RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Npm1Q61937 292 aaKnown RBP11.62□□□□□ -0.55
Polr1a-201ENSMUST00000055296 Plekhg3Q4VAC9 1341 aa11.58□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Hsp90ab1P11499 724 aaKnown RBP11.58□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Safb2Q80YR5 991 aaKnown RBP11.57□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Rtn4Q99P72 1162 aaKnown RBP11.57□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Noc3lQ8VI84 807 aaKnown RBP11.56□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Rb1cc1Q9ESK9 1588 aa11.55□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Mak16Q8BGS0 296 aaKnown RBP11.55□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Calr4Q3TQS0 420 aa11.54□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Fkbp15Q6P9Q6 1216 aaKnown RBP11.53□□□□□ -0.56
Polr1a-201ENSMUST00000055296 P3h3Q8CG70 732 aa11.52□□□□□ -0.56
Polr1a-201ENSMUST00000055296 Trim30dE9PWL0 497 aa11.52□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Plcb2A3KGF7 1181 aa11.51□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Adam1bQ8R534 806 aa11.51□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Aplp2Q06335 707 aa11.5□□□□□ -0.57
Polr1a-201ENSMUST00000055296 CanxP35564 591 aaKnown RBP11.5□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Tnnt2P50752 301 aa11.48□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Pes1Q9EQ61 584 aaKnown RBP11.47□□□□□ -0.57
Polr1a-201ENSMUST00000055296 Eid3Q3V124 375 aa11.45□□□□□ -0.58
Polr1a-201ENSMUST00000055296 Wdr43Q6ZQL4 677 aaKnown RBP11.45□□□□□ -0.58
Polr1a-201ENSMUST00000055296 Casc1Q6TDU8 730 aa11.41□□□□□ -0.58
Polr1a-201ENSMUST00000055296 Anks4bQ8K3X6 423 aa11.41□□□□□ -0.58
Polr1a-201ENSMUST00000055296 SetQ9EQU5 289 aaKnown RBP11.39□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Podxl2Q8CAE9 603 aa11.39□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Isy1Q69ZQ2 285 aaKnown RBP11.38□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Calcoco2A2A6M5 331 aa11.38□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Anapc15P60007 132 aa11.37□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Sh3bp5Q9Z131 463 aa11.36□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Htatsf1Q8BGC0 757 aa11.36□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Brd4Q9ESU6 1400 aaKnown RBP11.35□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Spryd3E9Q9B3 442 aa11.34□□□□□ -0.59
Polr1a-201ENSMUST00000055296 Ercc6F8VPZ5 1481 aa11.33□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Erich6bQ9D4S6 220 aa11.32□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Ubl4bQ9CQ84 188 aa11.31□□□□□ -0.6
Polr1a-201ENSMUST00000055296 NacadQ5SWP3 1504 aa11.31□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Apbb1Q9QXJ1 710 aa11.31□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Mrs2Q5NCE8 434 aa11.3□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Gm6268A2A3U9 297 aa11.3□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Pcmtd1P59913 357 aa11.28□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Rassf8Q8CJ96 419 aa11.28□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Gm973E9Q295 1059 aa11.27□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Hsp90b1P08113 802 aaKnown RBP11.27□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Ftsj3Q9DBE9 838 aaKnown RBP11.27□□□□□ -0.6
Polr1a-201ENSMUST00000055296 Armcx1Q9CX83 456 aa11.26□□□□□ -0.61
Polr1a-201ENSMUST00000055296 MsnP26041 577 aaKnown RBP11.25□□□□□ -0.61
Polr1a-201ENSMUST00000055296 Wwc2Q6NXJ0 1187 aa11.25□□□□□ -0.61
Polr1a-201ENSMUST00000055296 NgefQ8CHT1 710 aa11.25□□□□□ -0.61
Polr1a-201ENSMUST00000055296 1700019A02RikA0A087WPV9 146 aa11.25□□□□□ -0.61
Polr1a-201ENSMUST00000055296 Map7O88735 730 aa11.22□□□□□ -0.61
Polr1a-201ENSMUST00000055296 Tpm3-rs7D3Z2H9 248 aa11.21□□□□□ -0.61
Polr1a-201ENSMUST00000055296 Chic2Q9D9G3 165 aa11.21□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Exosc9Q9JHI7 438 aaKnown RBP11.2□□□□□ -0.62
Polr1a-201ENSMUST00000055296 MccE9PWI3 1003 aa11.2□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Mapk8ip3Q9ESN9 1337 aa11.2□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Arid4aF8VPQ2 1261 aaKnown RBP11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 IqubQ8CDK3 788 aa11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Vps53Q8CCB4 832 aa11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Ccdc27Q3V036 639 aa11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Q8BT18 775 aa11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Mical1Q8VDP3 1048 aa11.19□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Ncbp3Q8BZR9 615 aaKnown RBP11.18□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Neurod2Q62414 383 aa11.18□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Dbr1Q923B1 550 aa11.18□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Dnai2A2AC93 623 aa11.17□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Dnttip2Q8R2M2 758 aaKnown RBP11.17□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Eif4g2Q62448 906 aaKnown RBP11.16□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Cald1E9QA15 768 aaKnown RBP11.16□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Ppm1gQ61074 542 aa11.15□□□□□ -0.62
Polr1a-201ENSMUST00000055296 Dcaf1Q80TR8 1506 aa11.15□□□□□ -0.62
Polr1a-201ENSMUST00000055296 MyclP10166 368 aa11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Ofd1Q80Z25 1017 aa11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Sall2Q9QX96 1004 aa11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Kiaa0754Q69ZZ9 979 aa11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Fam71e1A1L3C1 212 aa11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Chmp4bQ9D8B3 224 aaKnown RBP11.14□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Map7d2A2AG50 781 aa11.13□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Kdm2aP59997 1161 aa11.13□□□□□ -0.63
Polr1a-201ENSMUST00000055296 CgnP59242 1191 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Clstn2Q9ER65 966 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Taok2Q6ZQ29 1240 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 R3hcc1Q8BSI6 488 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Paf1Q8K2T8 535 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Clip1Q922J3 1391 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Gpatch11Q3UFS4 262 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Rgl3Q3UYI5 709 aa11.12□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Ccer2J3QPU5 274 aa11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Iffo2Q8R2V2 512 aa11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 RdxP26043 583 aaKnown RBP11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Ggt6Q6PDE7 497 aa11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Tpm3P21107 285 aaKnown RBP11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Iqcf3Q9D498 203 aa11.11□□□□□ -0.63
Polr1a-201ENSMUST00000055296 B4galnt3Q6L8S8 986 aa11.1□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Baz1aO88379 1555 aa11.09□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Nol10Q5RJG1 687 aaKnown RBP11.09□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Irx3P81067 507 aa11.09□□□□□ -0.63
Polr1a-201ENSMUST00000055296 KnstrnQ9D9Z1 312 aaKnown RBP11.09□□□□□ -0.63
Polr1a-201ENSMUST00000055296 AU015836B2RUM3 263 aa11.08□□□□□ -0.63
Polr1a-201ENSMUST00000055296 Srpk2O54781 681 aaKnown RBP11.07□□□□□ -0.64
Polr1a-201ENSMUST00000055296 CrebrfQ8CDG5 640 aaKnown RBP11.06□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Fam193aQ8CGI1 1231 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms