RNA–Protein interactions for RNA: ENSMUST00000094646.5

Vps4b-201, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,633 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-201ENSMUST00000094646 Kif15Q6P9L6 1387 aa17.38■□□□□ 0.37
Vps4b-201ENSMUST00000094646 Calr4Q3TQS0 420 aa17.37■□□□□ 0.37
Vps4b-201ENSMUST00000094646 Rangap1P46061 589 aaKnown RBP17.37■□□□□ 0.37
Vps4b-201ENSMUST00000094646 Baz1aO88379 1555 aa17.35■□□□□ 0.37
Vps4b-201ENSMUST00000094646 Rsf1E9PWW9 1441 aaKnown RBP17.33■□□□□ 0.36
Vps4b-201ENSMUST00000094646 Ppp4r2Q0VGB7 417 aa17.32■□□□□ 0.36
Vps4b-201ENSMUST00000094646 Rgl3Q3UYI5 709 aa17.31■□□□□ 0.36
Vps4b-201ENSMUST00000094646 Fam71e1A1L3C1 212 aa17.29■□□□□ 0.36
Vps4b-201ENSMUST00000094646 Upf2A2AT37 1269 aaKnown RBP17.27■□□□□ 0.36
Vps4b-201ENSMUST00000094646 ScribQ80U72 1612 aa17.23■□□□□ 0.35
Vps4b-201ENSMUST00000094646 Eea1Q8BL66 1411 aa17.22■□□□□ 0.35
Vps4b-201ENSMUST00000094646 Wdr43Q6ZQL4 677 aaKnown RBP17.2■□□□□ 0.34
Vps4b-201ENSMUST00000094646 SafbD3YXK2 937 aaKnown RBP17.18■□□□□ 0.34
Vps4b-201ENSMUST00000094646 Grwd1Q810D6 446 aaKnown RBP17.16■□□□□ 0.34
Vps4b-201ENSMUST00000094646 P3h3Q8CG70 732 aa17.16■□□□□ 0.34
Vps4b-201ENSMUST00000094646 Safb2Q80YR5 991 aaKnown RBP17.16■□□□□ 0.34
Vps4b-201ENSMUST00000094646 Ccdc18Q640L5 1455 aa17.16■□□□□ 0.34
Vps4b-201ENSMUST00000094646 Arhgap27A2AB59 869 aa17.15■□□□□ 0.34
Vps4b-201ENSMUST00000094646 Kdm2aP59997 1161 aa17.13■□□□□ 0.33
Vps4b-201ENSMUST00000094646 Ercc6F8VPZ5 1481 aa17.1■□□□□ 0.33
Vps4b-201ENSMUST00000094646 Trim26Q99PN3 545 aa17.09■□□□□ 0.33
Vps4b-201ENSMUST00000094646 Kdm5dQ62240 1548 aa17.07■□□□□ 0.32
Vps4b-201ENSMUST00000094646 Mroh3A0A1D5RM54 893 aa17.06■□□□□ 0.32
Vps4b-201ENSMUST00000094646 Ofd1Q80Z25 1017 aa17.05■□□□□ 0.32
Vps4b-201ENSMUST00000094646 Card11Q8CIS0 1159 aa17.03■□□□□ 0.32
Vps4b-201ENSMUST00000094646 Rrp7aQ9D1C9 280 aaKnown RBP17.03■□□□□ 0.32
Vps4b-201ENSMUST00000094646 Fgd1P52734 960 aa17■□□□□ 0.31
Vps4b-201ENSMUST00000094646 Srpk2O54781 681 aaKnown RBP16.99■□□□□ 0.31
Vps4b-201ENSMUST00000094646 Mtus2Q3UHD3 1353 aa16.99■□□□□ 0.31
Vps4b-201ENSMUST00000094646 IqubQ8CDK3 788 aa16.97■□□□□ 0.31
Vps4b-201ENSMUST00000094646 Gm20521D3Z5F7 333 aa16.96■□□□□ 0.31
Vps4b-201ENSMUST00000094646 Cwc22Q8C5N3 908 aaKnown RBP16.95■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Ccdc88bQ4QRL3 1481 aa16.94■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Trim30dE9PWL0 497 aa16.94■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Hspa5P20029 655 aaKnown RBP16.93■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Exosc9Q9JHI7 438 aaKnown RBP16.93■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Bcl11aQ9QYE3 773 aa16.92■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Apbb1Q9QXJ1 710 aa16.91■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Irx6Q9ER75 438 aa16.91■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Mia2Q91ZV0 1396 aa16.9■□□□□ 0.3
Vps4b-201ENSMUST00000094646 CanxP35564 591 aaKnown RBP16.9■□□□□ 0.3
Vps4b-201ENSMUST00000094646 Stk24Q99KH8 431 aa16.89■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Neurod2Q62414 383 aa16.89■□□□□ 0.29
Vps4b-201ENSMUST00000094646 DekQ7TNV0 380 aaKnown RBP16.87■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Vsig10D3YX43 558 aa16.85■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Cep162Q6ZQ06 1403 aa16.85■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Hsp90ab1P11499 724 aaKnown RBP16.85■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Kif27Q7M6Z4 1394 aa16.84■□□□□ 0.29
Vps4b-201ENSMUST00000094646 Wwc2Q6NXJ0 1187 aa16.83■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Mapk8ip3Q9ESN9 1337 aa16.8■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Pkd2O35245 966 aa16.8■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Aebp1Q640N1 1128 aa16.8■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Pds5bQ4VA53 1446 aaKnown RBP16.79■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Stag3O70576 1240 aa16.79■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Map4P27546 1125 aaKnown RBP16.79■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Fmn1Q05860 1466 aa16.78■□□□□ 0.28
Vps4b-201ENSMUST00000094646 Arid4bA2CG63 1314 aaKnown RBP16.77■□□□□ 0.28
Vps4b-201ENSMUST00000094646 NgefQ8CHT1 710 aa16.77■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Cnga1P29974 684 aa16.76■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Hsp90aa1P07901 733 aaKnown RBP16.76■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Gm6268A2A3U9 297 aa16.74■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Crybg2B7ZCC2 1516 aa16.73■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Arid3cA6PWV5 409 aa16.72■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Slc4a3P16283 1227 aa16.72■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Sin3aQ60520 1274 aaKnown RBP16.72■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Cabp1Q9JLK7 227 aa16.72■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Rundc1Q0VDN7 615 aa16.71■□□□□ 0.27
Vps4b-201ENSMUST00000094646 Trak1Q6PD31 939 aa16.71■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Ythdc1E9Q5K9 736 aaKnown RBP16.7■□□□□ 0.26
Vps4b-201ENSMUST00000094646 1700019A02RikA0A087WPV9 146 aa16.7■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Dbr1Q923B1 550 aa16.69■□□□□ 0.26
Vps4b-201ENSMUST00000094646 MyclP10166 368 aa16.69■□□□□ 0.26
Vps4b-201ENSMUST00000094646 AknaQ80VW7 1404 aa16.66■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Rpap1Q80TE0 1409 aa16.65■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Armcx1Q9CX83 456 aa16.65■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Fyco1Q8VDC1 1437 aa16.65■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Ifit1bl1D3Z6F0 470 aa16.65■□□□□ 0.26
Vps4b-201ENSMUST00000094646 Mphosph9A6H5Y1 991 aa16.64■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Ccdc27Q3V036 639 aa16.64■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Trim44Q9QXA7 346 aa16.64■□□□□ 0.25
Vps4b-201ENSMUST00000094646 B4galnt3Q6L8S8 986 aa16.63■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Ccdc9Q8VC31 543 aaKnown RBP16.63■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Iqcf3Q9D498 203 aa16.63■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Sycp2Q9CUU3 1500 aa16.62■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Exoc6Q8R313 802 aa16.62■□□□□ 0.25
Vps4b-201ENSMUST00000094646 NudcO35685 332 aaKnown RBP16.62■□□□□ 0.25
Vps4b-201ENSMUST00000094646 CftrP26361 1476 aa16.61■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Supt16hQ920B9 1047 aa16.61■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Cux2P70298 1426 aa16.61■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Plcb2A3KGF7 1181 aa16.6■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Ppm1gQ61074 542 aa16.6■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Baz1bQ9Z277 1479 aa16.6■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Ppp1r18Q8BQ30 594 aa16.6■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Rtn4Q99P72 1162 aaKnown RBP16.6■□□□□ 0.25
Vps4b-201ENSMUST00000094646 CntlnA2AM05 1397 aa16.59■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Rwdd1Q9CQK7 243 aa16.59■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Stk26Q99JT2 416 aa16.58■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Gtf2e1Q9D0D5 440 aa16.58■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Lemd3Q9WU40 921 aa16.58■□□□□ 0.25
Vps4b-201ENSMUST00000094646 Fhad1A6PWD2 1420 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms