RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 BlmO88700 1416 aa22.39■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Sall2Q9QX96 1004 aa22.39■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Arid4bA2CG63 1314 aaKnown RBP22.38■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Brd4Q9ESU6 1400 aaKnown RBP22.37■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Clstn1Q9EPL2 979 aa22.34■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Lmod3E9QA62 571 aa22.34■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Upf2A2AT37 1269 aaKnown RBP22.33■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Mrs2Q5NCE8 434 aa22.31■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Arhgap27A2AB59 869 aa22.3■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Ecm2Q5FW85 670 aa22.27■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Grwd1Q810D6 446 aaKnown RBP22.27■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Calr4Q3TQS0 420 aa22.26■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Znf326O88291 580 aa22.25■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Apbb1Q9QXJ1 710 aa22.24■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Clstn2Q9ER65 966 aa22.19■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Stk24Q99KH8 431 aa22.17■■□□□ 1.14
Shroom3-201ENSMUST00000113051 IqubQ8CDK3 788 aa22.16■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Exosc9Q9JHI7 438 aaKnown RBP22.15■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Abcc8B2RUS7 1588 aa22.14■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Ccer2J3QPU5 274 aa22.13■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Neurod2Q62414 383 aa22.13■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Srpk2O54781 681 aaKnown RBP22.12■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Aplp2Q06335 707 aa22.1■■□□□ 1.13
Shroom3-201ENSMUST00000113051 1700019A02RikA0A087WPV9 146 aa22.1■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Cnga1P29974 684 aa22.08■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Gm20521D3Z5F7 333 aa22.07■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Rb1cc1Q9ESK9 1588 aa22.06■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Rrp7aQ9D1C9 280 aaKnown RBP22.06■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Setd5Q5XJV7 1441 aa22.05■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Mroh3A0A1D5RM54 893 aa22.04■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Armcx1Q9CX83 456 aa22.04■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Ppp1r18Q8BQ30 594 aa22.03■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Trim30dE9PWL0 497 aa22.02■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Gm6268A2A3U9 297 aa22.02■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Kif15Q6P9L6 1387 aa22.01■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Stag3O70576 1240 aa22.01■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Hsp90ab1P11499 724 aaKnown RBP22■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Ggt6Q6PDE7 497 aa22■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Q8BT18 775 aa21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Cep164Q5DU05 1446 aa21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Wdr43Q6ZQL4 677 aaKnown RBP21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Plin1Q8CGN5 517 aa21.94■■□□□ 1.1
Shroom3-201ENSMUST00000113051 Card11Q8CIS0 1159 aa21.89■■□□□ 1.1
Shroom3-201ENSMUST00000113051 Dbr1Q923B1 550 aa21.89■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Mapk8ip3Q9ESN9 1337 aa21.88■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Ofd1Q80Z25 1017 aa21.87■■□□□ 1.09
Shroom3-201ENSMUST00000113051 CanxP35564 591 aaKnown RBP21.85■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Ubap1lG3UW59 384 aa21.85■■□□□ 1.09
Shroom3-201ENSMUST00000113051 MlecQ6ZQI3 291 aaKnown RBP21.84■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Dcaf1Q80TR8 1506 aa21.84■■□□□ 1.09
Shroom3-201ENSMUST00000113051 PtmaP26350 111 aa21.83■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Anks4bQ8K3X6 423 aa21.81■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Senp3Q9EP97 568 aaKnown RBP21.8■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Arid3cA6PWV5 409 aa21.79■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Stk26Q99JT2 416 aa21.79■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Ercc6F8VPZ5 1481 aa21.77■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Plcb2A3KGF7 1181 aa21.76■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Pes1Q9EQ61 584 aaKnown RBP21.76■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Sox12Q04890 314 aa21.75■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Trim44Q9QXA7 346 aa21.75■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Rsf1E9PWW9 1441 aaKnown RBP21.74■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Aebp2Q9Z248 504 aaKnown RBP21.74■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Tnnt1O88346 262 aa21.7■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Spryd3E9Q9B3 442 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Mtus2Q3UHD3 1353 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Sh3bp5Q9Z131 463 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 B4galnt3Q6L8S8 986 aa21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 U2surpQ6NV83 1029 aaKnown RBP21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 PnnO35691 725 aaKnown RBP21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Ccdc18Q640L5 1455 aa21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Hsp90b1P08113 802 aaKnown RBP21.65■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Znf316Q6PGE4 1016 aa21.65■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Iqcf3Q9D498 203 aa21.6■■□□□ 1.05
Shroom3-201ENSMUST00000113051 AknaQ80VW7 1404 aa21.59■■□□□ 1.05
Shroom3-201ENSMUST00000113051 Psme1P97371 249 aa21.55■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Rassf8Q8CJ96 419 aa21.55■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Slc4a3P16283 1227 aa21.52■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Birc3O08863 600 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Ppm1fQ8CGA0 452 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Rtf1A2AQ19 715 aaKnown RBP21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Eea1Q8BL66 1411 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Txndc2Q6P902 515 aa21.48■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Anapc15P60007 132 aa21.48■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Ifit1bl1D3Z6F0 470 aa21.47■■□□□ 1.03
Shroom3-201ENSMUST00000113051 NudcO35685 332 aaKnown RBP21.45■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Wwc2Q6NXJ0 1187 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Fam71e1A1L3C1 212 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Hspa5P20029 655 aaKnown RBP21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Znf330Q922H9 316 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Pibf1E9Q6K3 756 aa21.42■■□□□ 1.02
Shroom3-201ENSMUST00000113051 NacadQ5SWP3 1504 aa21.41■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Map4P27546 1125 aaKnown RBP21.41■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Cwc22Q8C5N3 908 aaKnown RBP21.4■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Tmco5bQ80X59 307 aa21.4■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Casc1Q6TDU8 730 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Rundc1Q0VDN7 615 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Golga3P55937 1487 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Pcmtd1P59913 357 aa21.37■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Map7O88735 730 aa21.37■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Speer4f1Q9D5Q6 258 aa21.36■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms