RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Ifnlr1Q8CGK5 535 aa20.14■□□□□ 0.81
Col2a1-201ENSMUST00000023123 Ccdc27Q3V036 639 aa20.12■□□□□ 0.81
Col2a1-201ENSMUST00000023123 Trim44Q9QXA7 346 aa20.11■□□□□ 0.81
Col2a1-201ENSMUST00000023123 CatipB9EKE5 520 aa20.1■□□□□ 0.81
Col2a1-201ENSMUST00000023123 DekQ7TNV0 380 aaKnown RBP20.1■□□□□ 0.81
Col2a1-201ENSMUST00000023123 Fkbp15Q6P9Q6 1216 aaKnown RBP20.09■□□□□ 0.81
Col2a1-201ENSMUST00000023123 Clstn2Q9ER65 966 aa20.08■□□□□ 0.81
Col2a1-201ENSMUST00000023123 Ofd1Q80Z25 1017 aa20.07■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Hsp90ab1P11499 724 aaKnown RBP20.06■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Rangap1P46061 589 aaKnown RBP20.05■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Setd5Q5XJV7 1441 aa20.05■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Trim30dE9PWL0 497 aa20.05■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Gm13695A2AK44 830 aa20.03■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Ythdc1E9Q5K9 736 aaKnown RBP20.03■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Ubl4bQ9CQ84 188 aa20.02■□□□□ 0.8
Col2a1-201ENSMUST00000023123 Baz1aO88379 1555 aa20■□□□□ 0.79
Col2a1-201ENSMUST00000023123 Lmod3E9QA62 571 aa20■□□□□ 0.79
Col2a1-201ENSMUST00000023123 Htatsf1Q8BGC0 757 aa19.98■□□□□ 0.79
Col2a1-201ENSMUST00000023123 P3h3Q8CG70 732 aa19.97■□□□□ 0.79
Col2a1-201ENSMUST00000023123 Kdm5dQ62240 1548 aa19.96■□□□□ 0.79
Col2a1-201ENSMUST00000023123 Vsig10D3YX43 558 aa19.95■□□□□ 0.78
Col2a1-201ENSMUST00000023123 Bcl11aQ9QYE3 773 aa19.94■□□□□ 0.78
Col2a1-201ENSMUST00000023123 Ppm1gQ61074 542 aa19.92■□□□□ 0.78
Col2a1-201ENSMUST00000023123 Rgl3Q3UYI5 709 aa19.92■□□□□ 0.78
Col2a1-201ENSMUST00000023123 Fgd1P52734 960 aa19.9■□□□□ 0.78
Col2a1-201ENSMUST00000023123 Cwc22Q8C5N3 908 aaKnown RBP19.86■□□□□ 0.77
Col2a1-201ENSMUST00000023123 Golga3P55937 1487 aa19.85■□□□□ 0.77
Col2a1-201ENSMUST00000023123 Trim26Q99PN3 545 aa19.84■□□□□ 0.77
Col2a1-201ENSMUST00000023123 SafbD3YXK2 937 aaKnown RBP19.83■□□□□ 0.77
Col2a1-201ENSMUST00000023123 Irx3P81067 507 aa19.83■□□□□ 0.77
Col2a1-201ENSMUST00000023123 PtmaP26350 111 aa19.82■□□□□ 0.76
Col2a1-201ENSMUST00000023123 Eea1Q8BL66 1411 aa19.82■□□□□ 0.76
Col2a1-201ENSMUST00000023123 Plcb2A3KGF7 1181 aa19.81■□□□□ 0.76
Col2a1-201ENSMUST00000023123 Card11Q8CIS0 1159 aa19.76■□□□□ 0.75
Col2a1-201ENSMUST00000023123 Arid4bA2CG63 1314 aaKnown RBP19.72■□□□□ 0.75
Col2a1-201ENSMUST00000023123 Apbb1Q9QXJ1 710 aa19.72■□□□□ 0.75
Col2a1-201ENSMUST00000023123 Grwd1Q810D6 446 aaKnown RBP19.7■□□□□ 0.74
Col2a1-201ENSMUST00000023123 Tcerg1Q8CGF7 1100 aaKnown RBP19.7■□□□□ 0.74
Col2a1-201ENSMUST00000023123 Mbd3Q9Z2D8 285 aaKnown RBP19.68■□□□□ 0.74
Col2a1-201ENSMUST00000023123 Mia2Q91ZV0 1396 aa19.67■□□□□ 0.74
Col2a1-201ENSMUST00000023123 Map7O88735 730 aa19.66■□□□□ 0.74
Col2a1-201ENSMUST00000023123 AU015836B2RUM3 263 aa19.65■□□□□ 0.74
Col2a1-201ENSMUST00000023123 Dbr1Q923B1 550 aa19.64■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Rsf1E9PWW9 1441 aaKnown RBP19.63■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Neurod2Q62414 383 aa19.63■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Chmp4bQ9D8B3 224 aaKnown RBP19.63■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Kif15Q6P9L6 1387 aa19.61■□□□□ 0.73
Col2a1-201ENSMUST00000023123 B4galnt3Q6L8S8 986 aa19.6■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Kdm2aP59997 1161 aa19.6■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Mroh3A0A1D5RM54 893 aa19.59■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Wwc2Q6NXJ0 1187 aa19.59■□□□□ 0.73
Col2a1-201ENSMUST00000023123 IqubQ8CDK3 788 aa19.58■□□□□ 0.73
Col2a1-201ENSMUST00000023123 Slc4a3P16283 1227 aa19.57■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Supt16hQ920B9 1047 aa19.57■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Mapk8ip3Q9ESN9 1337 aa19.57■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Rwdd1Q9CQK7 243 aa19.56■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Srpk2O54781 681 aaKnown RBP19.55■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Hspa5P20029 655 aaKnown RBP19.55■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Spryd3E9Q9B3 442 aa19.55■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Adam1bQ8R534 806 aa19.55■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Ercc6F8VPZ5 1481 aa19.54■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Casc1Q6TDU8 730 aa19.53■□□□□ 0.72
Col2a1-201ENSMUST00000023123 Gm20521D3Z5F7 333 aa19.52■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Dnai1Q8C0M8 701 aa19.52■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Chmp5Q9D7S9 219 aa19.51■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Ipo9Q91YE6 1041 aa19.5■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Mtus2Q3UHD3 1353 aa19.5■□□□□ 0.71
Col2a1-201ENSMUST00000023123 NudcO35685 332 aaKnown RBP19.5■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Dnttip2Q8R2M2 758 aaKnown RBP19.49■□□□□ 0.71
Col2a1-201ENSMUST00000023123 KnstrnQ9D9Z1 312 aaKnown RBP19.49■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Exosc9Q9JHI7 438 aaKnown RBP19.48■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Armcx1Q9CX83 456 aa19.47■□□□□ 0.71
Col2a1-201ENSMUST00000023123 Sycp2Q9CUU3 1500 aa19.45■□□□□ 0.7
Col2a1-201ENSMUST00000023123 Gm6268A2A3U9 297 aa19.44■□□□□ 0.7
Col2a1-201ENSMUST00000023123 EspnQ9ET47 871 aa19.44■□□□□ 0.7
Col2a1-201ENSMUST00000023123 Ccdc18Q640L5 1455 aa19.44■□□□□ 0.7
Col2a1-201ENSMUST00000023123 Exoc6Q8R313 802 aa19.42■□□□□ 0.7
Col2a1-201ENSMUST00000023123 Tnnt2P50752 301 aa19.4■□□□□ 0.7
Col2a1-201ENSMUST00000023123 PtmsQ9D0J8 101 aaKnown RBP19.39■□□□□ 0.7
Col2a1-201ENSMUST00000023123 Plppr3Q7TPB0 716 aa19.39■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Irx6Q9ER75 438 aa19.39■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Rrp7aQ9D1C9 280 aaKnown RBP19.38■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Iqcf3Q9D498 203 aa19.38■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Erich6bQ9D4S6 220 aa19.38■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Zscan21Q07231 555 aa19.37■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Zfp777B9EKF4 885 aa19.36■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Pds5bQ4VA53 1446 aaKnown RBP19.36■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Pkd2O35245 966 aa19.35■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Mak16Q8BGS0 296 aaKnown RBP19.35■□□□□ 0.69
Col2a1-201ENSMUST00000023123 ScribQ80U72 1612 aa19.35■□□□□ 0.69
Col2a1-201ENSMUST00000023123 PnnO35691 725 aaKnown RBP19.35■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Hsp90b1P08113 802 aaKnown RBP19.35■□□□□ 0.69
Col2a1-201ENSMUST00000023123 MccE9PWI3 1003 aa19.34■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Rundc1Q0VDN7 615 aa19.34■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Sin3aQ60520 1274 aaKnown RBP19.34■□□□□ 0.69
Col2a1-201ENSMUST00000023123 HnrnpuQ8VEK3 800 aaKnown RBP19.34■□□□□ 0.69
Col2a1-201ENSMUST00000023123 Safb2Q80YR5 991 aaKnown RBP19.33■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Speer4f1Q9D5Q6 258 aa19.32■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Cep162Q6ZQ06 1403 aa19.32■□□□□ 0.68
Col2a1-201ENSMUST00000023123 Arhgap27A2AB59 869 aa19.31■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms