RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ccer2J3QPU5 274 aa16.8■□□□□ 0.28
Pcdh1-202ENSMUST00000159405 Rpap1Q80TE0 1409 aa16.8■□□□□ 0.28
Pcdh1-202ENSMUST00000159405 Ipo9Q91YE6 1041 aa16.79■□□□□ 0.28
Pcdh1-202ENSMUST00000159405 Mrs2Q5NCE8 434 aa16.78■□□□□ 0.28
Pcdh1-202ENSMUST00000159405 Fkbp15Q6P9Q6 1216 aaKnown RBP16.77■□□□□ 0.28
Pcdh1-202ENSMUST00000159405 Washc2Q6PGL7 1334 aa16.76■□□□□ 0.27
Pcdh1-202ENSMUST00000159405 Liat1Q810M6 228 aa16.75■□□□□ 0.27
Pcdh1-202ENSMUST00000159405 Brd4Q9ESU6 1400 aaKnown RBP16.75■□□□□ 0.27
Pcdh1-202ENSMUST00000159405 Sin3aQ60520 1274 aaKnown RBP16.74■□□□□ 0.27
Pcdh1-202ENSMUST00000159405 Ipo4Q8VI75 1082 aa16.74■□□□□ 0.27
Pcdh1-202ENSMUST00000159405 Ubl4bQ9CQ84 188 aa16.7■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 Taok2Q6ZQ29 1240 aa16.69■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 ChgaP26339 463 aaKnown RBP16.68■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 Zbtb4Q5F293 982 aa16.67■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 Egfem1Q8C088 590 aa16.67■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 Rtn4Q99P72 1162 aaKnown RBP16.66■□□□□ 0.26
Pcdh1-202ENSMUST00000159405 Gm13697A2AK42 830 aa16.64■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Hspa5P20029 655 aaKnown RBP16.63■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Tcerg1Q8CGF7 1100 aaKnown RBP16.62■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 NacadQ5SWP3 1504 aa16.61■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Cep162Q6ZQ06 1403 aa16.61■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Ncapd3Q6ZQK0 1506 aa16.6■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Wwc2Q6NXJ0 1187 aa16.6■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Iqcf3Q9D498 203 aa16.59■□□□□ 0.25
Pcdh1-202ENSMUST00000159405 Kdm5dQ62240 1548 aa16.58■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 Smarca2Q6DIC0 1577 aa16.58■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 Smg6P61406 1418 aaKnown RBP16.57■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 NeflP08551 543 aa16.56■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 CanxP35564 591 aaKnown RBP16.56■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 Znf692Q3U381 531 aa16.56■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 Kcnh8P59111 1102 aa16.53■□□□□ 0.24
Pcdh1-202ENSMUST00000159405 Arhgap27A2AB59 869 aa16.51■□□□□ 0.23
Pcdh1-202ENSMUST00000159405 Rapgef2Q8CHG7 1496 aa16.51■□□□□ 0.23
Pcdh1-202ENSMUST00000159405 Ofd1Q80Z25 1017 aa16.5■□□□□ 0.23
Pcdh1-202ENSMUST00000159405 Chic2Q9D9G3 165 aa16.46■□□□□ 0.23
Pcdh1-202ENSMUST00000159405 Exoc6Q8R313 802 aa16.45■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Baz1bQ9Z277 1479 aa16.43■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Plppr3Q7TPB0 716 aa16.42■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Pdcl3Q8BVF2 240 aa16.42■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 ArxO35085 564 aa16.42■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Zfp777B9EKF4 885 aa16.41■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Anp32bQ9EST5 272 aaKnown RBP16.41■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 AU015836B2RUM3 263 aa16.41■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Slc4a2P13808 1237 aaKnown RBP16.41■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Prdm10Q3UTQ7 1184 aa16.4■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 Os9Q8K2C7 672 aa16.4■□□□□ 0.22
Pcdh1-202ENSMUST00000159405 BlmO88700 1416 aa16.37■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 B4galnt3Q6L8S8 986 aa16.37■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 AampJ3QN89 436 aa16.37■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 Sart3Q9JLI8 962 aaKnown RBP16.37■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 Setd5Q5XJV7 1441 aa16.34■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 Spryd3E9Q9B3 442 aa16.34■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 Cecr2E9Q2Z1 1453 aa16.34■□□□□ 0.21
Pcdh1-202ENSMUST00000159405 ScribQ80U72 1612 aa16.33■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Dbr1Q923B1 550 aa16.32■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Eea1Q8BL66 1411 aa16.31■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Kif15Q6P9L6 1387 aa16.3■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Kcnn1Q9EQR3 537 aa16.29■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Erich6D3Z6S9 713 aa16.28■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Dnai1Q8C0M8 701 aa16.27■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Rad21Q61550 635 aaKnown RBP16.27■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Dnttip2Q8R2M2 758 aaKnown RBP16.27■□□□□ 0.2
Pcdh1-202ENSMUST00000159405 Gtf2a1Q99PM3 378 aa16.27■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 Gm13695A2AK44 830 aa16.25■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 Synj1Q8CHC4 1574 aa16.25■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 DmtnQ9WV69 405 aa16.24■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 L3mbtl2P59178 703 aa16.23■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 Crybg2B7ZCC2 1516 aa16.21■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 IbspQ61711 324 aa16.21■□□□□ 0.19
Pcdh1-202ENSMUST00000159405 UacaQ8CGB3 1411 aa16.2■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Armcx1Q9CX83 456 aa16.19■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Rrp9Q91WM3 475 aaKnown RBP16.18■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Ttll13A4Q9F6 804 aa16.18■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Ppm1gQ61074 542 aa16.17■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Trim30dE9PWL0 497 aa16.16■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Mre11Q61216 706 aa16.16■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Ccdc18Q640L5 1455 aa16.16■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 Mroh3A0A1D5RM54 893 aa16.15■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 NgefQ8CHT1 710 aa16.15■□□□□ 0.18
Pcdh1-202ENSMUST00000159405 PnisrA2AJT4 805 aaKnown RBP16.13■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Hsp90ab1P11499 724 aaKnown RBP16.13■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 CftrP26361 1476 aa16.12■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Arap1Q4LDD4 1452 aa16.1■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Chmp5Q9D7S9 219 aa16.1■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Fmn1Q05860 1466 aa16.1■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 CntlnA2AM05 1397 aa16.09■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Kdm5bQ80Y84 1544 aa16.09■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 4930567H17RikQ3V0K5 233 aa16.09■□□□□ 0.17
Pcdh1-202ENSMUST00000159405 Eif2s2Q99L45 331 aaKnown RBP16.07■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Htatsf1Q8BGC0 757 aa16.07■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 NudcO35685 332 aaKnown RBP16.07■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Nkx1-2P42580 305 aa16.07■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Apbb1Q9QXJ1 710 aa16.06■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Cc2d2aQ8CFW7 1633 aa16.05■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Atp1b4Q99ME6 356 aa16.04■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 EspnQ9ET47 871 aa16.04■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Prkrip1Q9CWV6 186 aaKnown RBP16.04■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Mia2Q91ZV0 1396 aa16.03■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Gm6268A2A3U9 297 aa16.03■□□□□ 0.16
Pcdh1-202ENSMUST00000159405 Chrna2Q91X60 512 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 90.4 ms