RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Csrnp3P59055 597 aa13.74□□□□□ -0.21
Scn9a-201ENSMUST00000100063 Clstn1Q9EPL2 979 aa13.73□□□□□ -0.21
Scn9a-201ENSMUST00000100063 Trim26Q99PN3 545 aa13.72□□□□□ -0.21
Scn9a-201ENSMUST00000100063 NgefQ8CHT1 710 aa13.72□□□□□ -0.21
Scn9a-201ENSMUST00000100063 Eif4g2Q62448 906 aaKnown RBP13.7□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Supt5hO55201 1082 aaKnown RBP13.7□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Zfp777B9EKF4 885 aa13.7□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Srpk2O54781 681 aaKnown RBP13.7□□□□□ -0.22
Scn9a-201ENSMUST00000100063 BlmO88700 1416 aa13.69□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Aplp2Q06335 707 aa13.68□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Ppp1r18Q8BQ30 594 aa13.67□□□□□ -0.22
Scn9a-201ENSMUST00000100063 PnnO35691 725 aaKnown RBP13.67□□□□□ -0.22
Scn9a-201ENSMUST00000100063 Kdm2aP59997 1161 aa13.63□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Rb1cc1Q9ESK9 1588 aa13.63□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Iqcf3Q9D498 203 aa13.63□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Vsig10D3YX43 558 aa13.62□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Ccdc18Q640L5 1455 aa13.62□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Rgl3Q3UYI5 709 aa13.61□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Mapk8ip3Q9ESN9 1337 aa13.6□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Arhgap27A2AB59 869 aa13.6□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Gm6268A2A3U9 297 aa13.6□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Pes1Q9EQ61 584 aaKnown RBP13.59□□□□□ -0.23
Scn9a-201ENSMUST00000100063 Rsf1E9PWW9 1441 aaKnown RBP13.58□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Mroh3A0A1D5RM54 893 aa13.58□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Stag3O70576 1240 aa13.57□□□□□ -0.24
Scn9a-201ENSMUST00000100063 MlecQ6ZQI3 291 aaKnown RBP13.57□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Q8BT18 775 aa13.57□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Lmod3E9QA62 571 aa13.56□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Gm20521D3Z5F7 333 aa13.55□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Kif15Q6P9L6 1387 aa13.55□□□□□ -0.24
Scn9a-201ENSMUST00000100063 HdgfP51859 237 aaKnown RBP13.54□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Chmp4bQ9D8B3 224 aaKnown RBP13.53□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Abcc8B2RUS7 1588 aa13.52□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Mrs2Q5NCE8 434 aa13.52□□□□□ -0.24
Scn9a-201ENSMUST00000100063 Setd5Q5XJV7 1441 aa13.52□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Stk24Q99KH8 431 aa13.5□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Hsp90ab1P11499 724 aaKnown RBP13.49□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Cep164Q5DU05 1446 aa13.49□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Ppm1fQ8CGA0 452 aa13.49□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Mtus2Q3UHD3 1353 aa13.48□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Rrp7aQ9D1C9 280 aaKnown RBP13.48□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Dnai2A2AC93 623 aa13.48□□□□□ -0.25
Scn9a-201ENSMUST00000100063 1700019A02RikA0A087WPV9 146 aa13.48□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Trim44Q9QXA7 346 aa13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Sh3bp5Q9Z131 463 aa13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Arid4bA2CG63 1314 aaKnown RBP13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Trim30dE9PWL0 497 aa13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Grwd1Q810D6 446 aaKnown RBP13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Ppp4r2Q0VGB7 417 aa13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Calr4Q3TQS0 420 aa13.47□□□□□ -0.25
Scn9a-201ENSMUST00000100063 Nol10Q5RJG1 687 aaKnown RBP13.46□□□□□ -0.25
Scn9a-201ENSMUST00000100063 PtmaP26350 111 aa13.45□□□□□ -0.26
Scn9a-201ENSMUST00000100063 NudcO35685 332 aaKnown RBP13.44□□□□□ -0.26
Scn9a-201ENSMUST00000100063 Rtf1A2AQ19 715 aaKnown RBP13.4□□□□□ -0.26
Scn9a-201ENSMUST00000100063 Anapc15P60007 132 aa13.39□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Card11Q8CIS0 1159 aa13.39□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Rassf8Q8CJ96 419 aa13.39□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Hsp90b1P08113 802 aaKnown RBP13.38□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Map7O88735 730 aa13.37□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Wdr43Q6ZQL4 677 aaKnown RBP13.36□□□□□ -0.27
Scn9a-201ENSMUST00000100063 Psme1P97371 249 aa13.35□□□□□ -0.27
Scn9a-201ENSMUST00000100063 NacadQ5SWP3 1504 aa13.33□□□□□ -0.27
Scn9a-201ENSMUST00000100063 MccE9PWI3 1003 aa13.33□□□□□ -0.27
Scn9a-201ENSMUST00000100063 AknaQ80VW7 1404 aa13.33□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Cwc22Q8C5N3 908 aaKnown RBP13.32□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Neurod2Q62414 383 aa13.32□□□□□ -0.28
Scn9a-201ENSMUST00000100063 CanxP35564 591 aaKnown RBP13.32□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Noc3lQ8VI84 807 aaKnown RBP13.32□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Cnga1P29974 684 aa13.31□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Casc1Q6TDU8 730 aa13.31□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Apbb1Q9QXJ1 710 aa13.31□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Txndc2Q6P902 515 aa13.31□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Ubap1lG3UW59 384 aa13.3□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Dcaf1Q80TR8 1506 aa13.3□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Ciz1Q8VEH2 845 aa13.3□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Plcb2A3KGF7 1181 aa13.29□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Adam1bQ8R534 806 aa13.29□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Ofd1Q80Z25 1017 aa13.29□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Pde3bQ61409 1100 aa13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Wwc2Q6NXJ0 1187 aa13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Isy1Q69ZQ2 285 aaKnown RBP13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Eea1Q8BL66 1411 aa13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Slc4a1apE9PX68 744 aa13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Sox12Q04890 314 aa13.28□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Arid3cA6PWV5 409 aa13.27□□□□□ -0.28
Scn9a-201ENSMUST00000100063 Sart3Q9JLI8 962 aaKnown RBP13.27□□□□□ -0.28
Scn9a-201ENSMUST00000100063 HnrnpuQ8VEK3 800 aaKnown RBP13.26□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Tpm3-rs7D3Z2H9 248 aa13.26□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Fhad1A6PWD2 1420 aa13.25□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Htatsf1Q8BGC0 757 aa13.24□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Stk26Q99JT2 416 aa13.24□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Rsph4aQ8BYM7 716 aa13.24□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Lemd3Q9WU40 921 aa13.24□□□□□ -0.29
Scn9a-201ENSMUST00000100063 KnstrnQ9D9Z1 312 aaKnown RBP13.23□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Spag9Q58A65 1321 aaKnown RBP13.23□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Gm973E9Q295 1059 aa13.23□□□□□ -0.29
Scn9a-201ENSMUST00000100063 U2surpQ6NV83 1029 aaKnown RBP13.22□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Vps53Q8CCB4 832 aa13.22□□□□□ -0.29
Scn9a-201ENSMUST00000100063 Plin1Q8CGN5 517 aa13.21□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Q3TQI7 289 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms