RNA–Protein interactions for RNA: ENSMUST00000049453.8

Ube3c-201, Transcript of Ubiquitin-protein ligase E3C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3c, Length 5,048 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3c-201ENSMUST00000049453 Trim44Q9QXA7 346 aa22,4■■□□□ 1,18
Ube3c-201ENSMUST00000049453 Rad21Q61550 635 aaKnown RBP22,39■■□□□ 1,18
Ube3c-201ENSMUST00000049453 CanxP35564 591 aaKnown RBP22,39■■□□□ 1,17
Ube3c-201ENSMUST00000049453 Rangap1P46061 589 aaKnown RBP22,34■■□□□ 1,17
Ube3c-201ENSMUST00000049453 Ccdc27Q3V036 639 aa22,32■■□□□ 1,16
Ube3c-201ENSMUST00000049453 Brd4Q9ESU6 1400 aaKnown RBP22,3■■□□□ 1,16
Ube3c-201ENSMUST00000049453 Aebp2Q9Z248 504 aaKnown RBP22,25■■□□□ 1,15
Ube3c-201ENSMUST00000049453 Clstn2Q9ER65 966 aa22,19■■□□□ 1,14
Ube3c-201ENSMUST00000049453 Trim30dE9PWL0 497 aa22,19■■□□□ 1,14
Ube3c-201ENSMUST00000049453 Hsp90ab1P11499 724 aaKnown RBP22,17■■□□□ 1,14
Ube3c-201ENSMUST00000049453 P3h3Q8CG70 732 aa22,17■■□□□ 1,14
Ube3c-201ENSMUST00000049453 Irx3P81067 507 aa22,17■■□□□ 1,14
Ube3c-201ENSMUST00000049453 Plppr3Q7TPB0 716 aa22,17■■□□□ 1,14
Ube3c-201ENSMUST00000049453 Cep164Q5DU05 1446 aa22,14■■□□□ 1,13
Ube3c-201ENSMUST00000049453 Ubl4bQ9CQ84 188 aa22,13■■□□□ 1,13
Ube3c-201ENSMUST00000049453 SafbD3YXK2 937 aaKnown RBP22,11■■□□□ 1,13
Ube3c-201ENSMUST00000049453 Chic2Q9D9G3 165 aa22,11■■□□□ 1,13
Ube3c-201ENSMUST00000049453 Arid4bA2CG63 1314 aaKnown RBP22,07■■□□□ 1,12
Ube3c-201ENSMUST00000049453 PtmaP26350 111 aa22,03■■□□□ 1,12
Ube3c-201ENSMUST00000049453 Htatsf1Q8BGC0 757 aa22,02■■□□□ 1,11
Ube3c-201ENSMUST00000049453 Plcb2A3KGF7 1181 aa22,01■■□□□ 1,11
Ube3c-201ENSMUST00000049453 Ofd1Q80Z25 1017 aa21,99■■□□□ 1,11
Ube3c-201ENSMUST00000049453 BlmO88700 1416 aa21,99■■□□□ 1,11
Ube3c-201ENSMUST00000049453 Fgd1P52734 960 aa21,95■■□□□ 1,1
Ube3c-201ENSMUST00000049453 Spryd3E9Q9B3 442 aa21,94■■□□□ 1,1
Ube3c-201ENSMUST00000049453 Trim26Q99PN3 545 aa21,93■■□□□ 1,1
Ube3c-201ENSMUST00000049453 Safb2Q80YR5 991 aaKnown RBP21,93■■□□□ 1,1
Ube3c-201ENSMUST00000049453 Ppm1gQ61074 542 aa21,89■■□□□ 1,1
Ube3c-201ENSMUST00000049453 AU015836B2RUM3 263 aa21,87■■□□□ 1,09
Ube3c-201ENSMUST00000049453 Apbb1Q9QXJ1 710 aa21,82■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Setd5Q5XJV7 1441 aa21,8■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Dbr1Q923B1 550 aa21,79■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Slc4a3P16283 1227 aa21,79■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Tnnt2P50752 301 aa21,79■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Rgl3Q3UYI5 709 aa21,78■■□□□ 1,08
Ube3c-201ENSMUST00000049453 Rb1cc1Q9ESK9 1588 aa21,75■■□□□ 1,07
Ube3c-201ENSMUST00000049453 Dnttip2Q8R2M2 758 aaKnown RBP21,73■■□□□ 1,07
Ube3c-201ENSMUST00000049453 B4galnt3Q6L8S8 986 aa21,72■■□□□ 1,07
Ube3c-201ENSMUST00000049453 Znf316Q6PGE4 1016 aa21,71■■□□□ 1,07
Ube3c-201ENSMUST00000049453 Taok2Q6ZQ29 1240 aa21,69■■□□□ 1,06
Ube3c-201ENSMUST00000049453 IqubQ8CDK3 788 aa21,67■■□□□ 1,06
Ube3c-201ENSMUST00000049453 Supt16hQ920B9 1047 aa21,63■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Tcerg1Q8CGF7 1100 aaKnown RBP21,61■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Erich6bQ9D4S6 220 aa21,61■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Kdm2aP59997 1161 aa21,61■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Casc1Q6TDU8 730 aa21,6■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Neurod2Q62414 383 aa21,6■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Srpk2O54781 681 aaKnown RBP21,58■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Mroh3A0A1D5RM54 893 aa21,58■■□□□ 1,05
Ube3c-201ENSMUST00000049453 Adam1bQ8R534 806 aa21,58■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Armcx1Q9CX83 456 aa21,57■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Irx6Q9ER75 438 aa21,56■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Grwd1Q810D6 446 aaKnown RBP21,56■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Znf326O88291 580 aa21,55■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Cwc22Q8C5N3 908 aaKnown RBP21,55■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Exosc9Q9JHI7 438 aaKnown RBP21,55■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Card11Q8CIS0 1159 aa21,52■■□□□ 1,04
Ube3c-201ENSMUST00000049453 Dnai1Q8C0M8 701 aa21,52■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Gtf3c3Q3TMP1 882 aa21,51■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Mapk8ip3Q9ESN9 1337 aa21,51■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Gm20521D3Z5F7 333 aa21,5■■□□□ 1,03
Ube3c-201ENSMUST00000049453 MsnP26041 577 aaKnown RBP21,5■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Zfp777B9EKF4 885 aa21,49■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Wwc2Q6NXJ0 1187 aa21,48■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Chmp4bQ9D8B3 224 aaKnown RBP21,48■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Rsf1E9PWW9 1441 aaKnown RBP21,47■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Ipo9Q91YE6 1041 aa21,47■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Map7O88735 730 aa21,47■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Kif15Q6P9L6 1387 aa21,47■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Chmp5Q9D7S9 219 aa21,47■■□□□ 1,03
Ube3c-201ENSMUST00000049453 NacadQ5SWP3 1504 aa21,46■■□□□ 1,03
Ube3c-201ENSMUST00000049453 Eea1Q8BL66 1411 aa21,44■■□□□ 1,02
Ube3c-201ENSMUST00000049453 PrkcshO08795 521 aa21,43■■□□□ 1,02
Ube3c-201ENSMUST00000049453 Iqcf3Q9D498 203 aa21,41■■□□□ 1,02
Ube3c-201ENSMUST00000049453 Arhgap27A2AB59 869 aa21,4■■□□□ 1,02
Ube3c-201ENSMUST00000049453 Pknox2Q8BG99 474 aa21,39■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Rrp12Q6P5B0 1295 aaKnown RBP21,38■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Rrp7aQ9D1C9 280 aaKnown RBP21,38■■□□□ 1,01
Ube3c-201ENSMUST00000049453 NudcO35685 332 aaKnown RBP21,37■■□□□ 1,01
Ube3c-201ENSMUST00000049453 PnnO35691 725 aaKnown RBP21,36■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Gm6268A2A3U9 297 aa21,35■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Rwdd1Q9CQK7 243 aa21,35■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Mtus2Q3UHD3 1353 aa21,34■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Golga3P55937 1487 aa21,33■■□□□ 1,01
Ube3c-201ENSMUST00000049453 Baz1aO88379 1555 aa21,33■■□□□ 1
Ube3c-201ENSMUST00000049453 Mbd3Q9Z2D8 285 aaKnown RBP21,33■■□□□ 1
Ube3c-201ENSMUST00000049453 Ccdc18Q640L5 1455 aa21,31■■□□□ 1
Ube3c-201ENSMUST00000049453 Nolc1E9Q5C9 702 aaKnown RBP21,3■■□□□ 1
Ube3c-201ENSMUST00000049453 Pes1Q9EQ61 584 aaKnown RBP21,3■■□□□ 1
Ube3c-201ENSMUST00000049453 Stag3O70576 1240 aa21,3■■□□□ 1
Ube3c-201ENSMUST00000049453 KnstrnQ9D9Z1 312 aaKnown RBP21,3■■□□□ 1
Ube3c-201ENSMUST00000049453 EspnQ9ET47 871 aa21,29■■□□□ 1
Ube3c-201ENSMUST00000049453 Kdm5dQ62240 1548 aa21,29■■□□□ 1
Ube3c-201ENSMUST00000049453 Hsp90b1P08113 802 aaKnown RBP21,29■■□□□ 1
Ube3c-201ENSMUST00000049453 Rtn4Q99P72 1162 aaKnown RBP21,28■■□□□ 1
Ube3c-201ENSMUST00000049453 Stk24Q99KH8 431 aa21,28■■□□□ 1
Ube3c-201ENSMUST00000049453 Calcoco2A2A6M5 331 aa21,27■■□□□ 1
Ube3c-201ENSMUST00000049453 Pcmtd1P59913 357 aa21,27■□□□□ 0,99
Ube3c-201ENSMUST00000049453 NgefQ8CHT1 710 aa21,26■□□□□ 0,99
Ube3c-201ENSMUST00000049453 ChgaP26339 463 aaKnown RBP21,26■□□□□ 0,99
Retrieved 100 of 22,080 RNA–protein pairs in 14,8 ms