RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 BlmO88700 1416 aa22,45■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Upf2A2AT37 1269 aaKnown RBP22,43■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Chic2Q9D9G3 165 aa22,43■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Trim44Q9QXA7 346 aa22,43■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Ccer2J3QPU5 274 aa22,41■■□□□ 1,18
Col17a1-201ENSMUST00000026045 SafbD3YXK2 937 aaKnown RBP22,41■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Erich6D3Z6S9 713 aa22,39■■□□□ 1,18
Col17a1-201ENSMUST00000026045 Setd5Q5XJV7 1441 aa22,38■■□□□ 1,17
Col17a1-201ENSMUST00000026045 CanxP35564 591 aaKnown RBP22,36■■□□□ 1,17
Col17a1-201ENSMUST00000026045 Aebp2Q9Z248 504 aaKnown RBP22,35■■□□□ 1,17
Col17a1-201ENSMUST00000026045 Gtf3c3Q3TMP1 882 aa22,27■■□□□ 1,16
Col17a1-201ENSMUST00000026045 Prdm10Q3UTQ7 1184 aa22,27■■□□□ 1,16
Col17a1-201ENSMUST00000026045 AU015836B2RUM3 263 aa22,25■■□□□ 1,15
Col17a1-201ENSMUST00000026045 Kif15Q6P9L6 1387 aa22,25■■□□□ 1,15
Col17a1-201ENSMUST00000026045 Taok2Q6ZQ29 1240 aa22,22■■□□□ 1,15
Col17a1-201ENSMUST00000026045 Tnnt2P50752 301 aa22,21■■□□□ 1,15
Col17a1-201ENSMUST00000026045 Hdac5Q9Z2V6 1113 aa22,2■■□□□ 1,14
Col17a1-201ENSMUST00000026045 Nlrp6Q91WS2 869 aa22,2■■□□□ 1,14
Col17a1-201ENSMUST00000026045 DekQ7TNV0 380 aaKnown RBP22,17■■□□□ 1,14
Col17a1-201ENSMUST00000026045 Ccdc88bQ4QRL3 1481 aa22,15■■□□□ 1,14
Col17a1-201ENSMUST00000026045 Gm13697A2AK42 830 aa22,13■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Atp1b4Q99ME6 356 aa22,13■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Eea1Q8BL66 1411 aa22,12■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Mrs2Q5NCE8 434 aa22,12■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Vsig10D3YX43 558 aa22,09■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Htatsf1Q8BGC0 757 aa22,08■■□□□ 1,13
Col17a1-201ENSMUST00000026045 Polr3glQ8R0C0 218 aa22,06■■□□□ 1,12
Col17a1-201ENSMUST00000026045 Hsp90ab1P11499 724 aaKnown RBP22,03■■□□□ 1,12
Col17a1-201ENSMUST00000026045 Supt16hQ920B9 1047 aa22■■□□□ 1,11
Col17a1-201ENSMUST00000026045 Ccdc18Q640L5 1455 aa21,99■■□□□ 1,11
Col17a1-201ENSMUST00000026045 Ercc6F8VPZ5 1481 aa21,97■■□□□ 1,11
Col17a1-201ENSMUST00000026045 Rad21Q61550 635 aaKnown RBP21,96■■□□□ 1,11
Col17a1-201ENSMUST00000026045 P3h3Q8CG70 732 aa21,96■■□□□ 1,11
Col17a1-201ENSMUST00000026045 Trim30dE9PWL0 497 aa21,95■■□□□ 1,1
Col17a1-201ENSMUST00000026045 Rgl3Q3UYI5 709 aa21,93■■□□□ 1,1
Col17a1-201ENSMUST00000026045 Ppm1gQ61074 542 aa21,93■■□□□ 1,1
Col17a1-201ENSMUST00000026045 Dnttip2Q8R2M2 758 aaKnown RBP21,92■■□□□ 1,1
Col17a1-201ENSMUST00000026045 PtmaP26350 111 aa21,91■■□□□ 1,1
Col17a1-201ENSMUST00000026045 Cep162Q6ZQ06 1403 aa21,88■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Plcb2A3KGF7 1181 aa21,88■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Spryd3E9Q9B3 442 aa21,87■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Sycp2Q9CUU3 1500 aa21,86■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Clstn2Q9ER65 966 aa21,85■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Ipo9Q91YE6 1041 aa21,83■■□□□ 1,09
Col17a1-201ENSMUST00000026045 Fmn1Q05860 1466 aa21,83■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Gm13695A2AK44 830 aa21,81■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Plcd4Q8K3R3 807 aa21,8■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Rtn4Q99P72 1162 aaKnown RBP21,8■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Znf316Q6PGE4 1016 aa21,79■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Arhgap27A2AB59 869 aa21,78■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Cecr2E9Q2Z1 1453 aa21,78■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Rangap1P46061 589 aaKnown RBP21,77■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Ofd1Q80Z25 1017 aa21,77■■□□□ 1,08
Col17a1-201ENSMUST00000026045 Grwd1Q810D6 446 aaKnown RBP21,75■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Crybg2B7ZCC2 1516 aa21,74■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Slc4a3P16283 1227 aa21,74■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Rrp12Q6P5B0 1295 aaKnown RBP21,74■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Tcerg1Q8CGF7 1100 aaKnown RBP21,74■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Hspa5P20029 655 aaKnown RBP21,72■■□□□ 1,07
Col17a1-201ENSMUST00000026045 Smarca2Q6DIC0 1577 aa21,72■■□□□ 1,07
Col17a1-201ENSMUST00000026045 CftrP26361 1476 aa21,72■■□□□ 1,07
Col17a1-201ENSMUST00000026045 ScribQ80U72 1612 aa21,7■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Arid4bA2CG63 1314 aaKnown RBP21,7■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Nolc1E9Q5C9 702 aaKnown RBP21,69■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Znf326O88291 580 aa21,69■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Plppr3Q7TPB0 716 aa21,68■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Mia2Q91ZV0 1396 aa21,67■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Pds5bQ4VA53 1446 aaKnown RBP21,66■■□□□ 1,06
Col17a1-201ENSMUST00000026045 MsnP26041 577 aaKnown RBP21,64■■□□□ 1,06
Col17a1-201ENSMUST00000026045 Card11Q8CIS0 1159 aa21,64■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Adam1bQ8R534 806 aa21,63■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Synj1Q8CHC4 1574 aa21,63■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Erich6bQ9D4S6 220 aa21,62■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Mtus2Q3UHD3 1353 aa21,62■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Dnai1Q8C0M8 701 aa21,6■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Kdm2aP59997 1161 aa21,59■■□□□ 1,05
Col17a1-201ENSMUST00000026045 Dbr1Q923B1 550 aa21,56■■□□□ 1,04
Col17a1-201ENSMUST00000026045 B4galnt3Q6L8S8 986 aa21,55■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Rrp7aQ9D1C9 280 aaKnown RBP21,55■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Rapgef2Q8CHG7 1496 aa21,54■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Cwc22Q8C5N3 908 aaKnown RBP21,54■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Pdcl3Q8BVF2 240 aa21,53■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Aebp1Q640N1 1128 aa21,53■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Trim26Q99PN3 545 aa21,52■■□□□ 1,04
Col17a1-201ENSMUST00000026045 Mroh3A0A1D5RM54 893 aa21,52■■□□□ 1,03
Col17a1-201ENSMUST00000026045 IbspQ61711 324 aa21,51■■□□□ 1,03
Col17a1-201ENSMUST00000026045 BccipQ9CWI3 316 aa21,5■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Kif27Q7M6Z4 1394 aa21,5■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Ddrgk1Q80WW9 315 aa21,5■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Fbxo2Q80UW2 297 aa21,47■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Sin3aQ60520 1274 aaKnown RBP21,47■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Wwc2Q6NXJ0 1187 aa21,47■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Ipo4Q8VI75 1082 aa21,46■■□□□ 1,03
Col17a1-201ENSMUST00000026045 Baz1bQ9Z277 1479 aa21,45■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Pkd2O35245 966 aa21,44■■□□□ 1,02
Col17a1-201ENSMUST00000026045 4933402E13RikQ9D4D2 429 aa21,43■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Fyco1Q8VDC1 1437 aa21,43■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Apbb1Q9QXJ1 710 aa21,42■■□□□ 1,02
Col17a1-201ENSMUST00000026045 VgfQ0VGU4 617 aa21,41■■□□□ 1,02
Col17a1-201ENSMUST00000026045 Srpk2O54781 681 aaKnown RBP21,4■■□□□ 1,02
Retrieved 100 of 22,080 RNA–protein pairs in 27,2 ms