RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 Zbtb7cQ8VCZ7 619 aa20.2■□□□□ 0.82
Ctdp1-201ENSMUST00000036229 Cecr2E9Q2Z1 1453 aa20.18■□□□□ 0.82
Ctdp1-201ENSMUST00000036229 Golga3P55937 1487 aa20.18■□□□□ 0.82
Ctdp1-201ENSMUST00000036229 Clip1Q922J3 1391 aa20.12■□□□□ 0.81
Ctdp1-201ENSMUST00000036229 Mrs2Q5NCE8 434 aa20.1■□□□□ 0.81
Ctdp1-201ENSMUST00000036229 Zbtb4Q5F293 982 aa20.09■□□□□ 0.81
Ctdp1-201ENSMUST00000036229 Taok2Q6ZQ29 1240 aa20.08■□□□□ 0.81
Ctdp1-201ENSMUST00000036229 ArxO35085 564 aa20.06■□□□□ 0.8
Ctdp1-201ENSMUST00000036229 BicraF8VPZ9 1578 aa20.06■□□□□ 0.8
Ctdp1-201ENSMUST00000036229 Lmod2Q3UHZ5 550 aa20.05■□□□□ 0.8
Ctdp1-201ENSMUST00000036229 Sin3aQ60520 1274 aaKnown RBP20.04■□□□□ 0.8
Ctdp1-201ENSMUST00000036229 Ccer2J3QPU5 274 aa19.96■□□□□ 0.79
Ctdp1-201ENSMUST00000036229 ChgaP26339 463 aaKnown RBP19.96■□□□□ 0.79
Ctdp1-201ENSMUST00000036229 Fgd1P52734 960 aa19.94■□□□□ 0.78
Ctdp1-201ENSMUST00000036229 Rtn4Q99P72 1162 aaKnown RBP19.94■□□□□ 0.78
Ctdp1-201ENSMUST00000036229 Synj1Q8CHC4 1574 aa19.94■□□□□ 0.78
Ctdp1-201ENSMUST00000036229 Znf692Q3U381 531 aa19.91■□□□□ 0.78
Ctdp1-201ENSMUST00000036229 Wwc2Q6NXJ0 1187 aa19.88■□□□□ 0.77
Ctdp1-201ENSMUST00000036229 Hspa5P20029 655 aaKnown RBP19.87■□□□□ 0.77
Ctdp1-201ENSMUST00000036229 NeflP08551 543 aa19.86■□□□□ 0.77
Ctdp1-201ENSMUST00000036229 Ccdc9Q8VC31 543 aaKnown RBP19.84■□□□□ 0.77
Ctdp1-201ENSMUST00000036229 CftrP26361 1476 aa19.84■□□□□ 0.77
Ctdp1-201ENSMUST00000036229 CanxP35564 591 aaKnown RBP19.81■□□□□ 0.76
Ctdp1-201ENSMUST00000036229 Ipo9Q91YE6 1041 aa19.79■□□□□ 0.76
Ctdp1-201ENSMUST00000036229 Kcnh8P59111 1102 aa19.77■□□□□ 0.76
Ctdp1-201ENSMUST00000036229 Spryd3E9Q9B3 442 aa19.77■□□□□ 0.75
Ctdp1-201ENSMUST00000036229 Rpap1Q80TE0 1409 aa19.73■□□□□ 0.75
Ctdp1-201ENSMUST00000036229 B4galnt3Q6L8S8 986 aa19.71■□□□□ 0.75
Ctdp1-201ENSMUST00000036229 Liat1Q810M6 228 aa19.71■□□□□ 0.75
Ctdp1-201ENSMUST00000036229 Rad21Q61550 635 aaKnown RBP19.71■□□□□ 0.75
Ctdp1-201ENSMUST00000036229 Ofd1Q80Z25 1017 aa19.69■□□□□ 0.74
Ctdp1-201ENSMUST00000036229 Dbr1Q923B1 550 aa19.69■□□□□ 0.74
Ctdp1-201ENSMUST00000036229 Arhgap27A2AB59 869 aa19.65■□□□□ 0.74
Ctdp1-201ENSMUST00000036229 Ipo4Q8VI75 1082 aa19.64■□□□□ 0.74
Ctdp1-201ENSMUST00000036229 Tcerg1Q8CGF7 1100 aaKnown RBP19.63■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Anp32bQ9EST5 272 aaKnown RBP19.62■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Smarca4Q3TKT4 1613 aaKnown RBP19.62■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Exoc6Q8R313 802 aa19.61■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Washc2Q6PGL7 1334 aa19.6■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 IbspQ61711 324 aa19.6■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Chic2Q9D9G3 165 aa19.6■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Gm13697A2AK42 830 aa19.59■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Egfem1Q8C088 590 aa19.59■□□□□ 0.73
Ctdp1-201ENSMUST00000036229 Iqcf3Q9D498 203 aa19.56■□□□□ 0.72
Ctdp1-201ENSMUST00000036229 Cttnbp2B9EJA2 1648 aa19.56■□□□□ 0.72
Ctdp1-201ENSMUST00000036229 Cep162Q6ZQ06 1403 aa19.56■□□□□ 0.72
Ctdp1-201ENSMUST00000036229 BlmO88700 1416 aa19.53■□□□□ 0.72
Ctdp1-201ENSMUST00000036229 Fmn1Q05860 1466 aa19.51■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Smg6P61406 1418 aaKnown RBP19.51■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Cc2d2aQ8CFW7 1633 aa19.5■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Rapgef2Q8CHG7 1496 aa19.5■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Ythdc1E9Q5K9 736 aaKnown RBP19.49■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Sart3Q9JLI8 962 aaKnown RBP19.48■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Apbb1Q9QXJ1 710 aa19.46■□□□□ 0.71
Ctdp1-201ENSMUST00000036229 Zfp777B9EKF4 885 aa19.45■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Slc4a2P13808 1237 aaKnown RBP19.43■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Setd5Q5XJV7 1441 aa19.43■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Iqgap2Q3UQ44 1575 aa19.42■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Vsig10D3YX43 558 aa19.42■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Trim30dE9PWL0 497 aa19.41■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Dnttip2Q8R2M2 758 aaKnown RBP19.4■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 Arid4bA2CG63 1314 aaKnown RBP19.4■□□□□ 0.7
Ctdp1-201ENSMUST00000036229 4930567H17RikQ3V0K5 233 aa19.39■□□□□ 0.69
Ctdp1-201ENSMUST00000036229 AU015836B2RUM3 263 aa19.38■□□□□ 0.69
Ctdp1-201ENSMUST00000036229 Ncapd3Q6ZQK0 1506 aa19.38■□□□□ 0.69
Ctdp1-201ENSMUST00000036229 Top2bQ64511 1612 aa19.37■□□□□ 0.69
Ctdp1-201ENSMUST00000036229 Atad2bE9Q166 1460 aaKnown RBP19.35■□□□□ 0.69
Ctdp1-201ENSMUST00000036229 Lmod3E9QA62 571 aa19.33■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Pds5bQ4VA53 1446 aaKnown RBP19.32■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Baz1bQ9Z277 1479 aa19.32■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Dnai1Q8C0M8 701 aa19.32■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Hsp90ab1P11499 724 aaKnown RBP19.31■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Kif15Q6P9L6 1387 aa19.3■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 AampJ3QN89 436 aa19.28■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Prdm10Q3UTQ7 1184 aa19.28■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Eea1Q8BL66 1411 aa19.28■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Armcx1Q9CX83 456 aa19.27■□□□□ 0.68
Ctdp1-201ENSMUST00000036229 Npm1Q61937 292 aaKnown RBP19.26■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 Top2aQ01320 1528 aaKnown RBP19.25■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 Pdcl3Q8BVF2 240 aa19.25■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 Rangap1P46061 589 aaKnown RBP19.22■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 L3mbtl2P59178 703 aa19.22■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 Gm6268A2A3U9 297 aa19.21■□□□□ 0.67
Ctdp1-201ENSMUST00000036229 Polr3glQ8R0C0 218 aa19.2■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Chmp5Q9D7S9 219 aa19.2■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Eif2s2Q99L45 331 aaKnown RBP19.18■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Rgl3Q3UYI5 709 aa19.18■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Ttll13A4Q9F6 804 aa19.17■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 DekQ7TNV0 380 aaKnown RBP19.16■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Mroh3A0A1D5RM54 893 aa19.15■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Gm13695A2AK44 830 aa19.15■□□□□ 0.66
Ctdp1-201ENSMUST00000036229 Ppm1gQ61074 542 aa19.14■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Grwd1Q810D6 446 aaKnown RBP19.12■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 DmtnQ9WV69 405 aa19.12■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Trim44Q9QXA7 346 aa19.1■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Ubl4bQ9CQ84 188 aa19.09■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Ercc6F8VPZ5 1481 aa19.09■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Plcb2A3KGF7 1181 aa19.09■□□□□ 0.65
Ctdp1-201ENSMUST00000036229 Frmpd1A2AKB4 1549 aa19.08■□□□□ 0.64
Ctdp1-201ENSMUST00000036229 Chrna2Q91X60 512 aa19.08■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 72.2 ms