RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Fam50aQ9WV03 339 aaKnown RBP16.21■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 Frmpd1A2AKB4 1549 aa16.2■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Rpap1Q80TE0 1409 aa16.18■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Gtf3c5Q8R2T8 520 aa16.18■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Ercc6F8VPZ5 1481 aa16.17■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Arap1Q4LDD4 1452 aa16.16■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Rtl5Q5DTT4 599 aa16.16■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Nolc1E9Q5C9 702 aaKnown RBP16.15■□□□□ 0.18
Prpf40b-208ENSMUST00000136980 Unc13aQ4KUS2 1712 aa16.14■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Anp32aO35381 247 aa16.14■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Setd5Q5XJV7 1441 aa16.12■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Kdm5bQ80Y84 1544 aa16.12■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Eea1Q8BL66 1411 aa16.11■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Lmod2Q3UHZ5 550 aa16.11■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 PtprkP35822 1457 aa16.11■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Arhgap35Q91YM2 1499 aa16.1■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Eif4g1Q6NZJ6 1600 aaKnown RBP16.09■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Calr4Q3TQS0 420 aa16.08■□□□□ 0.17
Prpf40b-208ENSMUST00000136980 Hspa5P20029 655 aaKnown RBP16.08■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 BlmO88700 1416 aa16.05■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 Baz1bQ9Z277 1479 aa16.05■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 Sin3aQ60520 1274 aaKnown RBP16.03■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 Pelp1Q9DBD5 1123 aaKnown RBP16.03■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 Stra8P70278 393 aa16.02■□□□□ 0.16
Prpf40b-208ENSMUST00000136980 Fam135aQ6NS59 1506 aa16.01■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Eif5bQ05D44 1216 aaKnown RBP16.01■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Dnajc5bQ9CQ94 199 aa16■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Arhgef5E9Q7D5 1581 aa15.99■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 BccipQ9CWI3 316 aa15.99■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 AqrQ8CFQ3 1481 aaKnown RBP15.98■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Ccdc18Q640L5 1455 aa15.97■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Gtf3c3Q3TMP1 882 aa15.96■□□□□ 0.15
Prpf40b-208ENSMUST00000136980 Ube2uB1AUC4 352 aa15.94■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Ppp4r2Q0VGB7 417 aa15.94■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Plcd4Q8K3R3 807 aa15.94■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Supt16hQ920B9 1047 aa15.94■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Phldb1Q6PDH0 1371 aaKnown RBP15.92■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 P3h3Q8CG70 732 aa15.91■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Naip1Q9QWK5 1403 aa15.9■□□□□ 0.14
Prpf40b-208ENSMUST00000136980 Gm13697A2AK42 830 aa15.89■□□□□ 0.13
Prpf40b-208ENSMUST00000136980 Tiam1Q60610 1591 aa15.87■□□□□ 0.13
Prpf40b-208ENSMUST00000136980 NrkQ9R0G8 1455 aa15.86■□□□□ 0.13
Prpf40b-208ENSMUST00000136980 TnnQ80Z71 1560 aa15.83■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Lamc3Q9R0B6 1581 aa15.83■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Wdr43Q6ZQL4 677 aaKnown RBP15.81■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Pak3Q61036 559 aa15.81■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 TimelessQ9R1X4 1197 aa15.81■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Chic2Q9D9G3 165 aa15.81■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 3425401B19RikD3Z1D3 1412 aa15.8■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Smg6P61406 1418 aaKnown RBP15.8■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Slx4Q6P1D7 1565 aa15.79■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 TchhA0A0B4J1F9 1599 aa15.79■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Kif15Q6P9L6 1387 aa15.79■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Upf2A2AT37 1269 aaKnown RBP15.78■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Zfp777B9EKF4 885 aa15.78■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Dhx29Q6PGC1 1365 aaKnown RBP15.78■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 UacaQ8CGB3 1411 aa15.78■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Mrs2Q5NCE8 434 aa15.77■□□□□ 0.12
Prpf40b-208ENSMUST00000136980 Shroom4Q1W617 1475 aa15.77■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Slc4a3P16283 1227 aa15.77■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Irx3P81067 507 aa15.76■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Wwc2Q6NXJ0 1187 aa15.75■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Pcf11G3X9Z4 1553 aa15.73■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Washc2Q6PGL7 1334 aa15.72■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Ankrd26Q811D2 1581 aa15.72■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Ubl4bQ9CQ84 188 aa15.71■□□□□ 0.11
Prpf40b-208ENSMUST00000136980 Scaf1Q5U4C3 1256 aaKnown RBP15.7■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Slc4a2P13808 1237 aaKnown RBP15.68■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Map3k1P53349 1493 aa15.67■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Liat1Q810M6 228 aa15.67■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Mroh2bQ7M6Y6 1581 aa15.67■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Ccer2J3QPU5 274 aa15.67■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Znf316Q6PGE4 1016 aa15.66■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Ccdc9Q8VC31 543 aaKnown RBP15.66■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Ipo4Q8VI75 1082 aa15.66■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Fhad1A6PWD2 1420 aa15.66■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Ankrd36D3Z4K0 1415 aa15.65■□□□□ 0.1
Prpf40b-208ENSMUST00000136980 Mia2Q91ZV0 1396 aa15.64■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Exoc6Q8R313 802 aa15.64■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Camsap1A2AHC3 1581 aa15.62■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Kcnh8P59111 1102 aa15.62■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 CntlnA2AM05 1397 aa15.61■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Naip5Q9R016 1403 aa15.61■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Cux1P53564 1515 aa15.61■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Fyco1Q8VDC1 1437 aa15.6■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Cux2P70298 1426 aa15.6■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Vps8Q0P5W1 1427 aa15.6■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Egfem1Q8C088 590 aa15.6■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Erich3F6QRE9 1637 aa15.59■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Aebp1Q640N1 1128 aa15.59■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 ArxO35085 564 aa15.59■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Ccdc27Q3V036 639 aa15.59■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Mrc2Q64449 1479 aa15.59■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Grin2bQ01097 1482 aa15.58■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Naip2Q9QUK4 1447 aa15.58■□□□□ 0.09
Prpf40b-208ENSMUST00000136980 Ncoa2Q61026 1462 aa15.58■□□□□ 0.08
Prpf40b-208ENSMUST00000136980 Gm7298A0A0N4SVU1 1476 aa15.55■□□□□ 0.08
Prpf40b-208ENSMUST00000136980 A2mQ6GQT1 1474 aa15.54■□□□□ 0.08
Prpf40b-208ENSMUST00000136980 Efcab5A0JP43 1406 aa15.53■□□□□ 0.08
Prpf40b-208ENSMUST00000136980 Mphosph9A6H5Y1 991 aa15.53■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms