RNA–Protein interactions for RNA: ENSMUST00000021530.7

Hif1a-201, Transcript of Hypoxia-inducible factor 1-alpha, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Hif1a, Length 4,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1a-201ENSMUST00000021530 BlmO88700 1416 aa18.96■□□□□ 0.63
Hif1a-201ENSMUST00000021530 Kif15Q6P9L6 1387 aa18.96■□□□□ 0.63
Hif1a-201ENSMUST00000021530 Safb2Q80YR5 991 aaKnown RBP18.95■□□□□ 0.62
Hif1a-201ENSMUST00000021530 4933416C03RikQ3V063 378 aa18.94■□□□□ 0.62
Hif1a-201ENSMUST00000021530 Polr3glQ8R0C0 218 aa18.93■□□□□ 0.62
Hif1a-201ENSMUST00000021530 Ccer2J3QPU5 274 aa18.92■□□□□ 0.62
Hif1a-201ENSMUST00000021530 Aebp2Q9Z248 504 aaKnown RBP18.9■□□□□ 0.62
Hif1a-201ENSMUST00000021530 Setd5Q5XJV7 1441 aa18.86■□□□□ 0.61
Hif1a-201ENSMUST00000021530 Iqgap2Q3UQ44 1575 aa18.85■□□□□ 0.61
Hif1a-201ENSMUST00000021530 Clstn2Q9ER65 966 aa18.82■□□□□ 0.6
Hif1a-201ENSMUST00000021530 P3h3Q8CG70 732 aa18.79■□□□□ 0.6
Hif1a-201ENSMUST00000021530 Arhgap27A2AB59 869 aa18.78■□□□□ 0.6
Hif1a-201ENSMUST00000021530 Atad2bE9Q166 1460 aaKnown RBP18.77■□□□□ 0.6
Hif1a-201ENSMUST00000021530 Rangap1P46061 589 aaKnown RBP18.75■□□□□ 0.59
Hif1a-201ENSMUST00000021530 Eea1Q8BL66 1411 aa18.73■□□□□ 0.59
Hif1a-201ENSMUST00000021530 Ercc6F8VPZ5 1481 aa18.72■□□□□ 0.59
Hif1a-201ENSMUST00000021530 Pds5bQ4VA53 1446 aaKnown RBP18.72■□□□□ 0.59
Hif1a-201ENSMUST00000021530 Csrnp3P59055 597 aa18.7■□□□□ 0.58
Hif1a-201ENSMUST00000021530 Rgl3Q3UYI5 709 aa18.66■□□□□ 0.58
Hif1a-201ENSMUST00000021530 Ccdc18Q640L5 1455 aa18.64■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Ncapd3Q6ZQK0 1506 aa18.63■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Rad21Q61550 635 aaKnown RBP18.62■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Aplp2Q06335 707 aa18.62■□□□□ 0.57
Hif1a-201ENSMUST00000021530 1700123L14RikQ3V2K7 440 aa18.62■□□□□ 0.57
Hif1a-201ENSMUST00000021530 DiexfQ8BTT6 772 aaKnown RBP18.61■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Myt1Q8CFC2 1127 aa18.59■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Mrs2Q5NCE8 434 aa18.59■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Arhgap35Q91YM2 1499 aa18.59■□□□□ 0.57
Hif1a-201ENSMUST00000021530 Kdm2aP59997 1161 aa18.58■□□□□ 0.56
Hif1a-201ENSMUST00000021530 Eif4g1Q6NZJ6 1600 aaKnown RBP18.56■□□□□ 0.56
Hif1a-201ENSMUST00000021530 TnnQ80Z71 1560 aa18.55■□□□□ 0.56
Hif1a-201ENSMUST00000021530 ArxO35085 564 aa18.54■□□□□ 0.56
Hif1a-201ENSMUST00000021530 NrkQ9R0G8 1455 aa18.53■□□□□ 0.56
Hif1a-201ENSMUST00000021530 Grwd1Q810D6 446 aaKnown RBP18.52■□□□□ 0.56
Hif1a-201ENSMUST00000021530 Rrp7aQ9D1C9 280 aaKnown RBP18.52■□□□□ 0.56
Hif1a-201ENSMUST00000021530 4930567H17RikQ3V0K5 233 aa18.51■□□□□ 0.55
Hif1a-201ENSMUST00000021530 MyclP10166 368 aa18.49■□□□□ 0.55
Hif1a-201ENSMUST00000021530 Mroh3A0A1D5RM54 893 aa18.48■□□□□ 0.55
Hif1a-201ENSMUST00000021530 Arap1Q4LDD4 1452 aa18.48■□□□□ 0.55
Hif1a-201ENSMUST00000021530 Shroom4Q1W617 1475 aa18.47■□□□□ 0.55
Hif1a-201ENSMUST00000021530 Map3k1P53349 1493 aa18.47■□□□□ 0.55
Hif1a-201ENSMUST00000021530 Anp32aO35381 247 aa18.45■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Arhgef5E9Q7D5 1581 aa18.45■□□□□ 0.54
Hif1a-201ENSMUST00000021530 PtprkP35822 1457 aa18.44■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Gm38655A0A286YDK6 273 aa18.43■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Lamc3Q9R0B6 1581 aa18.42■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Arid3cA6PWV5 409 aa18.41■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Frmpd1A2AKB4 1549 aa18.41■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Srpk2O54781 681 aaKnown RBP18.41■□□□□ 0.54
Hif1a-201ENSMUST00000021530 Baz1bQ9Z277 1479 aa18.4■□□□□ 0.54
Hif1a-201ENSMUST00000021530 IqubQ8CDK3 788 aa18.4■□□□□ 0.54
Hif1a-201ENSMUST00000021530 DaxxO35613 739 aa18.39■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Trim26Q99PN3 545 aa18.39■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Wdr62Q3U3T8 1523 aa18.38■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Ppp1r18Q8BQ30 594 aa18.38■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Stk24Q99KH8 431 aa18.38■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Irx6Q9ER75 438 aa18.38■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Gm20521D3Z5F7 333 aa18.37■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Mtus2Q3UHD3 1353 aa18.35■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Exosc9Q9JHI7 438 aaKnown RBP18.34■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Tiam1Q60610 1591 aa18.33■□□□□ 0.53
Hif1a-201ENSMUST00000021530 Upf2A2AT37 1269 aaKnown RBP18.33■□□□□ 0.53
Hif1a-201ENSMUST00000021530 NgefQ8CHT1 710 aa18.32■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Camsap1A2AHC3 1581 aa18.32■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Rtl5Q5DTT4 599 aa18.31■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Calr4Q3TQS0 420 aa18.3■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Card11Q8CIS0 1159 aa18.3■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Fgd1P52734 960 aa18.28■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Naip1Q9QWK5 1403 aa18.28■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Mroh2bQ7M6Y6 1581 aa18.28■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Grin2bQ01097 1482 aa18.28■□□□□ 0.52
Hif1a-201ENSMUST00000021530 CntlnA2AM05 1397 aa18.28■□□□□ 0.52
Hif1a-201ENSMUST00000021530 AknaQ80VW7 1404 aa18.27■□□□□ 0.52
Hif1a-201ENSMUST00000021530 Ppp4r2Q0VGB7 417 aa18.27■□□□□ 0.51
Hif1a-201ENSMUST00000021530 Mia2Q91ZV0 1396 aa18.25■□□□□ 0.51
Hif1a-201ENSMUST00000021530 Kif27Q7M6Z4 1394 aa18.23■□□□□ 0.51
Hif1a-201ENSMUST00000021530 AqrQ8CFQ3 1481 aaKnown RBP18.23■□□□□ 0.51
Hif1a-201ENSMUST00000021530 Carmil1Q6EDY6 1374 aa18.23■□□□□ 0.51
Hif1a-201ENSMUST00000021530 TchhA0A0B4J1F9 1599 aa18.21■□□□□ 0.51
Hif1a-201ENSMUST00000021530 Stag3O70576 1240 aa18.21■□□□□ 0.51
Hif1a-201ENSMUST00000021530 Fyco1Q8VDC1 1437 aa18.2■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Aebp1Q640N1 1128 aa18.19■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Kdm5bQ80Y84 1544 aa18.18■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Map4P27546 1125 aaKnown RBP18.16■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Ankrd26Q811D2 1581 aa18.16■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Erich3F6QRE9 1637 aa18.16■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Cnga1P29974 684 aa18.15■□□□□ 0.5
Hif1a-201ENSMUST00000021530 Efcab5A0JP43 1406 aa18.14■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Cux2P70298 1426 aa18.14■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Ofd1Q80Z25 1017 aa18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Phldb1Q6PDH0 1371 aaKnown RBP18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Pcf11G3X9Z4 1553 aa18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Ankrd36D3Z4K0 1415 aa18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Cwc22Q8C5N3 908 aaKnown RBP18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Hspa5P20029 655 aaKnown RBP18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Lemd3Q9WU40 921 aa18.13■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Fhad1A6PWD2 1420 aa18.12■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Neurod2Q62414 383 aa18.12■□□□□ 0.49
Hif1a-201ENSMUST00000021530 Rpap1Q80TE0 1409 aa18.11■□□□□ 0.49
Hif1a-201ENSMUST00000021530 UacaQ8CGB3 1411 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms