RNA–Protein interactions for RNA: ENSMUST00000028607.12

Caprin1-201, Transcript of Caprin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Caprin1, Length 6,169 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Caprin1-201ENSMUST00000028607 Ccdc9Q8VC31 543 aaKnown RBP17.64■□□□□ 0.41
Caprin1-201ENSMUST00000028607 Fgd1P52734 960 aa17.63■□□□□ 0.41
Caprin1-201ENSMUST00000028607 Trim44Q9QXA7 346 aa17.61■□□□□ 0.41
Caprin1-201ENSMUST00000028607 Plppr3Q7TPB0 716 aa17.6■□□□□ 0.41
Caprin1-201ENSMUST00000028607 Hsp90ab1P11499 724 aaKnown RBP17.56■□□□□ 0.4
Caprin1-201ENSMUST00000028607 Clstn2Q9ER65 966 aa17.54■□□□□ 0.4
Caprin1-201ENSMUST00000028607 Trim26Q99PN3 545 aa17.54■□□□□ 0.4
Caprin1-201ENSMUST00000028607 CanxP35564 591 aaKnown RBP17.53■□□□□ 0.4
Caprin1-201ENSMUST00000028607 BlmO88700 1416 aa17.52■□□□□ 0.4
Caprin1-201ENSMUST00000028607 Trim30dE9PWL0 497 aa17.48■□□□□ 0.39
Caprin1-201ENSMUST00000028607 Abcc8B2RUS7 1588 aa17.47■□□□□ 0.39
Caprin1-201ENSMUST00000028607 PtmaP26350 111 aa17.46■□□□□ 0.39
Caprin1-201ENSMUST00000028607 Ubl4bQ9CQ84 188 aa17.42■□□□□ 0.38
Caprin1-201ENSMUST00000028607 Fam71e1A1L3C1 212 aa17.39■□□□□ 0.38
Caprin1-201ENSMUST00000028607 Ofd1Q80Z25 1017 aa17.39■□□□□ 0.38
Caprin1-201ENSMUST00000028607 Safb2Q80YR5 991 aaKnown RBP17.39■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Arid4bA2CG63 1314 aaKnown RBP17.39■□□□□ 0.37
Caprin1-201ENSMUST00000028607 P3h3Q8CG70 732 aa17.39■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Rgl3Q3UYI5 709 aa17.38■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Plcb2A3KGF7 1181 aa17.35■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Htatsf1Q8BGC0 757 aa17.34■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Rb1cc1Q9ESK9 1588 aa17.34■□□□□ 0.37
Caprin1-201ENSMUST00000028607 Irx6Q9ER75 438 aa17.33■□□□□ 0.36
Caprin1-201ENSMUST00000028607 Setd5Q5XJV7 1441 aa17.32■□□□□ 0.36
Caprin1-201ENSMUST00000028607 Ccdc27Q3V036 639 aa17.3■□□□□ 0.36
Caprin1-201ENSMUST00000028607 1700123L14RikQ3V2K7 440 aa17.28■□□□□ 0.36
Caprin1-201ENSMUST00000028607 IqubQ8CDK3 788 aa17.28■□□□□ 0.36
Caprin1-201ENSMUST00000028607 Znf326O88291 580 aa17.28■□□□□ 0.36
Caprin1-201ENSMUST00000028607 Apbb1Q9QXJ1 710 aa17.28■□□□□ 0.36
Caprin1-201ENSMUST00000028607 Aebp2Q9Z248 504 aaKnown RBP17.26■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Ppm1gQ61074 542 aa17.23■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Card11Q8CIS0 1159 aa17.22■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Kdm2aP59997 1161 aa17.21■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Neurod2Q62414 383 aa17.21■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Grwd1Q810D6 446 aaKnown RBP17.21■□□□□ 0.35
Caprin1-201ENSMUST00000028607 Srpk2O54781 681 aaKnown RBP17.21■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Mapk8ip3Q9ESN9 1337 aa17.2■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Map7O88735 730 aa17.19■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Cwc22Q8C5N3 908 aaKnown RBP17.17■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Exosc9Q9JHI7 438 aaKnown RBP17.17■□□□□ 0.34
Caprin1-201ENSMUST00000028607 PnnO35691 725 aaKnown RBP17.16■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Dbr1Q923B1 550 aa17.16■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Chmp4bQ9D8B3 224 aaKnown RBP17.15■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Adam1bQ8R534 806 aa17.15■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Gm20521D3Z5F7 333 aa17.15■□□□□ 0.34
Caprin1-201ENSMUST00000028607 Mroh3A0A1D5RM54 893 aa17.14■□□□□ 0.33
Caprin1-201ENSMUST00000028607 Casc1Q6TDU8 730 aa17.14■□□□□ 0.33
Caprin1-201ENSMUST00000028607 Armcx1Q9CX83 456 aa17.12■□□□□ 0.33
Caprin1-201ENSMUST00000028607 Gm6268A2A3U9 297 aa17.12■□□□□ 0.33
Caprin1-201ENSMUST00000028607 Spryd3E9Q9B3 442 aa17.09■□□□□ 0.33
Caprin1-201ENSMUST00000028607 Pes1Q9EQ61 584 aaKnown RBP17.08■□□□□ 0.33
Caprin1-201ENSMUST00000028607 NudcO35685 332 aaKnown RBP17.07■□□□□ 0.32
Caprin1-201ENSMUST00000028607 B4galnt3Q6L8S8 986 aa17.07■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Eea1Q8BL66 1411 aa17.07■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Iqcf3Q9D498 203 aa17.06■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Rtn4Q99P72 1162 aaKnown RBP17.05■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Hsp90b1P08113 802 aaKnown RBP17.04■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Stag3O70576 1240 aa17.03■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Mbd3Q9Z2D8 285 aaKnown RBP17.03■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Clstn1Q9EPL2 979 aa17.03■□□□□ 0.32
Caprin1-201ENSMUST00000028607 KnstrnQ9D9Z1 312 aaKnown RBP17.02■□□□□ 0.32
Caprin1-201ENSMUST00000028607 Irx3P81067 507 aa17.02■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Arhgap27A2AB59 869 aa17■□□□□ 0.31
Caprin1-201ENSMUST00000028607 MccE9PWI3 1003 aa17■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Mtus2Q3UHD3 1353 aa17■□□□□ 0.31
Caprin1-201ENSMUST00000028607 NgefQ8CHT1 710 aa16.99■□□□□ 0.31
Caprin1-201ENSMUST00000028607 1700019A02RikA0A087WPV9 146 aa16.99■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Rrp7aQ9D1C9 280 aaKnown RBP16.99■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Golga3P55937 1487 aa16.98■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Stk24Q99KH8 431 aa16.98■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Kif15Q6P9L6 1387 aa16.98■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Rwdd1Q9CQK7 243 aa16.97■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Rsf1E9PWW9 1441 aaKnown RBP16.97■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Zfp777B9EKF4 885 aa16.97■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Erich6bQ9D4S6 220 aa16.97■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Tnnt2P50752 301 aa16.96■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Bcl11aQ9QYE3 773 aa16.96■□□□□ 0.31
Caprin1-201ENSMUST00000028607 Dnttip2Q8R2M2 758 aaKnown RBP16.95■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Mia2Q91ZV0 1396 aa16.95■□□□□ 0.3
Caprin1-201ENSMUST00000028607 SafbD3YXK2 937 aaKnown RBP16.95■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Ccdc18Q640L5 1455 aa16.95■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Sh3bp5Q9Z131 463 aa16.95■□□□□ 0.3
Caprin1-201ENSMUST00000028607 AU015836B2RUM3 263 aa16.94■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Znf316Q6PGE4 1016 aa16.94■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Wwc2Q6NXJ0 1187 aa16.93■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Slc4a3P16283 1227 aa16.93■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Cnga1P29974 684 aa16.91■□□□□ 0.3
Caprin1-201ENSMUST00000028607 HnrnpuQ8VEK3 800 aaKnown RBP16.91■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Gm973E9Q295 1059 aa16.9■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Tcerg1Q8CGF7 1100 aaKnown RBP16.89■□□□□ 0.3
Caprin1-201ENSMUST00000028607 Pcmtd1P59913 357 aa16.89■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Supt16hQ920B9 1047 aa16.88■□□□□ 0.29
Caprin1-201ENSMUST00000028607 PtmsQ9D0J8 101 aaKnown RBP16.88■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Calcoco2A2A6M5 331 aa16.86■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Dnai1Q8C0M8 701 aa16.85■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Mak16Q8BGS0 296 aaKnown RBP16.84■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Fhad1A6PWD2 1420 aa16.84■□□□□ 0.29
Caprin1-201ENSMUST00000028607 MsnP26041 577 aaKnown RBP16.83■□□□□ 0.29
Caprin1-201ENSMUST00000028607 Anapc15P60007 132 aa16.83■□□□□ 0.28
Caprin1-201ENSMUST00000028607 EspnQ9ET47 871 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 720 ms