RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Golga3P55937 1487 aa24.5■■□□□ 1.51
Pkp4-210ENSMUST00000168631 Clstn2Q9ER65 966 aa24.41■■□□□ 1.5
Pkp4-210ENSMUST00000168631 Rsf1E9PWW9 1441 aaKnown RBP24.4■■□□□ 1.5
Pkp4-210ENSMUST00000168631 Aplp2Q06335 707 aa24.37■■□□□ 1.49
Pkp4-210ENSMUST00000168631 Grwd1Q810D6 446 aaKnown RBP24.37■■□□□ 1.49
Pkp4-210ENSMUST00000168631 Baz1aO88379 1555 aa24.36■■□□□ 1.49
Pkp4-210ENSMUST00000168631 P3h3Q8CG70 732 aa24.33■■□□□ 1.49
Pkp4-210ENSMUST00000168631 Wdr43Q6ZQL4 677 aaKnown RBP24.3■■□□□ 1.48
Pkp4-210ENSMUST00000168631 Kdm2aP59997 1161 aa24.29■■□□□ 1.48
Pkp4-210ENSMUST00000168631 Arhgap27A2AB59 869 aa24.28■■□□□ 1.48
Pkp4-210ENSMUST00000168631 Eea1Q8BL66 1411 aa24.28■■□□□ 1.48
Pkp4-210ENSMUST00000168631 Trim26Q99PN3 545 aa24.25■■□□□ 1.47
Pkp4-210ENSMUST00000168631 Upf2A2AT37 1269 aaKnown RBP24.22■■□□□ 1.47
Pkp4-210ENSMUST00000168631 Safb2Q80YR5 991 aaKnown RBP24.18■■□□□ 1.46
Pkp4-210ENSMUST00000168631 Ofd1Q80Z25 1017 aa24.12■■□□□ 1.45
Pkp4-210ENSMUST00000168631 Mroh3A0A1D5RM54 893 aa24.12■■□□□ 1.45
Pkp4-210ENSMUST00000168631 Rrp7aQ9D1C9 280 aaKnown RBP24.1■■□□□ 1.45
Pkp4-210ENSMUST00000168631 Ccdc18Q640L5 1455 aa24.08■■□□□ 1.45
Pkp4-210ENSMUST00000168631 Hspa5P20029 655 aaKnown RBP24.08■■□□□ 1.45
Pkp4-210ENSMUST00000168631 1700123L14RikQ3V2K7 440 aa24.07■■□□□ 1.44
Pkp4-210ENSMUST00000168631 Card11Q8CIS0 1159 aa24.07■■□□□ 1.44
Pkp4-210ENSMUST00000168631 Kdm5dQ62240 1548 aa24.05■■□□□ 1.44
Pkp4-210ENSMUST00000168631 Ccdc88bQ4QRL3 1481 aa24.05■■□□□ 1.44
Pkp4-210ENSMUST00000168631 Apbb1Q9QXJ1 710 aa24.04■■□□□ 1.44
Pkp4-210ENSMUST00000168631 DiexfQ8BTT6 772 aaKnown RBP24.02■■□□□ 1.44
Pkp4-210ENSMUST00000168631 Irx6Q9ER75 438 aa24■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Gm20521D3Z5F7 333 aa23.96■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Srpk2O54781 681 aaKnown RBP23.96■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Neurod2Q62414 383 aa23.96■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Ercc6F8VPZ5 1481 aa23.95■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Trim30dE9PWL0 497 aa23.95■■□□□ 1.43
Pkp4-210ENSMUST00000168631 Wwc2Q6NXJ0 1187 aa23.94■■□□□ 1.42
Pkp4-210ENSMUST00000168631 Fgd1P52734 960 aa23.94■■□□□ 1.42
Pkp4-210ENSMUST00000168631 Stk24Q99KH8 431 aa23.93■■□□□ 1.42
Pkp4-210ENSMUST00000168631 Mtus2Q3UHD3 1353 aa23.93■■□□□ 1.42
Pkp4-210ENSMUST00000168631 Vsig10D3YX43 558 aa23.92■■□□□ 1.42
Pkp4-210ENSMUST00000168631 Exosc9Q9JHI7 438 aaKnown RBP23.89■■□□□ 1.41
Pkp4-210ENSMUST00000168631 Fam71e1A1L3C1 212 aa23.88■■□□□ 1.41
Pkp4-210ENSMUST00000168631 CanxP35564 591 aaKnown RBP23.88■■□□□ 1.41
Pkp4-210ENSMUST00000168631 IqubQ8CDK3 788 aa23.88■■□□□ 1.41
Pkp4-210ENSMUST00000168631 SafbD3YXK2 937 aaKnown RBP23.85■■□□□ 1.41
Pkp4-210ENSMUST00000168631 Cwc22Q8C5N3 908 aaKnown RBP23.85■■□□□ 1.41
Pkp4-210ENSMUST00000168631 Sin3aQ60520 1274 aaKnown RBP23.85■■□□□ 1.41
Pkp4-210ENSMUST00000168631 Arid4bA2CG63 1314 aaKnown RBP23.83■■□□□ 1.4
Pkp4-210ENSMUST00000168631 Cnga1P29974 684 aa23.81■■□□□ 1.4
Pkp4-210ENSMUST00000168631 DekQ7TNV0 380 aaKnown RBP23.81■■□□□ 1.4
Pkp4-210ENSMUST00000168631 Cep162Q6ZQ06 1403 aa23.81■■□□□ 1.4
Pkp4-210ENSMUST00000168631 Pkd2O35245 966 aa23.79■■□□□ 1.4
Pkp4-210ENSMUST00000168631 Aebp1Q640N1 1128 aa23.79■■□□□ 1.4
Pkp4-210ENSMUST00000168631 NgefQ8CHT1 710 aa23.77■■□□□ 1.4
Pkp4-210ENSMUST00000168631 Hsp90ab1P11499 724 aaKnown RBP23.76■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Arid3cA6PWV5 409 aa23.76■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Kif27Q7M6Z4 1394 aa23.75■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Mia2Q91ZV0 1396 aa23.75■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Map4P27546 1125 aaKnown RBP23.74■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Cabp1Q9JLK7 227 aa23.74■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Dbr1Q923B1 550 aa23.72■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Stag3O70576 1240 aa23.71■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Slc4a3P16283 1227 aa23.71■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Ecm2Q5FW85 670 aa23.71■■□□□ 1.39
Pkp4-210ENSMUST00000168631 Trak1Q6PD31 939 aa23.7■■□□□ 1.38
Pkp4-210ENSMUST00000168631 Gm6268A2A3U9 297 aa23.69■■□□□ 1.38
Pkp4-210ENSMUST00000168631 1700019A02RikA0A087WPV9 146 aa23.69■■□□□ 1.38
Pkp4-210ENSMUST00000168631 Rundc1Q0VDN7 615 aa23.67■■□□□ 1.38
Pkp4-210ENSMUST00000168631 Mapk8ip3Q9ESN9 1337 aa23.66■■□□□ 1.38
Pkp4-210ENSMUST00000168631 Armcx1Q9CX83 456 aa23.65■■□□□ 1.38
Pkp4-210ENSMUST00000168631 Ythdc1E9Q5K9 736 aaKnown RBP23.62■■□□□ 1.37
Pkp4-210ENSMUST00000168631 B4galnt3Q6L8S8 986 aa23.62■■□□□ 1.37
Pkp4-210ENSMUST00000168631 MyclP10166 368 aa23.61■■□□□ 1.37
Pkp4-210ENSMUST00000168631 Ifit1bl1D3Z6F0 470 aa23.59■■□□□ 1.37
Pkp4-210ENSMUST00000168631 Hsp90aa1P07901 733 aaKnown RBP23.59■■□□□ 1.37
Pkp4-210ENSMUST00000168631 Fmn1Q05860 1466 aa23.58■■□□□ 1.37
Pkp4-210ENSMUST00000168631 Pds5bQ4VA53 1446 aaKnown RBP23.58■■□□□ 1.37
Pkp4-210ENSMUST00000168631 Exoc6Q8R313 802 aa23.58■■□□□ 1.36
Pkp4-210ENSMUST00000168631 Mphosph9A6H5Y1 991 aa23.56■■□□□ 1.36
Pkp4-210ENSMUST00000168631 AknaQ80VW7 1404 aa23.54■■□□□ 1.36
Pkp4-210ENSMUST00000168631 Stk26Q99JT2 416 aa23.53■■□□□ 1.36
Pkp4-210ENSMUST00000168631 Rtn4Q99P72 1162 aaKnown RBP23.53■■□□□ 1.36
Pkp4-210ENSMUST00000168631 Rpap1Q80TE0 1409 aa23.53■■□□□ 1.36
Pkp4-210ENSMUST00000168631 Cecr2E9Q2Z1 1453 aa23.52■■□□□ 1.35
Pkp4-210ENSMUST00000168631 Plin1Q8CGN5 517 aa23.51■■□□□ 1.35
Pkp4-210ENSMUST00000168631 CftrP26361 1476 aa23.46■■□□□ 1.35
Pkp4-210ENSMUST00000168631 Cux2P70298 1426 aa23.45■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Ppp1r18Q8BQ30 594 aa23.45■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Plcb2A3KGF7 1181 aa23.44■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Speer4f1Q9D5Q6 258 aa23.43■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Baz1bQ9Z277 1479 aa23.42■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Fyco1Q8VDC1 1437 aa23.42■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Rwdd1Q9CQK7 243 aa23.41■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Lmod3E9QA62 571 aa23.41■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Gtf2e1Q9D0D5 440 aa23.41■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Lemd3Q9WU40 921 aa23.4■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Trim44Q9QXA7 346 aa23.4■■□□□ 1.34
Pkp4-210ENSMUST00000168631 Zscan21Q07231 555 aa23.39■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Spryd3E9Q9B3 442 aa23.37■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Sycp2Q9CUU3 1500 aa23.37■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Rapgef2Q8CHG7 1496 aa23.36■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Chmp5Q9D7S9 219 aa23.36■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Ppm1gQ61074 542 aa23.35■■□□□ 1.33
Pkp4-210ENSMUST00000168631 Supt16hQ920B9 1047 aa23.35■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms