RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Erich6D3Z6S9 713 aa19.93■□□□□ 0.78
Shank1-202ENSMUST00000107935 Trim30dE9PWL0 497 aa19.91■□□□□ 0.78
Shank1-202ENSMUST00000107935 Plcb2A3KGF7 1181 aa19.89■□□□□ 0.77
Shank1-202ENSMUST00000107935 Ccer2J3QPU5 274 aa19.85■□□□□ 0.77
Shank1-202ENSMUST00000107935 Atp1b4Q99ME6 356 aa19.84■□□□□ 0.77
Shank1-202ENSMUST00000107935 AU015836B2RUM3 263 aa19.82■□□□□ 0.76
Shank1-202ENSMUST00000107935 Arid4bA2CG63 1314 aaKnown RBP19.81■□□□□ 0.76
Shank1-202ENSMUST00000107935 Znf316Q6PGE4 1016 aa19.81■□□□□ 0.76
Shank1-202ENSMUST00000107935 Hdac5Q9Z2V6 1113 aa19.81■□□□□ 0.76
Shank1-202ENSMUST00000107935 Clip1Q922J3 1391 aa19.79■□□□□ 0.76
Shank1-202ENSMUST00000107935 Adam1bQ8R534 806 aa19.79■□□□□ 0.76
Shank1-202ENSMUST00000107935 Gm13697A2AK42 830 aa19.78■□□□□ 0.76
Shank1-202ENSMUST00000107935 Plppr3Q7TPB0 716 aa19.77■□□□□ 0.76
Shank1-202ENSMUST00000107935 Ppm1gQ61074 542 aa19.77■□□□□ 0.76
Shank1-202ENSMUST00000107935 P3h3Q8CG70 732 aa19.72■□□□□ 0.75
Shank1-202ENSMUST00000107935 Aebp2Q9Z248 504 aaKnown RBP19.71■□□□□ 0.75
Shank1-202ENSMUST00000107935 Fgd1P52734 960 aa19.71■□□□□ 0.75
Shank1-202ENSMUST00000107935 Cep164Q5DU05 1446 aa19.71■□□□□ 0.75
Shank1-202ENSMUST00000107935 Spryd3E9Q9B3 442 aa19.71■□□□□ 0.75
Shank1-202ENSMUST00000107935 Dnttip2Q8R2M2 758 aaKnown RBP19.7■□□□□ 0.74
Shank1-202ENSMUST00000107935 Ofd1Q80Z25 1017 aa19.7■□□□□ 0.74
Shank1-202ENSMUST00000107935 SafbD3YXK2 937 aaKnown RBP19.69■□□□□ 0.74
Shank1-202ENSMUST00000107935 Taok2Q6ZQ29 1240 aa19.66■□□□□ 0.74
Shank1-202ENSMUST00000107935 Trim26Q99PN3 545 aa19.65■□□□□ 0.74
Shank1-202ENSMUST00000107935 Erich6bQ9D4S6 220 aa19.59■□□□□ 0.73
Shank1-202ENSMUST00000107935 MsnP26041 577 aaKnown RBP19.56■□□□□ 0.72
Shank1-202ENSMUST00000107935 Npm1Q61937 292 aaKnown RBP19.56■□□□□ 0.72
Shank1-202ENSMUST00000107935 Pknox2Q8BG99 474 aa19.55■□□□□ 0.72
Shank1-202ENSMUST00000107935 Dbr1Q923B1 550 aa19.55■□□□□ 0.72
Shank1-202ENSMUST00000107935 Casc1Q6TDU8 730 aa19.54■□□□□ 0.72
Shank1-202ENSMUST00000107935 Gtf3c3Q3TMP1 882 aa19.54■□□□□ 0.72
Shank1-202ENSMUST00000107935 Rrp12Q6P5B0 1295 aaKnown RBP19.52■□□□□ 0.72
Shank1-202ENSMUST00000107935 Apbb1Q9QXJ1 710 aa19.5■□□□□ 0.71
Shank1-202ENSMUST00000107935 Ipo9Q91YE6 1041 aa19.49■□□□□ 0.71
Shank1-202ENSMUST00000107935 Gm13695A2AK44 830 aa19.48■□□□□ 0.71
Shank1-202ENSMUST00000107935 B4galnt3Q6L8S8 986 aa19.47■□□□□ 0.71
Shank1-202ENSMUST00000107935 Map7O88735 730 aa19.46■□□□□ 0.71
Shank1-202ENSMUST00000107935 Chic2Q9D9G3 165 aa19.45■□□□□ 0.7
Shank1-202ENSMUST00000107935 Mak16Q8BGS0 296 aaKnown RBP19.45■□□□□ 0.7
Shank1-202ENSMUST00000107935 Calcoco2A2A6M5 331 aa19.44■□□□□ 0.7
Shank1-202ENSMUST00000107935 Slc4a3P16283 1227 aa19.41■□□□□ 0.7
Shank1-202ENSMUST00000107935 Fkbp15Q6P9Q6 1216 aaKnown RBP19.4■□□□□ 0.7
Shank1-202ENSMUST00000107935 Tcerg1Q8CGF7 1100 aaKnown RBP19.39■□□□□ 0.7
Shank1-202ENSMUST00000107935 Dnai1Q8C0M8 701 aa19.37■□□□□ 0.69
Shank1-202ENSMUST00000107935 Armcx1Q9CX83 456 aa19.37■□□□□ 0.69
Shank1-202ENSMUST00000107935 PnnO35691 725 aaKnown RBP19.36■□□□□ 0.69
Shank1-202ENSMUST00000107935 Supt16hQ920B9 1047 aa19.36■□□□□ 0.69
Shank1-202ENSMUST00000107935 Mbd3Q9Z2D8 285 aaKnown RBP19.35■□□□□ 0.69
Shank1-202ENSMUST00000107935 SetQ9EQU5 289 aaKnown RBP19.32■□□□□ 0.68
Shank1-202ENSMUST00000107935 PrkcshO08795 521 aa19.31■□□□□ 0.68
Shank1-202ENSMUST00000107935 Map7d2A2AG50 781 aa19.31■□□□□ 0.68
Shank1-202ENSMUST00000107935 Neurod2Q62414 383 aa19.3■□□□□ 0.68
Shank1-202ENSMUST00000107935 BlmO88700 1416 aa19.3■□□□□ 0.68
Shank1-202ENSMUST00000107935 Kiaa0754Q69ZZ9 979 aa19.29■□□□□ 0.68
Shank1-202ENSMUST00000107935 Ddrgk1Q80WW9 315 aa19.27■□□□□ 0.68
Shank1-202ENSMUST00000107935 Znf326O88291 580 aa19.26■□□□□ 0.67
Shank1-202ENSMUST00000107935 Gm973E9Q295 1059 aa19.26■□□□□ 0.67
Shank1-202ENSMUST00000107935 Rgl3Q3UYI5 709 aa19.25■□□□□ 0.67
Shank1-202ENSMUST00000107935 KnstrnQ9D9Z1 312 aaKnown RBP19.25■□□□□ 0.67
Shank1-202ENSMUST00000107935 Pcmtd1P59913 357 aa19.24■□□□□ 0.67
Shank1-202ENSMUST00000107935 Chmp4bQ9D8B3 224 aaKnown RBP19.24■□□□□ 0.67
Shank1-202ENSMUST00000107935 Brd4Q9ESU6 1400 aaKnown RBP19.22■□□□□ 0.67
Shank1-202ENSMUST00000107935 PtmsQ9D0J8 101 aaKnown RBP19.22■□□□□ 0.67
Shank1-202ENSMUST00000107935 Podxl2Q8CAE9 603 aa19.21■□□□□ 0.67
Shank1-202ENSMUST00000107935 Clstn2Q9ER65 966 aa19.21■□□□□ 0.67
Shank1-202ENSMUST00000107935 VgfQ0VGU4 617 aa19.2■□□□□ 0.66
Shank1-202ENSMUST00000107935 RdxP26043 583 aaKnown RBP19.2■□□□□ 0.66
Shank1-202ENSMUST00000107935 4933402E13RikQ9D4D2 429 aa19.2■□□□□ 0.66
Shank1-202ENSMUST00000107935 EspnQ9ET47 871 aa19.2■□□□□ 0.66
Shank1-202ENSMUST00000107935 MccE9PWI3 1003 aa19.19■□□□□ 0.66
Shank1-202ENSMUST00000107935 Rtn4Q99P72 1162 aaKnown RBP19.18■□□□□ 0.66
Shank1-202ENSMUST00000107935 Becn1O88597 448 aa19.17■□□□□ 0.66
Shank1-202ENSMUST00000107935 Cwc22Q8C5N3 908 aaKnown RBP19.17■□□□□ 0.66
Shank1-202ENSMUST00000107935 Rwdd1Q9CQK7 243 aa19.17■□□□□ 0.66
Shank1-202ENSMUST00000107935 Hsp90b1P08113 802 aaKnown RBP19.16■□□□□ 0.66
Shank1-202ENSMUST00000107935 Wwc2Q6NXJ0 1187 aa19.16■□□□□ 0.66
Shank1-202ENSMUST00000107935 Irx6Q9ER75 438 aa19.16■□□□□ 0.66
Shank1-202ENSMUST00000107935 Fbxo2Q80UW2 297 aa19.15■□□□□ 0.66
Shank1-202ENSMUST00000107935 Pes1Q9EQ61 584 aaKnown RBP19.15■□□□□ 0.66
Shank1-202ENSMUST00000107935 Card11Q8CIS0 1159 aa19.15■□□□□ 0.66
Shank1-202ENSMUST00000107935 Trim30aP15533 496 aa19.14■□□□□ 0.65
Shank1-202ENSMUST00000107935 Ipo8Q7TMY7 1010 aa19.14■□□□□ 0.65
Shank1-202ENSMUST00000107935 Mapk8ip3Q9ESN9 1337 aa19.13■□□□□ 0.65
Shank1-202ENSMUST00000107935 SlkO54988 1233 aa19.13■□□□□ 0.65
Shank1-202ENSMUST00000107935 Cald1E9QA15 768 aaKnown RBP19.13■□□□□ 0.65
Shank1-202ENSMUST00000107935 Chmp5Q9D7S9 219 aa19.12■□□□□ 0.65
Shank1-202ENSMUST00000107935 Gm6268A2A3U9 297 aa19.11■□□□□ 0.65
Shank1-202ENSMUST00000107935 Gpatch11Q3UFS4 262 aa19.1■□□□□ 0.65
Shank1-202ENSMUST00000107935 Nolc1E9Q5C9 702 aaKnown RBP19.1■□□□□ 0.65
Shank1-202ENSMUST00000107935 IbspQ61711 324 aa19.08■□□□□ 0.65
Shank1-202ENSMUST00000107935 Ush1cQ9ES64 910 aa19.06■□□□□ 0.64
Shank1-202ENSMUST00000107935 NudcO35685 332 aaKnown RBP19.05■□□□□ 0.64
Shank1-202ENSMUST00000107935 ChgaP26339 463 aaKnown RBP19.05■□□□□ 0.64
Shank1-202ENSMUST00000107935 Grwd1Q810D6 446 aaKnown RBP19.05■□□□□ 0.64
Shank1-202ENSMUST00000107935 Setd5Q5XJV7 1441 aa19.02■□□□□ 0.63
Shank1-202ENSMUST00000107935 Plcd4Q8K3R3 807 aa19■□□□□ 0.63
Shank1-202ENSMUST00000107935 Mfap1aC0HKD8 439 aaKnown RBP19■□□□□ 0.63
Shank1-202ENSMUST00000107935 Mfap1bC0HKD9 439 aaKnown RBP19■□□□□ 0.63
Shank1-202ENSMUST00000107935 Safb2Q80YR5 991 aaKnown RBP18.99■□□□□ 0.63
Shank1-202ENSMUST00000107935 HnrnpuQ8VEK3 800 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms