RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Rb1cc1Q9ESK9 1588 aa24.32■■□□□ 1.48
Sptbn4-207ENSMUST00000172269 Rangap1P46061 589 aaKnown RBP24.31■■□□□ 1.48
Sptbn4-207ENSMUST00000172269 Chmp4bQ9D8B3 224 aaKnown RBP24.31■■□□□ 1.48
Sptbn4-207ENSMUST00000172269 Vsig10D3YX43 558 aa24.3■■□□□ 1.48
Sptbn4-207ENSMUST00000172269 CanxP35564 591 aaKnown RBP24.26■■□□□ 1.47
Sptbn4-207ENSMUST00000172269 Trim30dE9PWL0 497 aa24.26■■□□□ 1.47
Sptbn4-207ENSMUST00000172269 Rad21Q61550 635 aaKnown RBP24.26■■□□□ 1.47
Sptbn4-207ENSMUST00000172269 Zfp777B9EKF4 885 aa24.22■■□□□ 1.47
Sptbn4-207ENSMUST00000172269 Mapk8ip2Q9ERE9 830 aa24.22■■□□□ 1.47
Sptbn4-207ENSMUST00000172269 Calcoco2A2A6M5 331 aa24.19■■□□□ 1.46
Sptbn4-207ENSMUST00000172269 Abcc8B2RUS7 1588 aa24.18■■□□□ 1.46
Sptbn4-207ENSMUST00000172269 Map7O88735 730 aa24.17■■□□□ 1.46
Sptbn4-207ENSMUST00000172269 Eid3Q3V124 375 aa24.15■■□□□ 1.46
Sptbn4-207ENSMUST00000172269 Safb2Q80YR5 991 aaKnown RBP24.14■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Ccdc27Q3V036 639 aa24.14■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Casc1Q6TDU8 730 aa24.13■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Ppm1gQ61074 542 aa24.13■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Mrs2Q5NCE8 434 aa24.12■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Gm973E9Q295 1059 aa24.12■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Tnnt2P50752 301 aa24.1■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 Plcb2A3KGF7 1181 aa24.09■■□□□ 1.45
Sptbn4-207ENSMUST00000172269 PtmsQ9D0J8 101 aaKnown RBP24.03■■□□□ 1.44
Sptbn4-207ENSMUST00000172269 Mak16Q8BGS0 296 aaKnown RBP24.02■■□□□ 1.44
Sptbn4-207ENSMUST00000172269 IqubQ8CDK3 788 aa24.01■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 Pes1Q9EQ61 584 aaKnown RBP24■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 Wwc2Q6NXJ0 1187 aa24■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 Gm38655A0A286YDK6 273 aa23.99■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 SetQ9EQU5 289 aaKnown RBP23.99■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 Fkbp15Q6P9Q6 1216 aaKnown RBP23.96■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 MccE9PWI3 1003 aa23.96■■□□□ 1.43
Sptbn4-207ENSMUST00000172269 Trim26Q99PN3 545 aa23.95■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 Iqcf3Q9D498 203 aa23.95■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 Sall2Q9QX96 1004 aa23.94■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 Plppr3Q7TPB0 716 aa23.94■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 P3h3Q8CG70 732 aa23.9■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 Mbd3Q9Z2D8 285 aaKnown RBP23.89■■□□□ 1.42
Sptbn4-207ENSMUST00000172269 BlmO88700 1416 aa23.89■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Eif4g2Q62448 906 aaKnown RBP23.88■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Mapk8ip3Q9ESN9 1337 aa23.87■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Gm6268A2A3U9 297 aa23.87■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 KnstrnQ9D9Z1 312 aaKnown RBP23.87■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Pde3bQ61409 1100 aa23.85■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Ofd1Q80Z25 1017 aa23.85■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 AU015836B2RUM3 263 aa23.85■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Dnai2A2AC93 623 aa23.84■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Cwc22Q8C5N3 908 aaKnown RBP23.83■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 NudcO35685 332 aaKnown RBP23.83■■□□□ 1.41
Sptbn4-207ENSMUST00000172269 Znf316Q6PGE4 1016 aa23.82■■□□□ 1.4
Sptbn4-207ENSMUST00000172269 Exosc9Q9JHI7 438 aaKnown RBP23.82■■□□□ 1.4
Sptbn4-207ENSMUST00000172269 Arid4bA2CG63 1314 aaKnown RBP23.78■■□□□ 1.4
Sptbn4-207ENSMUST00000172269 MsnP26041 577 aaKnown RBP23.77■■□□□ 1.4
Sptbn4-207ENSMUST00000172269 Cald1E9QA15 768 aaKnown RBP23.76■■□□□ 1.39
Sptbn4-207ENSMUST00000172269 Tpm3-rs7D3Z2H9 248 aa23.76■■□□□ 1.39
Sptbn4-207ENSMUST00000172269 Chic2Q9D9G3 165 aa23.72■■□□□ 1.39
Sptbn4-207ENSMUST00000172269 Sh3bp5Q9Z131 463 aa23.71■■□□□ 1.39
Sptbn4-207ENSMUST00000172269 Irx3P81067 507 aa23.71■■□□□ 1.39
Sptbn4-207ENSMUST00000172269 HnrnpuQ8VEK3 800 aaKnown RBP23.69■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Irx6Q9ER75 438 aa23.69■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Srpk2O54781 681 aaKnown RBP23.69■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Erich6bQ9D4S6 220 aa23.69■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 RdxP26043 583 aaKnown RBP23.68■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Clstn1Q9EPL2 979 aa23.68■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Hsp90b1P08113 802 aaKnown RBP23.64■■□□□ 1.38
Sptbn4-207ENSMUST00000172269 Rgl3Q3UYI5 709 aa23.63■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 Map7d2A2AG50 781 aa23.63■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 Anapc15P60007 132 aa23.63■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 Fam71e1A1L3C1 212 aa23.63■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 Setd5Q5XJV7 1441 aa23.6■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 R3hcc1Q8BSI6 488 aa23.59■■□□□ 1.37
Sptbn4-207ENSMUST00000172269 Mroh3A0A1D5RM54 893 aa23.57■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Mia2Q91ZV0 1396 aa23.56■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Ccdc18Q640L5 1455 aa23.56■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Eea1Q8BL66 1411 aa23.56■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Ubl4bQ9CQ84 188 aa23.56■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Pcmtd1P59913 357 aa23.55■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Card11Q8CIS0 1159 aa23.55■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Dnttip2Q8R2M2 758 aaKnown RBP23.54■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Rtn4Q99P72 1162 aaKnown RBP23.53■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Baz1aO88379 1555 aa23.53■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Noc3lQ8VI84 807 aaKnown RBP23.52■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Smarce1O54941 411 aaKnown RBP23.52■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Sart3Q9JLI8 962 aaKnown RBP23.52■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Gm20521D3Z5F7 333 aa23.52■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 4933402E13RikQ9D4D2 429 aa23.52■■□□□ 1.36
Sptbn4-207ENSMUST00000172269 Rwdd1Q9CQK7 243 aa23.49■■□□□ 1.35
Sptbn4-207ENSMUST00000172269 Kdm2aP59997 1161 aa23.49■■□□□ 1.35
Sptbn4-207ENSMUST00000172269 Rassf8Q8CJ96 419 aa23.49■■□□□ 1.35
Sptbn4-207ENSMUST00000172269 Ftsj3Q9DBE9 838 aaKnown RBP23.48■■□□□ 1.35
Sptbn4-207ENSMUST00000172269 Rrp12Q6P5B0 1295 aaKnown RBP23.48■■□□□ 1.35
Sptbn4-207ENSMUST00000172269 Apbb1Q9QXJ1 710 aa23.43■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Nol10Q5RJG1 687 aaKnown RBP23.42■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Fhad1A6PWD2 1420 aa23.42■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Stag3O70576 1240 aa23.41■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Neurod2Q62414 383 aa23.41■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Tpm3P21107 285 aaKnown RBP23.41■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Iffo2Q8R2V2 512 aa23.4■■□□□ 1.34
Sptbn4-207ENSMUST00000172269 Rtf1A2AQ19 715 aaKnown RBP23.39■■□□□ 1.33
Sptbn4-207ENSMUST00000172269 NacadQ5SWP3 1504 aa23.39■■□□□ 1.33
Sptbn4-207ENSMUST00000172269 Tcerg1Q8CGF7 1100 aaKnown RBP23.37■■□□□ 1.33
Sptbn4-207ENSMUST00000172269 Cspp1B2RX88 1205 aa23.36■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms