RNA–Protein interactions for RNA: ENSMUST00000034065.13

Nek1-201, Transcript of Serine/threonine-protein kinase Nek1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Nek1, Length 5,401 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1-201ENSMUST00000034065 Ubl4bQ9CQ84 188 aa17.43■□□□□ 0.38
Nek1-201ENSMUST00000034065 DekQ7TNV0 380 aaKnown RBP17.42■□□□□ 0.38
Nek1-201ENSMUST00000034065 Plppr3Q7TPB0 716 aa17.4■□□□□ 0.38
Nek1-201ENSMUST00000034065 Fgd1P52734 960 aa17.39■□□□□ 0.37
Nek1-201ENSMUST00000034065 CanxP35564 591 aaKnown RBP17.35■□□□□ 0.37
Nek1-201ENSMUST00000034065 Vsig10D3YX43 558 aa17.34■□□□□ 0.37
Nek1-201ENSMUST00000034065 Ythdc1E9Q5K9 736 aaKnown RBP17.34■□□□□ 0.37
Nek1-201ENSMUST00000034065 Setd5Q5XJV7 1441 aa17.32■□□□□ 0.36
Nek1-201ENSMUST00000034065 Lmod3E9QA62 571 aa17.32■□□□□ 0.36
Nek1-201ENSMUST00000034065 Trim44Q9QXA7 346 aa17.32■□□□□ 0.36
Nek1-201ENSMUST00000034065 Hsp90ab1P11499 724 aaKnown RBP17.32■□□□□ 0.36
Nek1-201ENSMUST00000034065 Trim30dE9PWL0 497 aa17.31■□□□□ 0.36
Nek1-201ENSMUST00000034065 Trim26Q99PN3 545 aa17.31■□□□□ 0.36
Nek1-201ENSMUST00000034065 Rgl3Q3UYI5 709 aa17.31■□□□□ 0.36
Nek1-201ENSMUST00000034065 Ofd1Q80Z25 1017 aa17.28■□□□□ 0.36
Nek1-201ENSMUST00000034065 Aebp2Q9Z248 504 aaKnown RBP17.25■□□□□ 0.35
Nek1-201ENSMUST00000034065 1700123L14RikQ3V2K7 440 aa17.22■□□□□ 0.35
Nek1-201ENSMUST00000034065 Rb1cc1Q9ESK9 1588 aa17.21■□□□□ 0.35
Nek1-201ENSMUST00000034065 Fam71e1A1L3C1 212 aa17.21■□□□□ 0.35
Nek1-201ENSMUST00000034065 P3h3Q8CG70 732 aa17.21■□□□□ 0.35
Nek1-201ENSMUST00000034065 Safb2Q80YR5 991 aaKnown RBP17.2■□□□□ 0.34
Nek1-201ENSMUST00000034065 Htatsf1Q8BGC0 757 aa17.14■□□□□ 0.34
Nek1-201ENSMUST00000034065 PtmaP26350 111 aa17.14■□□□□ 0.33
Nek1-201ENSMUST00000034065 Grwd1Q810D6 446 aaKnown RBP17.14■□□□□ 0.33
Nek1-201ENSMUST00000034065 Arid4bA2CG63 1314 aaKnown RBP17.13■□□□□ 0.33
Nek1-201ENSMUST00000034065 IqubQ8CDK3 788 aa17.13■□□□□ 0.33
Nek1-201ENSMUST00000034065 Kdm2aP59997 1161 aa17.12■□□□□ 0.33
Nek1-201ENSMUST00000034065 Cwc22Q8C5N3 908 aaKnown RBP17.12■□□□□ 0.33
Nek1-201ENSMUST00000034065 Card11Q8CIS0 1159 aa17.11■□□□□ 0.33
Nek1-201ENSMUST00000034065 Ccdc27Q3V036 639 aa17.11■□□□□ 0.33
Nek1-201ENSMUST00000034065 Plcb2A3KGF7 1181 aa17.11■□□□□ 0.33
Nek1-201ENSMUST00000034065 Apbb1Q9QXJ1 710 aa17.11■□□□□ 0.33
Nek1-201ENSMUST00000034065 Irx6Q9ER75 438 aa17.09■□□□□ 0.33
Nek1-201ENSMUST00000034065 Ppm1gQ61074 542 aa17.09■□□□□ 0.33
Nek1-201ENSMUST00000034065 Mroh3A0A1D5RM54 893 aa17.08■□□□□ 0.32
Nek1-201ENSMUST00000034065 Srpk2O54781 681 aaKnown RBP17.08■□□□□ 0.32
Nek1-201ENSMUST00000034065 Eea1Q8BL66 1411 aa17.06■□□□□ 0.32
Nek1-201ENSMUST00000034065 Neurod2Q62414 383 aa17.06■□□□□ 0.32
Nek1-201ENSMUST00000034065 Mapk8ip3Q9ESN9 1337 aa17.04■□□□□ 0.32
Nek1-201ENSMUST00000034065 Exosc9Q9JHI7 438 aaKnown RBP17.04■□□□□ 0.32
Nek1-201ENSMUST00000034065 Gm20521D3Z5F7 333 aa17.03■□□□□ 0.32
Nek1-201ENSMUST00000034065 Golga3P55937 1487 aa17.02■□□□□ 0.31
Nek1-201ENSMUST00000034065 Chmp4bQ9D8B3 224 aaKnown RBP17■□□□□ 0.31
Nek1-201ENSMUST00000034065 Kif15Q6P9L6 1387 aa16.99■□□□□ 0.31
Nek1-201ENSMUST00000034065 Rsf1E9PWW9 1441 aaKnown RBP16.99■□□□□ 0.31
Nek1-201ENSMUST00000034065 Map7O88735 730 aa16.98■□□□□ 0.31
Nek1-201ENSMUST00000034065 Znf326O88291 580 aa16.97■□□□□ 0.31
Nek1-201ENSMUST00000034065 Dbr1Q923B1 550 aa16.97■□□□□ 0.31
Nek1-201ENSMUST00000034065 Gm6268A2A3U9 297 aa16.95■□□□□ 0.3
Nek1-201ENSMUST00000034065 NudcO35685 332 aaKnown RBP16.93■□□□□ 0.3
Nek1-201ENSMUST00000034065 Arhgap27A2AB59 869 aa16.93■□□□□ 0.3
Nek1-201ENSMUST00000034065 Rrp7aQ9D1C9 280 aaKnown RBP16.93■□□□□ 0.3
Nek1-201ENSMUST00000034065 Mtus2Q3UHD3 1353 aa16.92■□□□□ 0.3
Nek1-201ENSMUST00000034065 Iqcf3Q9D498 203 aa16.91■□□□□ 0.3
Nek1-201ENSMUST00000034065 Casc1Q6TDU8 730 aa16.91■□□□□ 0.3
Nek1-201ENSMUST00000034065 Mia2Q91ZV0 1396 aa16.9■□□□□ 0.3
Nek1-201ENSMUST00000034065 B4galnt3Q6L8S8 986 aa16.9■□□□□ 0.3
Nek1-201ENSMUST00000034065 Armcx1Q9CX83 456 aa16.9■□□□□ 0.3
Nek1-201ENSMUST00000034065 PnnO35691 725 aaKnown RBP16.89■□□□□ 0.29
Nek1-201ENSMUST00000034065 Ccdc18Q640L5 1455 aa16.88■□□□□ 0.29
Nek1-201ENSMUST00000034065 Zfp777B9EKF4 885 aa16.88■□□□□ 0.29
Nek1-201ENSMUST00000034065 Mbd3Q9Z2D8 285 aaKnown RBP16.88■□□□□ 0.29
Nek1-201ENSMUST00000034065 Stag3O70576 1240 aa16.88■□□□□ 0.29
Nek1-201ENSMUST00000034065 SafbD3YXK2 937 aaKnown RBP16.86■□□□□ 0.29
Nek1-201ENSMUST00000034065 Stk24Q99KH8 431 aa16.86■□□□□ 0.29
Nek1-201ENSMUST00000034065 Pes1Q9EQ61 584 aaKnown RBP16.86■□□□□ 0.29
Nek1-201ENSMUST00000034065 Wwc2Q6NXJ0 1187 aa16.85■□□□□ 0.29
Nek1-201ENSMUST00000034065 Rwdd1Q9CQK7 243 aa16.85■□□□□ 0.29
Nek1-201ENSMUST00000034065 Spryd3E9Q9B3 442 aa16.85■□□□□ 0.29
Nek1-201ENSMUST00000034065 KnstrnQ9D9Z1 312 aaKnown RBP16.84■□□□□ 0.29
Nek1-201ENSMUST00000034065 1700019A02RikA0A087WPV9 146 aa16.84■□□□□ 0.29
Nek1-201ENSMUST00000034065 Hsp90b1P08113 802 aaKnown RBP16.84■□□□□ 0.29
Nek1-201ENSMUST00000034065 NacadQ5SWP3 1504 aa16.83■□□□□ 0.29
Nek1-201ENSMUST00000034065 Adam1bQ8R534 806 aa16.83■□□□□ 0.29
Nek1-201ENSMUST00000034065 Hspa5P20029 655 aaKnown RBP16.82■□□□□ 0.28
Nek1-201ENSMUST00000034065 Irx3P81067 507 aa16.82■□□□□ 0.28
Nek1-201ENSMUST00000034065 Rtn4Q99P72 1162 aaKnown RBP16.82■□□□□ 0.28
Nek1-201ENSMUST00000034065 Tcerg1Q8CGF7 1100 aaKnown RBP16.82■□□□□ 0.28
Nek1-201ENSMUST00000034065 NgefQ8CHT1 710 aa16.81■□□□□ 0.28
Nek1-201ENSMUST00000034065 Slc4a3P16283 1227 aa16.8■□□□□ 0.28
Nek1-201ENSMUST00000034065 Cnga1P29974 684 aa16.78■□□□□ 0.28
Nek1-201ENSMUST00000034065 MccE9PWI3 1003 aa16.77■□□□□ 0.28
Nek1-201ENSMUST00000034065 Baz1aO88379 1555 aa16.77■□□□□ 0.27
Nek1-201ENSMUST00000034065 Supt16hQ920B9 1047 aa16.76■□□□□ 0.27
Nek1-201ENSMUST00000034065 Chmp5Q9D7S9 219 aa16.76■□□□□ 0.27
Nek1-201ENSMUST00000034065 HnrnpuQ8VEK3 800 aaKnown RBP16.76■□□□□ 0.27
Nek1-201ENSMUST00000034065 AU015836B2RUM3 263 aa16.75■□□□□ 0.27
Nek1-201ENSMUST00000034065 Rundc1Q0VDN7 615 aa16.72■□□□□ 0.27
Nek1-201ENSMUST00000034065 Bcl11aQ9QYE3 773 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Ercc6F8VPZ5 1481 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Pkd2O35245 966 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Speer4f1Q9D5Q6 258 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Clstn1Q9EPL2 979 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Dnai1Q8C0M8 701 aa16.71■□□□□ 0.27
Nek1-201ENSMUST00000034065 Dnttip2Q8R2M2 758 aaKnown RBP16.71■□□□□ 0.26
Nek1-201ENSMUST00000034065 Fhad1A6PWD2 1420 aa16.7■□□□□ 0.26
Nek1-201ENSMUST00000034065 Map4P27546 1125 aaKnown RBP16.7■□□□□ 0.26
Nek1-201ENSMUST00000034065 PtmsQ9D0J8 101 aaKnown RBP16.7■□□□□ 0.26
Nek1-201ENSMUST00000034065 Sh3bp5Q9Z131 463 aa16.69■□□□□ 0.26
Nek1-201ENSMUST00000034065 Erich6bQ9D4S6 220 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms