RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 BlmO88700 1416 aa22.39■■□□□ 1.18
Shroom3-201ENSMUST00000113051 Sall2Q9QX96 1004 aa22.39■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Arid4bA2CG63 1314 aaKnown RBP22.38■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Brd4Q9ESU6 1400 aaKnown RBP22.37■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Clstn1Q9EPL2 979 aa22.34■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Lmod3E9QA62 571 aa22.34■■□□□ 1.17
Shroom3-201ENSMUST00000113051 Upf2A2AT37 1269 aaKnown RBP22.33■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Mrs2Q5NCE8 434 aa22.31■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Arhgap27A2AB59 869 aa22.3■■□□□ 1.16
Shroom3-201ENSMUST00000113051 Ecm2Q5FW85 670 aa22.27■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Grwd1Q810D6 446 aaKnown RBP22.27■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Calr4Q3TQS0 420 aa22.26■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Znf326O88291 580 aa22.25■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Apbb1Q9QXJ1 710 aa22.24■■□□□ 1.15
Shroom3-201ENSMUST00000113051 Clstn2Q9ER65 966 aa22.19■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Stk24Q99KH8 431 aa22.17■■□□□ 1.14
Shroom3-201ENSMUST00000113051 IqubQ8CDK3 788 aa22.16■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Exosc9Q9JHI7 438 aaKnown RBP22.15■■□□□ 1.14
Shroom3-201ENSMUST00000113051 Abcc8B2RUS7 1588 aa22.14■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Ccer2J3QPU5 274 aa22.13■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Neurod2Q62414 383 aa22.13■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Srpk2O54781 681 aaKnown RBP22.12■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Aplp2Q06335 707 aa22.1■■□□□ 1.13
Shroom3-201ENSMUST00000113051 1700019A02RikA0A087WPV9 146 aa22.1■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Cnga1P29974 684 aa22.08■■□□□ 1.13
Shroom3-201ENSMUST00000113051 Gm20521D3Z5F7 333 aa22.07■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Rb1cc1Q9ESK9 1588 aa22.06■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Rrp7aQ9D1C9 280 aaKnown RBP22.06■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Setd5Q5XJV7 1441 aa22.05■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Mroh3A0A1D5RM54 893 aa22.04■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Armcx1Q9CX83 456 aa22.04■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Ppp1r18Q8BQ30 594 aa22.03■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Trim30dE9PWL0 497 aa22.02■■□□□ 1.12
Shroom3-201ENSMUST00000113051 Gm6268A2A3U9 297 aa22.02■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Kif15Q6P9L6 1387 aa22.01■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Stag3O70576 1240 aa22.01■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Hsp90ab1P11499 724 aaKnown RBP22■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Ggt6Q6PDE7 497 aa22■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Q8BT18 775 aa21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Cep164Q5DU05 1446 aa21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Wdr43Q6ZQL4 677 aaKnown RBP21.97■■□□□ 1.11
Shroom3-201ENSMUST00000113051 Plin1Q8CGN5 517 aa21.94■■□□□ 1.1
Shroom3-201ENSMUST00000113051 Card11Q8CIS0 1159 aa21.89■■□□□ 1.1
Shroom3-201ENSMUST00000113051 Dbr1Q923B1 550 aa21.89■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Mapk8ip3Q9ESN9 1337 aa21.88■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Ofd1Q80Z25 1017 aa21.87■■□□□ 1.09
Shroom3-201ENSMUST00000113051 CanxP35564 591 aaKnown RBP21.85■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Ubap1lG3UW59 384 aa21.85■■□□□ 1.09
Shroom3-201ENSMUST00000113051 MlecQ6ZQI3 291 aaKnown RBP21.84■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Dcaf1Q80TR8 1506 aa21.84■■□□□ 1.09
Shroom3-201ENSMUST00000113051 PtmaP26350 111 aa21.83■■□□□ 1.09
Shroom3-201ENSMUST00000113051 Anks4bQ8K3X6 423 aa21.81■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Senp3Q9EP97 568 aaKnown RBP21.8■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Arid3cA6PWV5 409 aa21.79■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Stk26Q99JT2 416 aa21.79■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Ercc6F8VPZ5 1481 aa21.77■■□□□ 1.08
Shroom3-201ENSMUST00000113051 Plcb2A3KGF7 1181 aa21.76■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Pes1Q9EQ61 584 aaKnown RBP21.76■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Sox12Q04890 314 aa21.75■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Trim44Q9QXA7 346 aa21.75■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Rsf1E9PWW9 1441 aaKnown RBP21.74■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Aebp2Q9Z248 504 aaKnown RBP21.74■■□□□ 1.07
Shroom3-201ENSMUST00000113051 Tnnt1O88346 262 aa21.7■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Spryd3E9Q9B3 442 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Mtus2Q3UHD3 1353 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Sh3bp5Q9Z131 463 aa21.68■■□□□ 1.06
Shroom3-201ENSMUST00000113051 B4galnt3Q6L8S8 986 aa21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 U2surpQ6NV83 1029 aaKnown RBP21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 PnnO35691 725 aaKnown RBP21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Ccdc18Q640L5 1455 aa21.67■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Hsp90b1P08113 802 aaKnown RBP21.65■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Znf316Q6PGE4 1016 aa21.65■■□□□ 1.06
Shroom3-201ENSMUST00000113051 Iqcf3Q9D498 203 aa21.6■■□□□ 1.05
Shroom3-201ENSMUST00000113051 AknaQ80VW7 1404 aa21.59■■□□□ 1.05
Shroom3-201ENSMUST00000113051 Psme1P97371 249 aa21.55■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Rassf8Q8CJ96 419 aa21.55■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Slc4a3P16283 1227 aa21.52■■□□□ 1.04
Shroom3-201ENSMUST00000113051 Birc3O08863 600 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Ppm1fQ8CGA0 452 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Rtf1A2AQ19 715 aaKnown RBP21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Eea1Q8BL66 1411 aa21.51■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Txndc2Q6P902 515 aa21.48■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Anapc15P60007 132 aa21.48■■□□□ 1.03
Shroom3-201ENSMUST00000113051 Ifit1bl1D3Z6F0 470 aa21.47■■□□□ 1.03
Shroom3-201ENSMUST00000113051 NudcO35685 332 aaKnown RBP21.45■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Wwc2Q6NXJ0 1187 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Fam71e1A1L3C1 212 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Hspa5P20029 655 aaKnown RBP21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Znf330Q922H9 316 aa21.44■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Pibf1E9Q6K3 756 aa21.42■■□□□ 1.02
Shroom3-201ENSMUST00000113051 NacadQ5SWP3 1504 aa21.41■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Map4P27546 1125 aaKnown RBP21.41■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Cwc22Q8C5N3 908 aaKnown RBP21.4■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Tmco5bQ80X59 307 aa21.4■■□□□ 1.02
Shroom3-201ENSMUST00000113051 Casc1Q6TDU8 730 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Rundc1Q0VDN7 615 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Golga3P55937 1487 aa21.38■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Pcmtd1P59913 357 aa21.37■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Map7O88735 730 aa21.37■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Speer4f1Q9D5Q6 258 aa21.36■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms