□□□□ -0.65
Gm28948-201ENSMUST00000188447 Pcf11G3X9Z4 1553 aa10.94□□□□□ -0.66
Gm28948-201ENSMUST00000188447 Fhod3Q76LL6 1578 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms