RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Mrc2Q64449 1479 aa10.2□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Cngb1E1AZ71 1325 aa10.19□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Rsf1E9PWW9 1441 aaKnown RBP10.18□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Kif15Q6P9L6 1387 aa10.18□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Anks4bQ8K3X6 423 aa10.18□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Aplp2Q06335 707 aa10.16□□□□□ -0.78
Ccr9-201ENSMUST00000111454 Golga3P55937 1487 aa10.14□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Cux2P70298 1426 aa10.13□□□□□ -0.79
Ccr9-201ENSMUST00000111454 A0A1Y7VLE6 161 aa10.13□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Abcb7Q61102 752 aaKnown RBP10.13□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Bach1P97302 739 aa10.1□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Fxr2Q9WVR4 673 aaKnown RBP10.1□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Lamc3Q9R0B6 1581 aa10.09□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Csrnp3P59055 597 aa10.09□□□□□ -0.79
Ccr9-201ENSMUST00000111454 Cep164Q5DU05 1446 aa10.08□□□□□ -0.8
Ccr9-201ENSMUST00000111454 Npm1Q61937 292 aaKnown RBP10.08□□□□□ -0.8
Ccr9-201ENSMUST00000111454 Top2bQ64511 1612 aa10.07□□□□□ -0.8
Ccr9-201ENSMUST00000111454 Il27Q8K3I6 234 aa10.06□□□□□ -0.8
Ccr9-201ENSMUST00000111454 Amer1Q7TS75 1132 aa10.04□□□□□ -0.8
Ccr9-201ENSMUST00000111454 Krtap28-13A0A087WQP5 138 aa10.03□□□□□ -0.8
Ccr9-201ENSMUST00000111454 CatipB9EKE5 520 aa10.03□□□□□ -0.8
Ccr9-201ENSMUST00000111454 TnnQ80Z71 1560 aa10□□□□□ -0.81
Ccr9-201ENSMUST00000111454 Kif21aQ9QXL2 1672 aa9.99□□□□□ -0.81
Ccr9-201ENSMUST00000111454 Fmn1Q05860 1466 aa9.99□□□□□ -0.81
Ccr9-201ENSMUST00000111454 Ccdc18Q640L5 1455 aa9.99□□□□□ -0.81
Ccr9-201ENSMUST00000111454 Lrriq1Q0P5X1 1673 aa9.95□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Ccdc88bQ4QRL3 1481 aa9.95□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Rnf216P58283 853 aa9.95□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Camsap1A2AHC3 1581 aa9.94□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Dhx29Q6PGC1 1365 aaKnown RBP9.93□□□□□ -0.82
Ccr9-201ENSMUST00000111454 PrkcshO08795 521 aa9.93□□□□□ -0.82
Ccr9-201ENSMUST00000111454 LrpprcQ6PB66 1392 aaKnown RBP9.93□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Arid3aQ62431 601 aa9.9□□□□□ -0.82
Ccr9-201ENSMUST00000111454 Plb1Q3TTY0 1478 aa9.87□□□□□ -0.83
Ccr9-201ENSMUST00000111454 PogzQ8BZH4 1409 aaKnown RBP9.86□□□□□ -0.83
Ccr9-201ENSMUST00000111454 Urb2E9Q7L1 1524 aaKnown RBP9.86□□□□□ -0.83
Ccr9-201ENSMUST00000111454 Crocc2F6XLV1 1638 aa9.85□□□□□ -0.83
Ccr9-201ENSMUST00000111454 Grin2bQ01097 1482 aa9.83□□□□□ -0.84
Ccr9-201ENSMUST00000111454 A030005K14RikA0A1Y7VNY1 122 aa9.83□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Prdm16A2A935 1275 aa9.83□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Duox2A2AQ99 1517 aa9.83□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Sall2Q9QX96 1004 aa9.82□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Fam71e1A1L3C1 212 aa9.82□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Pcdh10E9PXQ7 1057 aa9.81□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Nkx1-1G3UXB3 402 aa9.81□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Top2aQ01320 1528 aaKnown RBP9.81□□□□□ -0.84
Ccr9-201ENSMUST00000111454 NefmP08553 848 aa9.81□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Eif4g3Q80XI3 1579 aaKnown RBP9.79□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Zeb1Q64318 1117 aa9.78□□□□□ -0.84
Ccr9-201ENSMUST00000111454 Kiaa1522A2A7S8 1013 aa9.77□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Ifnlr1Q8CGK5 535 aa9.77□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Rnf225Q9D7D1 332 aa9.77□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Efcab5A0JP43 1406 aa9.77□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Ift140E9PY46 1464 aa9.76□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Cdk11bP24788 784 aaKnown RBP9.76□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Pitpnm1O35954 1243 aa9.75□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Prdm10Q3UTQ7 1184 aa9.74□□□□□ -0.85
Ccr9-201ENSMUST00000111454 NrkQ9R0G8 1455 aa9.74□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Samd9lQ69Z37 1561 aa9.74□□□□□ -0.85
Ccr9-201ENSMUST00000111454 PtprkP35822 1457 aa9.73□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Disp1Q3TDN0 1521 aa9.72□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Taok2Q6ZQ29 1240 aa9.71□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Npm2Q80W85 207 aa9.71□□□□□ -0.85
Ccr9-201ENSMUST00000111454 Shroom4Q1W617 1475 aa9.71□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Rad54l2Q99NG0 1466 aa9.71□□□□□ -0.86
Ccr9-201ENSMUST00000111454 UbtfP25976 765 aaKnown RBP9.7□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Rusc2Q80U22 1514 aa9.69□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Rtl5Q5DTT4 599 aa9.69□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Nop58Q6DFW4 536 aaKnown RBP9.68□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Trim35Q8C006 501 aa9.67□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Atf5O70191 283 aa9.66□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Nup160Q9Z0W3 1402 aaKnown RBP9.66□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Grin2aP35436 1464 aa9.65□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Cc2d2bA0A286YDU8 1405 aa9.65□□□□□ -0.86
Ccr9-201ENSMUST00000111454 Rapgef2Q8CHG7 1496 aa9.64□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Gm38655A0A286YDK6 273 aa9.64□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Magi3Q9EQJ9 1476 aa9.64□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Setd1bQ8CFT2 1985 aa9.63□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Slc4a1apE9PX68 744 aa9.63□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Pelp1Q9DBD5 1123 aaKnown RBP9.63□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Pbrm1Q8BSQ9 1634 aaKnown RBP9.62□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Shroom2A2ALU4 1481 aa9.62□□□□□ -0.87
Ccr9-201ENSMUST00000111454 SynmQ70IV5 1561 aa9.62□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Mier1Q5UAK0 511 aa9.62□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Pabpn1Q8CCS6 302 aaKnown RBP9.62□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Hs6st3Q9QYK4 470 aa9.61□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Myt1lP97500 1187 aa9.61□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Dcbld2Q91ZV3 769 aa9.61□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Pla2r1Q62028 1487 aa9.59□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Mroh2bQ7M6Y6 1581 aa9.59□□□□□ -0.87
Ccr9-201ENSMUST00000111454 Cep162Q6ZQ06 1403 aa9.59□□□□□ -0.87
Ccr9-201ENSMUST00000111454 AqrQ8CFQ3 1481 aaKnown RBP9.58□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Dnajc5P60904 198 aa9.56□□□□□ -0.88
Ccr9-201ENSMUST00000111454 ClspnQ80YR7 1315 aa9.55□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Arhgap35Q91YM2 1499 aa9.55□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Fgd1P52734 960 aa9.54□□□□□ -0.88
Ccr9-201ENSMUST00000111454 NrdcQ8BHG1 1161 aa9.54□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Tnnt3Q9QZ47 272 aa9.54□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Fgd6Q69ZL1 1399 aa9.54□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Hdac5Q9Z2V6 1113 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms