RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Golga3P55937 1487 aa24,5■■□□□ 1,51
Pkp4-210ENSMUST00000168631 Clstn2Q9ER65 966 aa24,41■■□□□ 1,5
Pkp4-210ENSMUST00000168631 Rsf1E9PWW9 1441 aaKnown RBP24,4■■□□□ 1,5
Pkp4-210ENSMUST00000168631 Aplp2Q06335 707 aa24,37■■□□□ 1,49
Pkp4-210ENSMUST00000168631 Grwd1Q810D6 446 aaKnown RBP24,37■■□□□ 1,49
Pkp4-210ENSMUST00000168631 Baz1aO88379 1555 aa24,36■■□□□ 1,49
Pkp4-210ENSMUST00000168631 P3h3Q8CG70 732 aa24,33■■□□□ 1,49
Pkp4-210ENSMUST00000168631 Wdr43Q6ZQL4 677 aaKnown RBP24,3■■□□□ 1,48
Pkp4-210ENSMUST00000168631 Kdm2aP59997 1161 aa24,29■■□□□ 1,48
Pkp4-210ENSMUST00000168631 Arhgap27A2AB59 869 aa24,28■■□□□ 1,48
Pkp4-210ENSMUST00000168631 Eea1Q8BL66 1411 aa24,28■■□□□ 1,48
Pkp4-210ENSMUST00000168631 Trim26Q99PN3 545 aa24,25■■□□□ 1,47
Pkp4-210ENSMUST00000168631 Upf2A2AT37 1269 aaKnown RBP24,22■■□□□ 1,47
Pkp4-210ENSMUST00000168631 Safb2Q80YR5 991 aaKnown RBP24,18■■□□□ 1,46
Pkp4-210ENSMUST00000168631 Ofd1Q80Z25 1017 aa24,12■■□□□ 1,45
Pkp4-210ENSMUST00000168631 Mroh3A0A1D5RM54 893 aa24,12■■□□□ 1,45
Pkp4-210ENSMUST00000168631 Rrp7aQ9D1C9 280 aaKnown RBP24,1■■□□□ 1,45
Pkp4-210ENSMUST00000168631 Ccdc18Q640L5 1455 aa24,08■■□□□ 1,45
Pkp4-210ENSMUST00000168631 Hspa5P20029 655 aaKnown RBP24,08■■□□□ 1,45
Pkp4-210ENSMUST00000168631 1700123L14RikQ3V2K7 440 aa24,07■■□□□ 1,44
Pkp4-210ENSMUST00000168631 Card11Q8CIS0 1159 aa24,07■■□□□ 1,44
Pkp4-210ENSMUST00000168631 Kdm5dQ62240 1548 aa24,05■■□□□ 1,44
Pkp4-210ENSMUST00000168631 Ccdc88bQ4QRL3 1481 aa24,05■■□□□ 1,44
Pkp4-210ENSMUST00000168631 Apbb1Q9QXJ1 710 aa24,04■■□□□ 1,44
Pkp4-210ENSMUST00000168631 DiexfQ8BTT6 772 aaKnown RBP24,02■■□□□ 1,44
Pkp4-210ENSMUST00000168631 Irx6Q9ER75 438 aa24■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Gm20521D3Z5F7 333 aa23,96■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Srpk2O54781 681 aaKnown RBP23,96■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Neurod2Q62414 383 aa23,96■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Ercc6F8VPZ5 1481 aa23,95■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Trim30dE9PWL0 497 aa23,95■■□□□ 1,43
Pkp4-210ENSMUST00000168631 Wwc2Q6NXJ0 1187 aa23,94■■□□□ 1,42
Pkp4-210ENSMUST00000168631 Fgd1P52734 960 aa23,94■■□□□ 1,42
Pkp4-210ENSMUST00000168631 Stk24Q99KH8 431 aa23,93■■□□□ 1,42
Pkp4-210ENSMUST00000168631 Mtus2Q3UHD3 1353 aa23,93■■□□□ 1,42
Pkp4-210ENSMUST00000168631 Vsig10D3YX43 558 aa23,92■■□□□ 1,42
Pkp4-210ENSMUST00000168631 Exosc9Q9JHI7 438 aaKnown RBP23,89■■□□□ 1,41
Pkp4-210ENSMUST00000168631 Fam71e1A1L3C1 212 aa23,88■■□□□ 1,41
Pkp4-210ENSMUST00000168631 CanxP35564 591 aaKnown RBP23,88■■□□□ 1,41
Pkp4-210ENSMUST00000168631 IqubQ8CDK3 788 aa23,88■■□□□ 1,41
Pkp4-210ENSMUST00000168631 SafbD3YXK2 937 aaKnown RBP23,85■■□□□ 1,41
Pkp4-210ENSMUST00000168631 Cwc22Q8C5N3 908 aaKnown RBP23,85■■□□□ 1,41
Pkp4-210ENSMUST00000168631 Sin3aQ60520 1274 aaKnown RBP23,85■■□□□ 1,41
Pkp4-210ENSMUST00000168631 Arid4bA2CG63 1314 aaKnown RBP23,83■■□□□ 1,4
Pkp4-210ENSMUST00000168631 Cnga1P29974 684 aa23,81■■□□□ 1,4
Pkp4-210ENSMUST00000168631 DekQ7TNV0 380 aaKnown RBP23,81■■□□□ 1,4
Pkp4-210ENSMUST00000168631 Cep162Q6ZQ06 1403 aa23,81■■□□□ 1,4
Pkp4-210ENSMUST00000168631 Pkd2O35245 966 aa23,79■■□□□ 1,4
Pkp4-210ENSMUST00000168631 Aebp1Q640N1 1128 aa23,79■■□□□ 1,4
Pkp4-210ENSMUST00000168631 NgefQ8CHT1 710 aa23,77■■□□□ 1,4
Pkp4-210ENSMUST00000168631 Hsp90ab1P11499 724 aaKnown RBP23,76■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Arid3cA6PWV5 409 aa23,76■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Kif27Q7M6Z4 1394 aa23,75■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Mia2Q91ZV0 1396 aa23,75■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Map4P27546 1125 aaKnown RBP23,74■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Cabp1Q9JLK7 227 aa23,74■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Dbr1Q923B1 550 aa23,72■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Stag3O70576 1240 aa23,71■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Slc4a3P16283 1227 aa23,71■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Ecm2Q5FW85 670 aa23,71■■□□□ 1,39
Pkp4-210ENSMUST00000168631 Trak1Q6PD31 939 aa23,7■■□□□ 1,38
Pkp4-210ENSMUST00000168631 Gm6268A2A3U9 297 aa23,69■■□□□ 1,38
Pkp4-210ENSMUST00000168631 1700019A02RikA0A087WPV9 146 aa23,69■■□□□ 1,38
Pkp4-210ENSMUST00000168631 Rundc1Q0VDN7 615 aa23,67■■□□□ 1,38
Pkp4-210ENSMUST00000168631 Mapk8ip3Q9ESN9 1337 aa23,66■■□□□ 1,38
Pkp4-210ENSMUST00000168631 Armcx1Q9CX83 456 aa23,65■■□□□ 1,38
Pkp4-210ENSMUST00000168631 Ythdc1E9Q5K9 736 aaKnown RBP23,62■■□□□ 1,37
Pkp4-210ENSMUST00000168631 B4galnt3Q6L8S8 986 aa23,62■■□□□ 1,37
Pkp4-210ENSMUST00000168631 MyclP10166 368 aa23,61■■□□□ 1,37
Pkp4-210ENSMUST00000168631 Ifit1bl1D3Z6F0 470 aa23,59■■□□□ 1,37
Pkp4-210ENSMUST00000168631 Hsp90aa1P07901 733 aaKnown RBP23,59■■□□□ 1,37
Pkp4-210ENSMUST00000168631 Fmn1Q05860 1466 aa23,58■■□□□ 1,37
Pkp4-210ENSMUST00000168631 Pds5bQ4VA53 1446 aaKnown RBP23,58■■□□□ 1,37
Pkp4-210ENSMUST00000168631 Exoc6Q8R313 802 aa23,58■■□□□ 1,36
Pkp4-210ENSMUST00000168631 Mphosph9A6H5Y1 991 aa23,56■■□□□ 1,36
Pkp4-210ENSMUST00000168631 AknaQ80VW7 1404 aa23,54■■□□□ 1,36
Pkp4-210ENSMUST00000168631 Stk26Q99JT2 416 aa23,53■■□□□ 1,36
Pkp4-210ENSMUST00000168631 Rtn4Q99P72 1162 aaKnown RBP23,53■■□□□ 1,36
Pkp4-210ENSMUST00000168631 Rpap1Q80TE0 1409 aa23,53■■□□□ 1,36
Pkp4-210ENSMUST00000168631 Cecr2E9Q2Z1 1453 aa23,52■■□□□ 1,35
Pkp4-210ENSMUST00000168631 Plin1Q8CGN5 517 aa23,51■■□□□ 1,35
Pkp4-210ENSMUST00000168631 CftrP26361 1476 aa23,46■■□□□ 1,35
Pkp4-210ENSMUST00000168631 Cux2P70298 1426 aa23,45■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Ppp1r18Q8BQ30 594 aa23,45■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Plcb2A3KGF7 1181 aa23,44■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Speer4f1Q9D5Q6 258 aa23,43■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Baz1bQ9Z277 1479 aa23,42■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Fyco1Q8VDC1 1437 aa23,42■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Rwdd1Q9CQK7 243 aa23,41■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Lmod3E9QA62 571 aa23,41■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Gtf2e1Q9D0D5 440 aa23,41■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Lemd3Q9WU40 921 aa23,4■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Trim44Q9QXA7 346 aa23,4■■□□□ 1,34
Pkp4-210ENSMUST00000168631 Zscan21Q07231 555 aa23,39■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Spryd3E9Q9B3 442 aa23,37■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Sycp2Q9CUU3 1500 aa23,37■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Rapgef2Q8CHG7 1496 aa23,36■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Chmp5Q9D7S9 219 aa23,36■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Ppm1gQ61074 542 aa23,35■■□□□ 1,33
Pkp4-210ENSMUST00000168631 Supt16hQ920B9 1047 aa23,35■■□□□ 1,33
Retrieved 100 of 22,080 RNA–protein pairs in 11,3 ms