RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Setd5Q5XJV7 1441 aa16.86■□□□□ 0.29
Ercc4-201ENSMUST00000023206 Slc4a3P16283 1227 aa16.8■□□□□ 0.28
Ercc4-201ENSMUST00000023206 BlmO88700 1416 aa16.8■□□□□ 0.28
Ercc4-201ENSMUST00000023206 Znf710Q3U288 666 aa16.79■□□□□ 0.28
Ercc4-201ENSMUST00000023206 Atad2bE9Q166 1460 aaKnown RBP16.78■□□□□ 0.28
Ercc4-201ENSMUST00000023206 Stra8P70278 393 aa16.77■□□□□ 0.28
Ercc4-201ENSMUST00000023206 Eea1Q8BL66 1411 aa16.77■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Ncapd3Q6ZQK0 1506 aa16.76■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Pak3Q61036 559 aa16.75■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Rtl5Q5DTT4 599 aa16.75■□□□□ 0.27
Ercc4-201ENSMUST00000023206 4933416C03RikQ3V063 378 aa16.73■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Wdr43Q6ZQL4 677 aaKnown RBP16.72■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Plcd4Q8K3R3 807 aa16.71■□□□□ 0.27
Ercc4-201ENSMUST00000023206 PtprkP35822 1457 aa16.71■□□□□ 0.27
Ercc4-201ENSMUST00000023206 Hspa5P20029 655 aaKnown RBP16.69■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Kif15Q6P9L6 1387 aa16.68■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Arap1Q4LDD4 1452 aa16.67■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Pds5bQ4VA53 1446 aaKnown RBP16.67■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Chic2Q9D9G3 165 aa16.65■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Arhgap35Q91YM2 1499 aa16.64■□□□□ 0.26
Ercc4-201ENSMUST00000023206 Sin3aQ60520 1274 aaKnown RBP16.62■□□□□ 0.25
Ercc4-201ENSMUST00000023206 DaxxO35613 739 aa16.61■□□□□ 0.25
Ercc4-201ENSMUST00000023206 Frmpd1A2AKB4 1549 aa16.61■□□□□ 0.25
Ercc4-201ENSMUST00000023206 Upf2A2AT37 1269 aaKnown RBP16.58■□□□□ 0.24
Ercc4-201ENSMUST00000023206 Gtf3c3Q3TMP1 882 aa16.58■□□□□ 0.24
Ercc4-201ENSMUST00000023206 Baz1bQ9Z277 1479 aa16.56■□□□□ 0.24
Ercc4-201ENSMUST00000023206 Npm1Q61937 292 aaKnown RBP16.53■□□□□ 0.24
Ercc4-201ENSMUST00000023206 Eif4g1Q6NZJ6 1600 aaKnown RBP16.52■□□□□ 0.24
Ercc4-201ENSMUST00000023206 TnnQ80Z71 1560 aa16.52■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Rpap1Q80TE0 1409 aa16.51■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Wdr62Q3U3T8 1523 aa16.5■□□□□ 0.23
Ercc4-201ENSMUST00000023206 AqrQ8CFQ3 1481 aaKnown RBP16.5■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Ccdc27Q3V036 639 aa16.49■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Ccdc18Q640L5 1455 aa16.49■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Arhgef5E9Q7D5 1581 aa16.47■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Mrs2Q5NCE8 434 aa16.47■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Zbtb7cQ8VCZ7 619 aa16.47■□□□□ 0.23
Ercc4-201ENSMUST00000023206 Irx3P81067 507 aa16.46■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Pknox2Q8BG99 474 aa16.46■□□□□ 0.22
Ercc4-201ENSMUST00000023206 NrkQ9R0G8 1455 aa16.43■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Naip1Q9QWK5 1403 aa16.43■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Ccer2J3QPU5 274 aa16.42■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Lamc3Q9R0B6 1581 aa16.42■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Ercc6F8VPZ5 1481 aa16.41■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Hsp90aa1P07901 733 aaKnown RBP16.41■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Kcnh8P59111 1102 aa16.4■□□□□ 0.22
Ercc4-201ENSMUST00000023206 NrdcQ8BHG1 1161 aa16.4■□□□□ 0.22
Ercc4-201ENSMUST00000023206 Shroom4Q1W617 1475 aa16.39■□□□□ 0.21
Ercc4-201ENSMUST00000023206 ChgaP26339 463 aaKnown RBP16.39■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Ubl4bQ9CQ84 188 aa16.39■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Zbtb4Q5F293 982 aa16.38■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Wwc2Q6NXJ0 1187 aa16.37■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Liat1Q810M6 228 aa16.36■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Camsap1A2AHC3 1581 aa16.36■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Fgd1P52734 960 aa16.36■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Tiam1Q60610 1591 aa16.35■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Gm13697A2AK42 830 aa16.34■□□□□ 0.21
Ercc4-201ENSMUST00000023206 Znf692Q3U381 531 aa16.32■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Aebp1Q640N1 1128 aa16.32■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Kdm5bQ80Y84 1544 aa16.31■□□□□ 0.2
Ercc4-201ENSMUST00000023206 ArxO35085 564 aa16.31■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Taok2Q6ZQ29 1240 aa16.31■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Grin2bQ01097 1482 aa16.31■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Arhgap27A2AB59 869 aa16.3■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Egfem1Q8C088 590 aa16.3■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Slx4Q6P1D7 1565 aa16.29■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Unc13aQ4KUS2 1712 aa16.29■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Cux2P70298 1426 aa16.27■□□□□ 0.2
Ercc4-201ENSMUST00000023206 Pcf11G3X9Z4 1553 aa16.27■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Mroh2bQ7M6Y6 1581 aa16.26■□□□□ 0.19
Ercc4-201ENSMUST00000023206 3425401B19RikD3Z1D3 1412 aa16.25■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Rtn4Q99P72 1162 aaKnown RBP16.25■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Map3k1P53349 1493 aa16.24■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Washc2Q6PGL7 1334 aa16.23■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Fyco1Q8VDC1 1437 aa16.22■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Ankrd26Q811D2 1581 aa16.22■□□□□ 0.19
Ercc4-201ENSMUST00000023206 CntlnA2AM05 1397 aa16.22■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Dhx29Q6PGC1 1365 aaKnown RBP16.21■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Ipo9Q91YE6 1041 aa16.21■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Phldb1Q6PDH0 1371 aaKnown RBP16.21■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Mia2Q91ZV0 1396 aa16.21■□□□□ 0.19
Ercc4-201ENSMUST00000023206 Smg6P61406 1418 aaKnown RBP16.19■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Cux1P53564 1515 aa16.19■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Exoc6Q8R313 802 aa16.18■□□□□ 0.18
Ercc4-201ENSMUST00000023206 TchhA0A0B4J1F9 1599 aa16.18■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Zfp644E9QA22 1323 aa16.17■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Rgl3Q3UYI5 709 aa16.17■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Carmil1Q6EDY6 1374 aa16.16■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Ccnb3Q810T2 1396 aa16.16■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Mphosph9A6H5Y1 991 aa16.15■□□□□ 0.18
Ercc4-201ENSMUST00000023206 Cabp1Q9JLK7 227 aa16.15■□□□□ 0.18
Ercc4-201ENSMUST00000023206 LrpprcQ6PB66 1392 aaKnown RBP16.14■□□□□ 0.17
Ercc4-201ENSMUST00000023206 B4galnt3Q6L8S8 986 aa16.14■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Ofd1Q80Z25 1017 aa16.13■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Fhad1A6PWD2 1420 aa16.13■□□□□ 0.17
Ercc4-201ENSMUST00000023206 CanxP35564 591 aaKnown RBP16.13■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Slc4a2P13808 1237 aaKnown RBP16.12■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Dbr1Q923B1 550 aa16.12■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Pkd2O35245 966 aa16.11■□□□□ 0.17
Ercc4-201ENSMUST00000023206 Rad21Q61550 635 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms