RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

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Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 BlmO88700 1416 aa22,39■■□□□ 1,18
Shroom3-201ENSMUST00000113051 Sall2Q9QX96 1004 aa22,39■■□□□ 1,17
Shroom3-201ENSMUST00000113051 Arid4bA2CG63 1314 aaKnown RBP22,38■■□□□ 1,17
Shroom3-201ENSMUST00000113051 Brd4Q9ESU6 1400 aaKnown RBP22,37■■□□□ 1,17
Shroom3-201ENSMUST00000113051 Clstn1Q9EPL2 979 aa22,34■■□□□ 1,17
Shroom3-201ENSMUST00000113051 Lmod3E9QA62 571 aa22,34■■□□□ 1,17
Shroom3-201ENSMUST00000113051 Upf2A2AT37 1269 aaKnown RBP22,33■■□□□ 1,16
Shroom3-201ENSMUST00000113051 Mrs2Q5NCE8 434 aa22,31■■□□□ 1,16
Shroom3-201ENSMUST00000113051 Arhgap27A2AB59 869 aa22,3■■□□□ 1,16
Shroom3-201ENSMUST00000113051 Ecm2Q5FW85 670 aa22,27■■□□□ 1,15
Shroom3-201ENSMUST00000113051 Grwd1Q810D6 446 aaKnown RBP22,27■■□□□ 1,15
Shroom3-201ENSMUST00000113051 Calr4Q3TQS0 420 aa22,26■■□□□ 1,15
Shroom3-201ENSMUST00000113051 Znf326O88291 580 aa22,25■■□□□ 1,15
Shroom3-201ENSMUST00000113051 Apbb1Q9QXJ1 710 aa22,24■■□□□ 1,15
Shroom3-201ENSMUST00000113051 Clstn2Q9ER65 966 aa22,19■■□□□ 1,14
Shroom3-201ENSMUST00000113051 Stk24Q99KH8 431 aa22,17■■□□□ 1,14
Shroom3-201ENSMUST00000113051 IqubQ8CDK3 788 aa22,16■■□□□ 1,14
Shroom3-201ENSMUST00000113051 Exosc9Q9JHI7 438 aaKnown RBP22,15■■□□□ 1,14
Shroom3-201ENSMUST00000113051 Abcc8B2RUS7 1588 aa22,14■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Ccer2J3QPU5 274 aa22,13■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Neurod2Q62414 383 aa22,13■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Srpk2O54781 681 aaKnown RBP22,12■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Aplp2Q06335 707 aa22,1■■□□□ 1,13
Shroom3-201ENSMUST00000113051 1700019A02RikA0A087WPV9 146 aa22,1■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Cnga1P29974 684 aa22,08■■□□□ 1,13
Shroom3-201ENSMUST00000113051 Gm20521D3Z5F7 333 aa22,07■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Rb1cc1Q9ESK9 1588 aa22,06■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Rrp7aQ9D1C9 280 aaKnown RBP22,06■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Setd5Q5XJV7 1441 aa22,05■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Mroh3A0A1D5RM54 893 aa22,04■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Armcx1Q9CX83 456 aa22,04■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Ppp1r18Q8BQ30 594 aa22,03■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Trim30dE9PWL0 497 aa22,02■■□□□ 1,12
Shroom3-201ENSMUST00000113051 Gm6268A2A3U9 297 aa22,02■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Kif15Q6P9L6 1387 aa22,01■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Stag3O70576 1240 aa22,01■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Hsp90ab1P11499 724 aaKnown RBP22■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Ggt6Q6PDE7 497 aa22■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Q8BT18 775 aa21,97■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Cep164Q5DU05 1446 aa21,97■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Wdr43Q6ZQL4 677 aaKnown RBP21,97■■□□□ 1,11
Shroom3-201ENSMUST00000113051 Plin1Q8CGN5 517 aa21,94■■□□□ 1,1
Shroom3-201ENSMUST00000113051 Card11Q8CIS0 1159 aa21,89■■□□□ 1,1
Shroom3-201ENSMUST00000113051 Dbr1Q923B1 550 aa21,89■■□□□ 1,09
Shroom3-201ENSMUST00000113051 Mapk8ip3Q9ESN9 1337 aa21,88■■□□□ 1,09
Shroom3-201ENSMUST00000113051 Ofd1Q80Z25 1017 aa21,87■■□□□ 1,09
Shroom3-201ENSMUST00000113051 CanxP35564 591 aaKnown RBP21,85■■□□□ 1,09
Shroom3-201ENSMUST00000113051 Ubap1lG3UW59 384 aa21,85■■□□□ 1,09
Shroom3-201ENSMUST00000113051 MlecQ6ZQI3 291 aaKnown RBP21,84■■□□□ 1,09
Shroom3-201ENSMUST00000113051 Dcaf1Q80TR8 1506 aa21,84■■□□□ 1,09
Shroom3-201ENSMUST00000113051 PtmaP26350 111 aa21,83■■□□□ 1,09
Shroom3-201ENSMUST00000113051 Anks4bQ8K3X6 423 aa21,81■■□□□ 1,08
Shroom3-201ENSMUST00000113051 Senp3Q9EP97 568 aaKnown RBP21,8■■□□□ 1,08
Shroom3-201ENSMUST00000113051 Arid3cA6PWV5 409 aa21,79■■□□□ 1,08
Shroom3-201ENSMUST00000113051 Stk26Q99JT2 416 aa21,79■■□□□ 1,08
Shroom3-201ENSMUST00000113051 Ercc6F8VPZ5 1481 aa21,77■■□□□ 1,08
Shroom3-201ENSMUST00000113051 Plcb2A3KGF7 1181 aa21,76■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Pes1Q9EQ61 584 aaKnown RBP21,76■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Sox12Q04890 314 aa21,75■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Trim44Q9QXA7 346 aa21,75■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Rsf1E9PWW9 1441 aaKnown RBP21,74■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Aebp2Q9Z248 504 aaKnown RBP21,74■■□□□ 1,07
Shroom3-201ENSMUST00000113051 Tnnt1O88346 262 aa21,7■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Spryd3E9Q9B3 442 aa21,68■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Mtus2Q3UHD3 1353 aa21,68■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Sh3bp5Q9Z131 463 aa21,68■■□□□ 1,06
Shroom3-201ENSMUST00000113051 B4galnt3Q6L8S8 986 aa21,67■■□□□ 1,06
Shroom3-201ENSMUST00000113051 U2surpQ6NV83 1029 aaKnown RBP21,67■■□□□ 1,06
Shroom3-201ENSMUST00000113051 PnnO35691 725 aaKnown RBP21,67■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Ccdc18Q640L5 1455 aa21,67■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Hsp90b1P08113 802 aaKnown RBP21,65■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Znf316Q6PGE4 1016 aa21,65■■□□□ 1,06
Shroom3-201ENSMUST00000113051 Iqcf3Q9D498 203 aa21,6■■□□□ 1,05
Shroom3-201ENSMUST00000113051 AknaQ80VW7 1404 aa21,59■■□□□ 1,05
Shroom3-201ENSMUST00000113051 Psme1P97371 249 aa21,55■■□□□ 1,04
Shroom3-201ENSMUST00000113051 Rassf8Q8CJ96 419 aa21,55■■□□□ 1,04
Shroom3-201ENSMUST00000113051 Slc4a3P16283 1227 aa21,52■■□□□ 1,04
Shroom3-201ENSMUST00000113051 Birc3O08863 600 aa21,51■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Ppm1fQ8CGA0 452 aa21,51■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Rtf1A2AQ19 715 aaKnown RBP21,51■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Eea1Q8BL66 1411 aa21,51■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Txndc2Q6P902 515 aa21,48■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Anapc15P60007 132 aa21,48■■□□□ 1,03
Shroom3-201ENSMUST00000113051 Ifit1bl1D3Z6F0 470 aa21,47■■□□□ 1,03
Shroom3-201ENSMUST00000113051 NudcO35685 332 aaKnown RBP21,45■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Wwc2Q6NXJ0 1187 aa21,44■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Fam71e1A1L3C1 212 aa21,44■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Hspa5P20029 655 aaKnown RBP21,44■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Znf330Q922H9 316 aa21,44■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Pibf1E9Q6K3 756 aa21,42■■□□□ 1,02
Shroom3-201ENSMUST00000113051 NacadQ5SWP3 1504 aa21,41■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Map4P27546 1125 aaKnown RBP21,41■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Cwc22Q8C5N3 908 aaKnown RBP21,4■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Tmco5bQ80X59 307 aa21,4■■□□□ 1,02
Shroom3-201ENSMUST00000113051 Casc1Q6TDU8 730 aa21,38■■□□□ 1,01
Shroom3-201ENSMUST00000113051 Rundc1Q0VDN7 615 aa21,38■■□□□ 1,01
Shroom3-201ENSMUST00000113051 Golga3P55937 1487 aa21,38■■□□□ 1,01
Shroom3-201ENSMUST00000113051 Pcmtd1P59913 357 aa21,37■■□□□ 1,01
Shroom3-201ENSMUST00000113051 Map7O88735 730 aa21,37■■□□□ 1,01
Shroom3-201ENSMUST00000113051 Speer4f1Q9D5Q6 258 aa21,36■■□□□ 1,01
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms