RNA–Protein interactions for RNA: ENSMUST00000092155.11

Col11a1-201, Transcript of Collagen alpha-1(XI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col11a1, Length 7,667 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1-201ENSMUST00000092155 Sall2Q9QX96 1004 aa13.74□□□□□ -0.21
Col11a1-201ENSMUST00000092155 Ccdc27Q3V036 639 aa13.74□□□□□ -0.21
Col11a1-201ENSMUST00000092155 Dcaf1Q80TR8 1506 aa13.7□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Fam71e1A1L3C1 212 aa13.68□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Rad21Q61550 635 aaKnown RBP13.68□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Znf316Q6PGE4 1016 aa13.68□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Trim30dE9PWL0 497 aa13.67□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Fgd1P52734 960 aa13.66□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Bcl11aQ9QYE3 773 aa13.66□□□□□ -0.22
Col11a1-201ENSMUST00000092155 Eid3Q3V124 375 aa13.65□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Clstn1Q9EPL2 979 aa13.64□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Ccer2J3QPU5 274 aa13.63□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Clip1Q922J3 1391 aa13.63□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Plcb2A3KGF7 1181 aa13.63□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Trim26Q99PN3 545 aa13.62□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Cep164Q5DU05 1446 aa13.61□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Brd4Q9ESU6 1400 aaKnown RBP13.6□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Irx3P81067 507 aa13.6□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Arid4bA2CG63 1314 aaKnown RBP13.59□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Znf326O88291 580 aa13.58□□□□□ -0.23
Col11a1-201ENSMUST00000092155 Rtn4Q99P72 1162 aaKnown RBP13.58□□□□□ -0.24
Col11a1-201ENSMUST00000092155 AU015836B2RUM3 263 aa13.57□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Mrs2Q5NCE8 434 aa13.57□□□□□ -0.24
Col11a1-201ENSMUST00000092155 PnnO35691 725 aaKnown RBP13.57□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Abcc8B2RUS7 1588 aa13.56□□□□□ -0.24
Col11a1-201ENSMUST00000092155 P3h3Q8CG70 732 aa13.55□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Ppm1gQ61074 542 aa13.54□□□□□ -0.24
Col11a1-201ENSMUST00000092155 1700123L14RikQ3V2K7 440 aa13.53□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Calcoco2A2A6M5 331 aa13.53□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Casc1Q6TDU8 730 aa13.52□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Mak16Q8BGS0 296 aaKnown RBP13.52□□□□□ -0.24
Col11a1-201ENSMUST00000092155 Safb2Q80YR5 991 aaKnown RBP13.48□□□□□ -0.25
Col11a1-201ENSMUST00000092155 SetQ9EQU5 289 aaKnown RBP13.48□□□□□ -0.25
Col11a1-201ENSMUST00000092155 Ecm2Q5FW85 670 aa13.45□□□□□ -0.26
Col11a1-201ENSMUST00000092155 MsnP26041 577 aaKnown RBP13.45□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Erich6bQ9D4S6 220 aa13.44□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Map7O88735 730 aa13.42□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Dnttip2Q8R2M2 758 aaKnown RBP13.42□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Spryd3E9Q9B3 442 aa13.41□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Gm973E9Q295 1059 aa13.41□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Rb1cc1Q9ESK9 1588 aa13.4□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Ofd1Q80Z25 1017 aa13.4□□□□□ -0.26
Col11a1-201ENSMUST00000092155 Wwc2Q6NXJ0 1187 aa13.36□□□□□ -0.27
Col11a1-201ENSMUST00000092155 Map7d2A2AG50 781 aa13.35□□□□□ -0.27
Col11a1-201ENSMUST00000092155 Chmp4bQ9D8B3 224 aaKnown RBP13.35□□□□□ -0.27
Col11a1-201ENSMUST00000092155 BlmO88700 1416 aa13.35□□□□□ -0.27
Col11a1-201ENSMUST00000092155 Pes1Q9EQ61 584 aaKnown RBP13.34□□□□□ -0.27
Col11a1-201ENSMUST00000092155 Clstn2Q9ER65 966 aa13.33□□□□□ -0.28
Col11a1-201ENSMUST00000092155 Rrp12Q6P5B0 1295 aaKnown RBP13.33□□□□□ -0.28
Col11a1-201ENSMUST00000092155 Chic2Q9D9G3 165 aa13.33□□□□□ -0.28
Col11a1-201ENSMUST00000092155 PtmsQ9D0J8 101 aaKnown RBP13.32□□□□□ -0.28
Col11a1-201ENSMUST00000092155 NgefQ8CHT1 710 aa13.32□□□□□ -0.28
Col11a1-201ENSMUST00000092155 Taok2Q6ZQ29 1240 aa13.31□□□□□ -0.28
Col11a1-201ENSMUST00000092155 MccE9PWI3 1003 aa13.29□□□□□ -0.28
Col11a1-201ENSMUST00000092155 Pcmtd1P59913 357 aa13.29□□□□□ -0.28
Col11a1-201ENSMUST00000092155 RdxP26043 583 aaKnown RBP13.28□□□□□ -0.28
Col11a1-201ENSMUST00000092155 Prm3Q62100 101 aa13.28□□□□□ -0.28
Col11a1-201ENSMUST00000092155 KnstrnQ9D9Z1 312 aaKnown RBP13.27□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Cald1E9QA15 768 aaKnown RBP13.26□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Ubap1lG3UW59 384 aa13.26□□□□□ -0.29
Col11a1-201ENSMUST00000092155 MyclP10166 368 aa13.26□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Apbb1Q9QXJ1 710 aa13.26□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Mbd3Q9Z2D8 285 aaKnown RBP13.25□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Dbr1Q923B1 550 aa13.24□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Kiaa0754Q69ZZ9 979 aa13.24□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Ubl4bQ9CQ84 188 aa13.22□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Podxl2Q8CAE9 603 aa13.22□□□□□ -0.29
Col11a1-201ENSMUST00000092155 Setd5Q5XJV7 1441 aa13.21□□□□□ -0.29
Col11a1-201ENSMUST00000092155 BccipQ9CWI3 316 aa13.2□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Hsp90b1P08113 802 aaKnown RBP13.2□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Ddrgk1Q80WW9 315 aa13.2□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Q8BT18 775 aa13.2□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Slc4a1apE9PX68 744 aa13.19□□□□□ -0.3
Col11a1-201ENSMUST00000092155 B4galnt3Q6L8S8 986 aa13.19□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Dnai1Q8C0M8 701 aa13.19□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Mapk8ip3Q9ESN9 1337 aa13.19□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Ftsj3Q9DBE9 838 aaKnown RBP13.19□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Sh3bp5Q9Z131 463 aa13.18□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Gm6268A2A3U9 297 aa13.18□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Tcerg1Q8CGF7 1100 aaKnown RBP13.17□□□□□ -0.3
Col11a1-201ENSMUST00000092155 4933402E13RikQ9D4D2 429 aa13.17□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Neurod2Q62414 383 aa13.17□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Armcx1Q9CX83 456 aa13.17□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Anapc15P60007 132 aa13.16□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Ipo9Q91YE6 1041 aa13.16□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Becn1O88597 448 aa13.16□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Rgl3Q3UYI5 709 aa13.16□□□□□ -0.3
Col11a1-201ENSMUST00000092155 VgfQ0VGU4 617 aa13.15□□□□□ -0.3
Col11a1-201ENSMUST00000092155 Tpm3-rs7D3Z2H9 248 aa13.15□□□□□ -0.3
Col11a1-201ENSMUST00000092155 IqubQ8CDK3 788 aa13.15□□□□□ -0.3
Col11a1-201ENSMUST00000092155 NudcO35685 332 aaKnown RBP13.14□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Trim30aP15533 496 aa13.14□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Cwc22Q8C5N3 908 aaKnown RBP13.14□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Aebp2Q9Z248 504 aaKnown RBP13.13□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Iqcf3Q9D498 203 aa13.13□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Rwdd1Q9CQK7 243 aa13.12□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Gpatch11Q3UFS4 262 aa13.12□□□□□ -0.31
Col11a1-201ENSMUST00000092155 1700019A02RikA0A087WPV9 146 aa13.11□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Gtf3c3Q3TMP1 882 aa13.11□□□□□ -0.31
Col11a1-201ENSMUST00000092155 Exosc9Q9JHI7 438 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms