RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Rangap1P46061 589 aaKnown RBP17.08■□□□□ 0.32
Vcl-201ENSMUST00000022369 Aebp2Q9Z248 504 aaKnown RBP17.07■□□□□ 0.32
Vcl-201ENSMUST00000022369 NacadQ5SWP3 1504 aa17.06■□□□□ 0.32
Vcl-201ENSMUST00000022369 Ccdc9Q8VC31 543 aaKnown RBP17.02■□□□□ 0.31
Vcl-201ENSMUST00000022369 Rgl3Q3UYI5 709 aa17.02■□□□□ 0.31
Vcl-201ENSMUST00000022369 Baz1aO88379 1555 aa17.01■□□□□ 0.31
Vcl-201ENSMUST00000022369 Hsp90aa1P07901 733 aaKnown RBP17■□□□□ 0.31
Vcl-201ENSMUST00000022369 Eea1Q8BL66 1411 aa16.98■□□□□ 0.31
Vcl-201ENSMUST00000022369 1700123L14RikQ3V2K7 440 aa16.96■□□□□ 0.31
Vcl-201ENSMUST00000022369 Ofd1Q80Z25 1017 aa16.96■□□□□ 0.31
Vcl-201ENSMUST00000022369 Rsf1E9PWW9 1441 aaKnown RBP16.95■□□□□ 0.3
Vcl-201ENSMUST00000022369 Kif15Q6P9L6 1387 aa16.93■□□□□ 0.3
Vcl-201ENSMUST00000022369 CanxP35564 591 aaKnown RBP16.93■□□□□ 0.3
Vcl-201ENSMUST00000022369 Fgd1P52734 960 aa16.91■□□□□ 0.3
Vcl-201ENSMUST00000022369 DekQ7TNV0 380 aaKnown RBP16.9■□□□□ 0.3
Vcl-201ENSMUST00000022369 Plppr3Q7TPB0 716 aa16.9■□□□□ 0.3
Vcl-201ENSMUST00000022369 Trim30dE9PWL0 497 aa16.89■□□□□ 0.29
Vcl-201ENSMUST00000022369 Hsp90ab1P11499 724 aaKnown RBP16.89■□□□□ 0.29
Vcl-201ENSMUST00000022369 Fam71e1A1L3C1 212 aa16.88■□□□□ 0.29
Vcl-201ENSMUST00000022369 Trim26Q99PN3 545 aa16.87■□□□□ 0.29
Vcl-201ENSMUST00000022369 Cwc22Q8C5N3 908 aaKnown RBP16.87■□□□□ 0.29
Vcl-201ENSMUST00000022369 P3h3Q8CG70 732 aa16.86■□□□□ 0.29
Vcl-201ENSMUST00000022369 Card11Q8CIS0 1159 aa16.84■□□□□ 0.29
Vcl-201ENSMUST00000022369 Ccdc18Q640L5 1455 aa16.84■□□□□ 0.29
Vcl-201ENSMUST00000022369 Grwd1Q810D6 446 aaKnown RBP16.84■□□□□ 0.29
Vcl-201ENSMUST00000022369 Trim44Q9QXA7 346 aa16.81■□□□□ 0.28
Vcl-201ENSMUST00000022369 Vsig10D3YX43 558 aa16.8■□□□□ 0.28
Vcl-201ENSMUST00000022369 CatipB9EKE5 520 aa16.79■□□□□ 0.28
Vcl-201ENSMUST00000022369 Kdm2aP59997 1161 aa16.79■□□□□ 0.28
Vcl-201ENSMUST00000022369 Mia2Q91ZV0 1396 aa16.78■□□□□ 0.28
Vcl-201ENSMUST00000022369 IqubQ8CDK3 788 aa16.78■□□□□ 0.28
Vcl-201ENSMUST00000022369 Mroh3A0A1D5RM54 893 aa16.78■□□□□ 0.28
Vcl-201ENSMUST00000022369 Safb2Q80YR5 991 aaKnown RBP16.77■□□□□ 0.28
Vcl-201ENSMUST00000022369 Srpk2O54781 681 aaKnown RBP16.76■□□□□ 0.27
Vcl-201ENSMUST00000022369 Mtus2Q3UHD3 1353 aa16.74■□□□□ 0.27
Vcl-201ENSMUST00000022369 Ccdc27Q3V036 639 aa16.74■□□□□ 0.27
Vcl-201ENSMUST00000022369 Htatsf1Q8BGC0 757 aa16.73■□□□□ 0.27
Vcl-201ENSMUST00000022369 Arhgap27A2AB59 869 aa16.73■□□□□ 0.27
Vcl-201ENSMUST00000022369 Ercc6F8VPZ5 1481 aa16.72■□□□□ 0.27
Vcl-201ENSMUST00000022369 Gm20521D3Z5F7 333 aa16.71■□□□□ 0.27
Vcl-201ENSMUST00000022369 Apbb1Q9QXJ1 710 aa16.71■□□□□ 0.27
Vcl-201ENSMUST00000022369 Ppm1gQ61074 542 aa16.71■□□□□ 0.27
Vcl-201ENSMUST00000022369 Ythdc1E9Q5K9 736 aaKnown RBP16.69■□□□□ 0.26
Vcl-201ENSMUST00000022369 Neurod2Q62414 383 aa16.69■□□□□ 0.26
Vcl-201ENSMUST00000022369 Exosc9Q9JHI7 438 aaKnown RBP16.68■□□□□ 0.26
Vcl-201ENSMUST00000022369 Lmod3E9QA62 571 aa16.68■□□□□ 0.26
Vcl-201ENSMUST00000022369 Mapk8ip3Q9ESN9 1337 aa16.67■□□□□ 0.26
Vcl-201ENSMUST00000022369 Rrp7aQ9D1C9 280 aaKnown RBP16.67■□□□□ 0.26
Vcl-201ENSMUST00000022369 Arid4bA2CG63 1314 aaKnown RBP16.65■□□□□ 0.26
Vcl-201ENSMUST00000022369 Hspa5P20029 655 aaKnown RBP16.64■□□□□ 0.25
Vcl-201ENSMUST00000022369 PtmaP26350 111 aa16.64■□□□□ 0.25
Vcl-201ENSMUST00000022369 Plcb2A3KGF7 1181 aa16.64■□□□□ 0.25
Vcl-201ENSMUST00000022369 Chmp4bQ9D8B3 224 aaKnown RBP16.62■□□□□ 0.25
Vcl-201ENSMUST00000022369 Map7O88735 730 aa16.6■□□□□ 0.25
Vcl-201ENSMUST00000022369 Irx6Q9ER75 438 aa16.6■□□□□ 0.25
Vcl-201ENSMUST00000022369 SafbD3YXK2 937 aaKnown RBP16.6■□□□□ 0.25
Vcl-201ENSMUST00000022369 Wwc2Q6NXJ0 1187 aa16.59■□□□□ 0.25
Vcl-201ENSMUST00000022369 Mbd3Q9Z2D8 285 aaKnown RBP16.59■□□□□ 0.25
Vcl-201ENSMUST00000022369 Kdm5dQ62240 1548 aa16.58■□□□□ 0.24
Vcl-201ENSMUST00000022369 Dbr1Q923B1 550 aa16.58■□□□□ 0.24
Vcl-201ENSMUST00000022369 NudcO35685 332 aaKnown RBP16.57■□□□□ 0.24
Vcl-201ENSMUST00000022369 Cep162Q6ZQ06 1403 aa16.57■□□□□ 0.24
Vcl-201ENSMUST00000022369 Stag3O70576 1240 aa16.55■□□□□ 0.24
Vcl-201ENSMUST00000022369 Stk24Q99KH8 431 aa16.55■□□□□ 0.24
Vcl-201ENSMUST00000022369 Gm6268A2A3U9 297 aa16.55■□□□□ 0.24
Vcl-201ENSMUST00000022369 Ccdc88bQ4QRL3 1481 aa16.54■□□□□ 0.24
Vcl-201ENSMUST00000022369 Rwdd1Q9CQK7 243 aa16.54■□□□□ 0.24
Vcl-201ENSMUST00000022369 B4galnt3Q6L8S8 986 aa16.53■□□□□ 0.24
Vcl-201ENSMUST00000022369 Iqcf3Q9D498 203 aa16.53■□□□□ 0.24
Vcl-201ENSMUST00000022369 Pkd2O35245 966 aa16.53■□□□□ 0.24
Vcl-201ENSMUST00000022369 Zfp777B9EKF4 885 aa16.52■□□□□ 0.24
Vcl-201ENSMUST00000022369 Tcerg1Q8CGF7 1100 aaKnown RBP16.52■□□□□ 0.24
Vcl-201ENSMUST00000022369 Kif27Q7M6Z4 1394 aa16.51■□□□□ 0.23
Vcl-201ENSMUST00000022369 Fmn1Q05860 1466 aa16.5■□□□□ 0.23
Vcl-201ENSMUST00000022369 Armcx1Q9CX83 456 aa16.5■□□□□ 0.23
Vcl-201ENSMUST00000022369 Map4P27546 1125 aaKnown RBP16.49■□□□□ 0.23
Vcl-201ENSMUST00000022369 Rundc1Q0VDN7 615 aa16.49■□□□□ 0.23
Vcl-201ENSMUST00000022369 Fhad1A6PWD2 1420 aa16.47■□□□□ 0.23
Vcl-201ENSMUST00000022369 Slc4a3P16283 1227 aa16.47■□□□□ 0.23
Vcl-201ENSMUST00000022369 KnstrnQ9D9Z1 312 aaKnown RBP16.47■□□□□ 0.23
Vcl-201ENSMUST00000022369 Exoc6Q8R313 802 aa16.45■□□□□ 0.22
Vcl-201ENSMUST00000022369 Fyco1Q8VDC1 1437 aa16.45■□□□□ 0.22
Vcl-201ENSMUST00000022369 Supt16hQ920B9 1047 aa16.45■□□□□ 0.22
Vcl-201ENSMUST00000022369 Cnga1P29974 684 aa16.45■□□□□ 0.22
Vcl-201ENSMUST00000022369 Aebp1Q640N1 1128 aa16.44■□□□□ 0.22
Vcl-201ENSMUST00000022369 Casc1Q6TDU8 730 aa16.43■□□□□ 0.22
Vcl-201ENSMUST00000022369 Sin3aQ60520 1274 aaKnown RBP16.43■□□□□ 0.22
Vcl-201ENSMUST00000022369 Chmp5Q9D7S9 219 aa16.43■□□□□ 0.22
Vcl-201ENSMUST00000022369 1700019A02RikA0A087WPV9 146 aa16.42■□□□□ 0.22
Vcl-201ENSMUST00000022369 Irx3P81067 507 aa16.41■□□□□ 0.22
Vcl-201ENSMUST00000022369 Zscan21Q07231 555 aa16.41■□□□□ 0.22
Vcl-201ENSMUST00000022369 Hsp90b1P08113 802 aaKnown RBP16.4■□□□□ 0.22
Vcl-201ENSMUST00000022369 NgefQ8CHT1 710 aa16.4■□□□□ 0.22
Vcl-201ENSMUST00000022369 Speer4f1Q9D5Q6 258 aa16.4■□□□□ 0.22
Vcl-201ENSMUST00000022369 Mphosph9A6H5Y1 991 aa16.4■□□□□ 0.22
Vcl-201ENSMUST00000022369 Spryd3E9Q9B3 442 aa16.39■□□□□ 0.22
Vcl-201ENSMUST00000022369 Arhgap35Q91YM2 1499 aa16.39■□□□□ 0.22
Vcl-201ENSMUST00000022369 Tmf1B9EKI3 1091 aa16.39■□□□□ 0.21
Vcl-201ENSMUST00000022369 HnrnpuQ8VEK3 800 aaKnown RBP16.39■□□□□ 0.21
Vcl-201ENSMUST00000022369 Znf326O88291 580 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms